RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 KCNE4Q8WWG9 221 aa9.44□□□□□ -0.9
YBX3-212ENST00000542002 ZNF592Q92610 1267 aa9.44□□□□□ -0.9
YBX3-212ENST00000542002 CFAP36Q96G28 342 aa9.44□□□□□ -0.9
YBX3-212ENST00000542002 IL17FQ96PD4 163 aa9.44□□□□□ -0.9
YBX3-212ENST00000542002 LRRC1Q9BTT6 524 aa9.44□□□□□ -0.9
YBX3-212ENST00000542002 DDA1Q9BW61 102 aa9.44□□□□□ -0.9
YBX3-212ENST00000542002 B3GNT4Q9C0J1 378 aa9.44□□□□□ -0.9
YBX3-212ENST00000542002 TRIT1Q9H3H1 467 aaKnown RBP9.44□□□□□ -0.9
YBX3-212ENST00000542002 INTS10Q9NVR2 710 aaKnown RBP9.44□□□□□ -0.9
YBX3-212ENST00000542002 AKAP7Q9P0M2 348 aaPredicted RBP9.44□□□□□ -0.9
YBX3-212ENST00000542002 ZC3H7BQ9UGR2 993 aaKnown RBP9.44□□□□□ -0.9
YBX3-212ENST00000542002 TSR3Q9UJK0 312 aaKnown RBP9.44□□□□□ -0.9
YBX3-212ENST00000542002 TDRKHQ9Y2W6 561 aaKnown RBP9.44□□□□□ -0.9
YBX3-212ENST00000542002 URB1O60287 2271 aaKnown RBP9.44□□□□□ -0.9
YBX3-212ENST00000542002 TEX51A0A1B0GUA7 166 aa9.43□□□□□ -0.9
YBX3-212ENST00000542002 SMAPO00193 183 aa9.43□□□□□ -0.9
YBX3-212ENST00000542002 RRP8O43159 456 aaKnown RBP9.43□□□□□ -0.9
YBX3-212ENST00000542002 HCRTR1O43613 425 aa9.43□□□□□ -0.9
YBX3-212ENST00000542002 PIAS1O75925 651 aa9.43□□□□□ -0.9
YBX3-212ENST00000542002 TIAF1O95411 115 aa9.43□□□□□ -0.9
YBX3-212ENST00000542002 MATN4O95460 622 aa9.43□□□□□ -0.9
YBX3-212ENST00000542002 C1orf105O95561 183 aa9.43□□□□□ -0.9
YBX3-212ENST00000542002 TTC4O95801 387 aa9.43□□□□□ -0.9
YBX3-212ENST00000542002 APOA4P06727 396 aa9.43□□□□□ -0.9
YBX3-212ENST00000542002 EBLN1P0CF75 366 aa9.43□□□□□ -0.9
YBX3-212ENST00000542002 PVRP15151 417 aa9.43□□□□□ -0.9
YBX3-212ENST00000542002 ARL4CP56559 192 aa9.43□□□□□ -0.9
YBX3-212ENST00000542002 FOXM1Q08050 763 aa9.43□□□□□ -0.9
YBX3-212ENST00000542002 PDIA2Q13087 525 aaKnown RBP9.43□□□□□ -0.9
YBX3-212ENST00000542002 ZIC1Q15915 447 aa9.43□□□□□ -0.9
YBX3-212ENST00000542002 KYNUQ16719 465 aa9.43□□□□□ -0.9
YBX3-212ENST00000542002 DNTTIP2Q5QJE6 756 aaKnown RBP9.43□□□□□ -0.9
YBX3-212ENST00000542002 PLEKHS1Q5SXH7 462 aa9.43□□□□□ -0.9
YBX3-212ENST00000542002 DCAF12Q5T6F0 453 aa9.43□□□□□ -0.9
YBX3-212ENST00000542002 KLHL35Q6PF15 583 aa9.43□□□□□ -0.9
YBX3-212ENST00000542002 MAATS1Q7Z4T9 603 aa9.43□□□□□ -0.9
YBX3-212ENST00000542002 TRIM73Q86UV7 250 aa9.43□□□□□ -0.9
YBX3-212ENST00000542002 OOSP2Q86WS3 158 aa9.43□□□□□ -0.9
YBX3-212ENST00000542002 CNTN4Q8IWV2 1026 aa9.43□□□□□ -0.9
YBX3-212ENST00000542002 D2HGDHQ8N465 521 aa9.43□□□□□ -0.9
YBX3-212ENST00000542002 ZBTB2Q8N680 514 aa9.43□□□□□ -0.9
YBX3-212ENST00000542002 FBXO36Q8NEA4 188 aa9.43□□□□□ -0.9
YBX3-212ENST00000542002 NKD1Q969G9 470 aa9.43□□□□□ -0.9
YBX3-212ENST00000542002 ELMO2Q96JJ3 720 aa9.43□□□□□ -0.9
YBX3-212ENST00000542002 PANX3Q96QZ0 392 aa9.43□□□□□ -0.9
YBX3-212ENST00000542002 OR2A14Q96R47 310 aa9.43□□□□□ -0.9
YBX3-212ENST00000542002 OR6C1Q96RD1 312 aa9.43□□□□□ -0.9
YBX3-212ENST00000542002 NDNQ99608 321 aa9.43□□□□□ -0.9
YBX3-212ENST00000542002 AARSD1Q9BTE6 412 aaKnown RBP9.43□□□□□ -0.9
YBX3-212ENST00000542002 TSSK1BQ9BXA7 367 aa9.43□□□□□ -0.9
YBX3-212ENST00000542002 DPH1Q9BZG8 443 aa9.43□□□□□ -0.9
YBX3-212ENST00000542002 KLHL25Q9H0H3 589 aa9.43□□□□□ -0.9
YBX3-212ENST00000542002 PRORYQ9H606 182 aa9.43□□□□□ -0.9
YBX3-212ENST00000542002 CPNE5Q9HCH3 593 aa9.43□□□□□ -0.9
YBX3-212ENST00000542002 ACTR10Q9NZ32 417 aa9.43□□□□□ -0.9
YBX3-212ENST00000542002 MOCS1Q9NZB8 636 aa9.43□□□□□ -0.9
YBX3-212ENST00000542002 WHRNQ9P202 907 aa9.43□□□□□ -0.9
YBX3-212ENST00000542002 POLG2Q9UHN1 485 aa9.43□□□□□ -0.9
YBX3-212ENST00000542002 PILRAQ9UKJ1 303 aa9.43□□□□□ -0.9
YBX3-212ENST00000542002 POMT2Q9UKY4 750 aa9.43□□□□□ -0.9
YBX3-212ENST00000542002 PSAT1Q9Y617 370 aa9.43□□□□□ -0.9
YBX3-212ENST00000542002 ITPR1Q14643 2758 aa9.42□□□□□ -0.9
YBX3-212ENST00000542002 ESYT3A0FGR9 886 aa9.42□□□□□ -0.9
YBX3-212ENST00000542002 GSAPA4D1B5 854 aa9.42□□□□□ -0.9
YBX3-212ENST00000542002 TLCD2A6NGC4 264 aa9.42□□□□□ -0.9
YBX3-212ENST00000542002 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.42□□□□□ -0.9
YBX3-212ENST00000542002 F8W8V4 182 aa9.42□□□□□ -0.9
YBX3-212ENST00000542002 H3BMM5 538 aa9.42□□□□□ -0.9
YBX3-212ENST00000542002 KPNA5O15131 536 aa9.42□□□□□ -0.9
YBX3-212ENST00000542002 POLR1CO15160 346 aaPredicted RBP9.42□□□□□ -0.9
YBX3-212ENST00000542002 CTSBP07858 339 aa9.42□□□□□ -0.9
YBX3-212ENST00000542002 CHRM5P08912 532 aaPredicted RBP9.42□□□□□ -0.9
YBX3-212ENST00000542002 FGF5P12034 268 aa9.42□□□□□ -0.9
YBX3-212ENST00000542002 ST6GAL1P15907 406 aa9.42□□□□□ -0.9
YBX3-212ENST00000542002 PKLRP30613 574 aa9.42□□□□□ -0.9
YBX3-212ENST00000542002 BDKRB1P46663 353 aa9.42□□□□□ -0.9
YBX3-212ENST00000542002 CDKN2DP55273 166 aa9.42□□□□□ -0.9
YBX3-212ENST00000542002 YBX1P67809 324 aaKnown RBP9.42□□□□□ -0.9
YBX3-212ENST00000542002 HSD11B2P80365 405 aa9.42□□□□□ -0.9
YBX3-212ENST00000542002 CUL1Q13616 776 aa9.42□□□□□ -0.9
YBX3-212ENST00000542002 COL9A2Q14055 689 aaPredicted RBP9.42□□□□□ -0.9
YBX3-212ENST00000542002 GPR19Q15760 415 aa9.42□□□□□ -0.9
YBX3-212ENST00000542002 KLHL38Q2WGJ6 581 aa9.42□□□□□ -0.9
YBX3-212ENST00000542002 RBM20Q5T481 1227 aaKnown RBP9.42□□□□□ -0.9
YBX3-212ENST00000542002 PWWP2BQ6NUJ5 590 aa9.42□□□□□ -0.9
YBX3-212ENST00000542002 UNC5DQ6UXZ4 953 aa9.42□□□□□ -0.9
YBX3-212ENST00000542002 LRRC69Q6ZNQ3 347 aa9.42□□□□□ -0.9
YBX3-212ENST00000542002 VASH2Q86V25 355 aa9.42□□□□□ -0.9
YBX3-212ENST00000542002 RASGRP3Q8IV61 690 aa9.42□□□□□ -0.9
YBX3-212ENST00000542002 LMNTD2Q8IXW0 634 aa9.42□□□□□ -0.9
YBX3-212ENST00000542002 NOA1Q8NC60 698 aaKnown RBP9.42□□□□□ -0.9
YBX3-212ENST00000542002 DENND1AQ8TEH3 1009 aa9.42□□□□□ -0.9
YBX3-212ENST00000542002 UBXN4Q92575 508 aa9.42□□□□□ -0.9
YBX3-212ENST00000542002 LRRC39Q96DD0 335 aa9.42□□□□□ -0.9
YBX3-212ENST00000542002 CERS2Q96G23 380 aa9.42□□□□□ -0.9
YBX3-212ENST00000542002 TRAPPC9Q96Q05 1148 aa9.42□□□□□ -0.9
YBX3-212ENST00000542002 GPR21Q99679 349 aa9.42□□□□□ -0.9
YBX3-212ENST00000542002 FAM167BQ9BTA0 163 aa9.42□□□□□ -0.9
YBX3-212ENST00000542002 NAT9Q9BTE0 207 aa9.42□□□□□ -0.9
YBX3-212ENST00000542002 PITPNM3Q9BZ71 974 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms