RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 IL25Q9H293 177 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 WDR55Q9H6Y2 383 aaPredicted RBP10.56□□□□□ -0.72
GABRB3-204ENST00000541819 TRPV4Q9HBA0 871 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 RUVBL1Q9Y265 456 aaKnown RBP10.56□□□□□ -0.72
GABRB3-204ENST00000541819 CFL2Q9Y281 166 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 PI15O43692 258 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 SCGB2A1O75556 95 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 AGR2O95994 175 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 GOT2P00505 430 aaKnown RBP10.56□□□□□ -0.72
GABRB3-204ENST00000541819 GJB1P08034 283 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 ANKRD23Q86SG2 305 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 KCT2Q8NC54 265 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 GSTCDQ8NEC7 633 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 RELTQ969Z4 430 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 C8orf48Q96LL4 319 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 WDR18Q9BV38 432 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 ERVK-5Q9HDB9 667 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 KLRF1Q9NZS2 232 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 EIF3KQ9UBQ5 218 aaKnown RBP10.56□□□□□ -0.72
GABRB3-204ENST00000541819 MLXQ9UH92 298 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 C14orf166Q9Y224 244 aaKnown RBP10.56□□□□□ -0.72
GABRB3-204ENST00000541819 ALG5Q9Y673 324 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 A0A1W2PRQ8 180 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 E7EQ34 232 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 CYP3A5P20815 502 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 GADD45AP24522 165 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 CCR8P51685 355 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 TARDBPQ13148 414 aaKnown RBP eCLIP10.56□□□□□ -0.72
GABRB3-204ENST00000541819 ENPP2Q13822 863 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 OGFRL1Q5TC84 451 aaPredicted RBP10.56□□□□□ -0.72
GABRB3-204ENST00000541819 USP43Q70EL4 1123 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 ZSCAN1Q8NBB4 408 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 MKL1Q969V6 931 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 CAMK1GQ96NX5 476 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 CENPMQ9NSP4 180 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 DKK3Q9UBP4 350 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 DKKL1Q9UK85 242 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 MAU2Q9Y6X3 613 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 E7ENX8 843 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 C2P06681 752 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 GPIP06744 558 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 NUDT17P0C025 328 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 ELNP15502 786 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 GJA8P48165 433 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 CLCN4P51793 760 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 KCNJ2P63252 427 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 SSX6Q7RTT6 188 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 IQCHQ86VS3 1027 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 AVL9Q8NBF6 648 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 DENND1AQ8TEH3 1009 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 HMCESQ96FZ2 354 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 SHDQ96IW2 340 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 CIB1Q99828 191 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 C11orf84Q9BUA3 381 aaPredicted RBP10.56□□□□□ -0.72
GABRB3-204ENST00000541819 GTPBP2Q9BX10 602 aaKnown RBP10.56□□□□□ -0.72
GABRB3-204ENST00000541819 CXCR6O00574 342 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 COQ9O75208 318 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 TRAPPC6AO75865 159 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 CLPXO76031 633 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 MT-CYBP00156 380 aaPredicted RBP10.56□□□□□ -0.72
GABRB3-204ENST00000541819 POU2F1P14859 743 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 LRRC32Q14392 662 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 TAF1AQ15573 450 aaPredicted RBP10.56□□□□□ -0.72
GABRB3-204ENST00000541819 MBOAT1Q6ZNC8 495 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 AMZ2Q86W34 360 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 XYLT1Q86Y38 959 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 SLC44A3Q8N4M1 653 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 GRHL3Q8TE85 626 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 NDC1Q9BTX1 674 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 SLC25A51Q9H1U9 297 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 CPQQ9Y646 472 aa10.56□□□□□ -0.72
GABRB3-204ENST00000541819 PCP4L1A6NKN8 68 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 A8MUA0 341 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 KCNU1A8MYU2 1149 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 SCDO00767 359 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 ENPP3O14638 875 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 IL33O95760 270 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 CSN2P05814 226 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 EDNRAP25101 427 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 ACSL1P33121 698 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 RORCP51449 518 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 ZACNQ401N2 412 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 DUSP28Q4G0W2 176 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 EEF1DP3Q658K8 133 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 ENPP7Q6UWV6 458 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 ZNF101Q8IZC7 436 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 PGAM4Q8N0Y7 254 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 CLIP4Q8N3C7 705 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 TMEM156Q8N614 296 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 PRELID2Q8N945 189 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 OR2L2Q8NH16 312 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 ZFP3Q96NJ6 502 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 SLC17A7Q9P2U7 560 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 PLLPQ9Y342 182 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 A0A1B0GVC2 190 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 A0A1W2PPM1 405 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 FABP12A6NFH5 140 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 FSCN2O14926 492 aa10.55□□□□□ -0.72
GABRB3-204ENST00000541819 AZGP1P25311 298 aaKnown RBP10.55□□□□□ -0.72
GABRB3-204ENST00000541819 NSG1P42857 185 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms