RNA–Protein interactions for RNA: ENST00000541354.5

SPOCK3-226, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 2 BASIC

Gene SPOCK3, Length 2,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-226ENST00000541354 CMTM6Q9NX76 183 aa14.35□□□□□ -0.11
SPOCK3-226ENST00000541354 ZIM2Q9NZV7 527 aa14.35□□□□□ -0.11
SPOCK3-226ENST00000541354 TMPRSS11EQ9UL52 423 aa14.35□□□□□ -0.11
SPOCK3-226ENST00000541354 CNOT6Q9ULM6 557 aaKnown RBP14.35□□□□□ -0.11
SPOCK3-226ENST00000541354 A0A1B0GTL3 188 aa14.35□□□□□ -0.11
SPOCK3-226ENST00000541354 GIPC1O14908 333 aa14.35□□□□□ -0.11
SPOCK3-226ENST00000541354 CLPTM1O96005 669 aa14.35□□□□□ -0.11
SPOCK3-226ENST00000541354 PRR23BQ6ZRT6 265 aa14.35□□□□□ -0.11
SPOCK3-226ENST00000541354 ERN2Q76MJ5 926 aaKnown RBP14.35□□□□□ -0.11
SPOCK3-226ENST00000541354 MFSD2AQ8NA29 543 aa14.35□□□□□ -0.11
SPOCK3-226ENST00000541354 FAM131CQ96AQ9 280 aa14.35□□□□□ -0.11
SPOCK3-226ENST00000541354 KCNA7Q96RP8 456 aa14.35□□□□□ -0.11
SPOCK3-226ENST00000541354 SH3GL3Q99963 347 aa14.35□□□□□ -0.11
SPOCK3-226ENST00000541354 NR5A2O00482 541 aa14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 SLCO2B1O94956 709 aa14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 OTCP00480 354 aa14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 ADRB3P13945 408 aa14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 ATP6V1B2P21281 511 aa14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 PRLHRP49683 370 aa14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 LSAMPQ13449 338 aa14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 CAMK2GQ13555 558 aaPredicted RBP14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 VPS26BQ4G0F5 336 aa14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 C6orf52Q5T4I8 152 aa14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 SERPINA13PQ6UXR4 307 aa14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 DDIASQ8IXT1 998 aa14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 FBXO15Q8NCQ5 510 aaPredicted RBP14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 PAPD5Q8NDF8 572 aaKnown RBP14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 ASZ1Q8WWH4 475 aa14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 ARRDC3Q96B67 414 aa14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 MSANTD3Q96H12 275 aa14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 LINC00615Q96LM1 132 aaPredicted RBP14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 TRIM4Q9C037 500 aa14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 RBM38Q9H0Z9 239 aaKnown RBP14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 PTGDR2Q9Y5Y4 395 aa14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 COL4A2P08572 1712 aa14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 TSPAN6O43657 245 aa14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 TRIM16O95361 564 aa14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 LINC00032P0C843 101 aa14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 CA5AP35218 305 aa14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 POLE2P56282 527 aa14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 ERVK-8P63133 956 aa14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 PCDH1Q08174 1060 aa14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 MAP7D1Q3KQU3 841 aa14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 GPRIN3Q6ZVF9 776 aa14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 LRRC70Q7Z2Q7 622 aa14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 LKAAEAR1Q8TD35 194 aa14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 TMEM125Q96AQ2 219 aa14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 MSLNLQ96KJ4 702 aa14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 HGH1Q9BTY7 390 aa14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 RSPH9Q9H1X1 276 aaPredicted RBP14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 VCX3AQ9NNX9 186 aa14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 RIC8BQ9NVN3 520 aa14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 SERTM1A2A2V5 107 aa14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 TBC1D3BA6NDS4 549 aa14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 OTOL1A6NHN0 477 aaPredicted RBP14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 GFYI3L273 518 aa14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 KPNA3O00505 521 aaPredicted RBP14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 SPINT1O43278 529 aa14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 ATXN3P54252 364 aaPredicted RBP14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 DYNC1I2Q13409 638 aaKnown RBP14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 LAYNQ6UX15 382 aa14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 SATL1Q86VE3 508 aa14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 GALNT4Q8N4A0 578 aa14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 SNX31Q8N9S9 440 aa14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 CANT1Q8WVQ1 401 aa14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 CNBD2Q96M20 576 aa14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 NTMT1Q9BV86 223 aa14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 ANKRD60Q9BZ19 345 aa14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 SLC29A3Q9BZD2 475 aa14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 CD244Q9BZW8 370 aa14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 SARS2Q9NP81 518 aaKnown RBP14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 SEMA4BQ9NPR2 832 aaPredicted RBP14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 PRSS16Q9NQE7 514 aa14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 TRPS1Q9UHF7 1281 aa14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 PCDHGB4Q9UN71 923 aa14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 RNF11Q9Y3C5 154 aa14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 PCDHGB5Q9Y5G0 923 aa14.34□□□□□ -0.11
SPOCK3-226ENST00000541354 DOCK8Q8NF50 2099 aa14.33□□□□□ -0.11
SPOCK3-226ENST00000541354 C17orf113A0A1B0GUU1 675 aa14.33□□□□□ -0.12
SPOCK3-226ENST00000541354 GPR89AB7ZAQ6 455 aa14.33□□□□□ -0.12
SPOCK3-226ENST00000541354 LINC01565O15544 149 aa14.33□□□□□ -0.12
SPOCK3-226ENST00000541354 VEGFDO43915 354 aa14.33□□□□□ -0.12
SPOCK3-226ENST00000541354 KATNA1O75449 491 aa14.33□□□□□ -0.12
SPOCK3-226ENST00000541354 GPIP06744 558 aa14.33□□□□□ -0.12
SPOCK3-226ENST00000541354 ANXA5P08758 320 aa14.33□□□□□ -0.12
SPOCK3-226ENST00000541354 GPR89BP0CG08 455 aa14.33□□□□□ -0.12
SPOCK3-226ENST00000541354 CCR7P32248 378 aa14.33□□□□□ -0.12
SPOCK3-226ENST00000541354 EEFSECP57772 596 aaKnown RBP14.33□□□□□ -0.12
SPOCK3-226ENST00000541354 INPP5AQ14642 412 aa14.33□□□□□ -0.12
SPOCK3-226ENST00000541354 NHSL2Q5HYW2 709 aa14.33□□□□□ -0.12
SPOCK3-226ENST00000541354 FAM219BQ5XKK7 198 aa14.33□□□□□ -0.12
SPOCK3-226ENST00000541354 Q6ZVL8 140 aa14.33□□□□□ -0.12
SPOCK3-226ENST00000541354 DPP10Q8N608 796 aa14.33□□□□□ -0.12
SPOCK3-226ENST00000541354 ASB11Q8WXH4 323 aa14.33□□□□□ -0.12
SPOCK3-226ENST00000541354 AP2M1Q96CW1 435 aa14.33□□□□□ -0.12
SPOCK3-226ENST00000541354 LRCH3Q96II8 777 aa14.33□□□□□ -0.12
SPOCK3-226ENST00000541354 RIOK2Q9BVS4 552 aaKnown RBP14.33□□□□□ -0.12
SPOCK3-226ENST00000541354 PARVBQ9HBI1 364 aa14.33□□□□□ -0.12
SPOCK3-226ENST00000541354 AGPAT4Q9NRZ5 378 aa14.33□□□□□ -0.12
SPOCK3-226ENST00000541354 FNDC3AQ9Y2H6 1198 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms