RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 TMC8Q8IU68 726 aa14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 SRFBP1Q8NEF9 429 aaKnown RBP14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 TRIM2Q9C040 744 aa14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 POLR3BQ9NW08 1133 aaPredicted RBP14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 PCDHGB1Q9Y5G3 927 aa14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 PCDHGA11Q9Y5H2 935 aa14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 MAFBQ9Y5Q3 323 aaPredicted RBP14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 KANTRA0A1W2PQU2 76 aa14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 PRORSD1PA6NEY8 169 aa14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 BOLA2-SMG1P6H3BVE0 249 aa14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 ZNF701M0R085 212 aaPredicted RBP14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 TLR4O00206 839 aa14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 OR10H2O60403 315 aa14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 MT-CYBP00156 380 aaPredicted RBP14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 GSTM3P21266 225 aa14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 WEE1P30291 646 aa14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 CHIT1Q13231 466 aa14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 DSC3Q14574 896 aa14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 TCEAL5Q5H9L2 206 aa14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 KIAA1614Q5VZ46 1190 aa14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 KLHL35Q6PF15 583 aa14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 ANKRD13BQ86YJ7 626 aa14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 PLCZ1Q86YW0 608 aa14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 TOMM5Q8N4H5 51 aa14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 CERS5Q8N5B7 392 aa14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 PYURFQ96I23 114 aa14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 MCCC1Q96RQ3 725 aaPredicted RBP14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 SPON1Q9HCB6 807 aa14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 CCM2LQ9NUG4 571 aaPredicted RBP14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 K7EPI3 171 aa14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 ATG13O75143 517 aa14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 SLC25A12O75746 678 aa14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 OAS1P00973 400 aaKnown RBP14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 SAGP10523 405 aaPredicted RBP14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 ZNF132P52740 706 aa14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 SLC25A11Q02978 314 aaKnown RBP14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 FNDC3BQ53EP0 1204 aaKnown RBP14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 JAZF1Q86VZ6 243 aa14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 ANKFN1Q8N957 763 aa14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 GRIN3AQ8TCU5 1115 aa14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 DENND1AQ8TEH3 1009 aa14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 PDZD7Q9H5P4 517 aa14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 SPATA7Q9P0W8 599 aa14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 MALT1Q9UDY8 824 aa14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 ZNF487B1APH4 448 aa14.69□□□□□ -0.06
SMARCA4-207ENST00000541122 CHP2O43745 196 aa14.69□□□□□ -0.06
SMARCA4-207ENST00000541122 LAMP2P13473 410 aa14.69□□□□□ -0.06
SMARCA4-207ENST00000541122 IL7RP16871 459 aa14.69□□□□□ -0.06
SMARCA4-207ENST00000541122 ECHS1P30084 290 aa14.69□□□□□ -0.06
SMARCA4-207ENST00000541122 KLF1Q13351 362 aaPredicted RBP14.69□□□□□ -0.06
SMARCA4-207ENST00000541122 HEPACAMQ14CZ8 416 aa14.69□□□□□ -0.06
SMARCA4-207ENST00000541122 MEP1AQ16819 746 aa14.69□□□□□ -0.06
SMARCA4-207ENST00000541122 NCBP2-AS2Q69YL0 99 aa14.69□□□□□ -0.06
SMARCA4-207ENST00000541122 PM20D2Q8IYS1 436 aa14.69□□□□□ -0.06
SMARCA4-207ENST00000541122 NATD1Q8N6N6 113 aa14.69□□□□□ -0.06
SMARCA4-207ENST00000541122 ARRDC4Q8NCT1 418 aa14.69□□□□□ -0.06
SMARCA4-207ENST00000541122 GEMIN6Q8WXD5 167 aaKnown RBP14.69□□□□□ -0.06
SMARCA4-207ENST00000541122 FNIP2Q9P278 1114 aa14.69□□□□□ -0.06
SMARCA4-207ENST00000541122 HSPB11Q9Y547 144 aa14.69□□□□□ -0.06
SMARCA4-207ENST00000541122 ABCC6O95255 1503 aa14.69□□□□□ -0.06
SMARCA4-207ENST00000541122 SMIM28A0A1B0GU29 152 aa14.69□□□□□ -0.06
SMARCA4-207ENST00000541122 ABHD14A-ACY1A0A1B0GW23 586 aa14.69□□□□□ -0.06
SMARCA4-207ENST00000541122 MAGEB3O15480 346 aa14.69□□□□□ -0.06
SMARCA4-207ENST00000541122 HMGN1P05114 100 aa14.69□□□□□ -0.06
SMARCA4-207ENST00000541122 SLC35G4P0C7Q5 338 aa14.69□□□□□ -0.06
SMARCA4-207ENST00000541122 MYCLP1P12525 358 aaPredicted RBP14.69□□□□□ -0.06
SMARCA4-207ENST00000541122 POU2F1P14859 743 aa14.69□□□□□ -0.06
SMARCA4-207ENST00000541122 ABHD18Q0P651 414 aa14.69□□□□□ -0.06
SMARCA4-207ENST00000541122 SEMA3AQ14563 771 aa14.69□□□□□ -0.06
SMARCA4-207ENST00000541122 TSTQ16762 297 aaKnown RBP14.69□□□□□ -0.06
SMARCA4-207ENST00000541122 CEP295NLQ96MC4 621 aa14.69□□□□□ -0.06
SMARCA4-207ENST00000541122 FBXL18Q96ME1 805 aa14.69□□□□□ -0.06
SMARCA4-207ENST00000541122 CENPBD1B2RD01 187 aa14.69□□□□□ -0.06
SMARCA4-207ENST00000541122 ITGA3P26006 1051 aa14.69□□□□□ -0.06
SMARCA4-207ENST00000541122 AP1S2P56377 157 aa14.69□□□□□ -0.06
SMARCA4-207ENST00000541122 LINGO2Q7L985 606 aa14.69□□□□□ -0.06
SMARCA4-207ENST00000541122 DCBLD1Q8N8Z6 715 aa14.69□□□□□ -0.06
SMARCA4-207ENST00000541122 CEP76Q8TAP6 659 aa14.69□□□□□ -0.06
SMARCA4-207ENST00000541122 COPS5Q92905 334 aa14.69□□□□□ -0.06
SMARCA4-207ENST00000541122 RHBGQ9H310 441 aa14.69□□□□□ -0.06
SMARCA4-207ENST00000541122 C14orf105Q9NVL8 296 aa14.69□□□□□ -0.06
SMARCA4-207ENST00000541122 THG1LQ9NWX6 298 aaKnown RBP14.69□□□□□ -0.06
SMARCA4-207ENST00000541122 RDH8Q9NYR8 311 aa14.69□□□□□ -0.06
SMARCA4-207ENST00000541122 ASF1AQ9Y294 204 aa14.69□□□□□ -0.06
SMARCA4-207ENST00000541122 ST14Q9Y5Y6 855 aa14.69□□□□□ -0.06
SMARCA4-207ENST00000541122 PTPRJQ12913 1337 aa14.69□□□□□ -0.06
SMARCA4-207ENST00000541122 TRAV19A0A0A6YYK7 116 aa14.69□□□□□ -0.06
SMARCA4-207ENST00000541122 A0A1W2PQH9 124 aa14.69□□□□□ -0.06
SMARCA4-207ENST00000541122 E7ESA3 106 aa14.69□□□□□ -0.06
SMARCA4-207ENST00000541122 NDUFB5O43674 189 aa14.69□□□□□ -0.06
SMARCA4-207ENST00000541122 XKP51811 444 aa14.69□□□□□ -0.06
SMARCA4-207ENST00000541122 DAOAP59103 153 aa14.69□□□□□ -0.06
SMARCA4-207ENST00000541122 DEFA5Q01523 94 aa14.69□□□□□ -0.06
SMARCA4-207ENST00000541122 RAPSNQ13702 412 aa14.69□□□□□ -0.06
SMARCA4-207ENST00000541122 ZNF234Q14588 700 aa14.69□□□□□ -0.06
SMARCA4-207ENST00000541122 ATP13A5Q4VNC0 1218 aa14.69□□□□□ -0.06
SMARCA4-207ENST00000541122 HACD2Q6Y1H2 254 aa14.69□□□□□ -0.06
SMARCA4-207ENST00000541122 SLC43A3Q8NBI5 491 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms