RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 GLUD1P00367 558 aa10.15□□□□□ -0.78
CDC42SE1-207ENST00000540998 RPL9P32969 192 aaKnown RBP10.15□□□□□ -0.78
CDC42SE1-207ENST00000540998 DGKEP52429 567 aa10.15□□□□□ -0.78
CDC42SE1-207ENST00000540998 TUSC3Q13454 348 aa10.15□□□□□ -0.78
CDC42SE1-207ENST00000540998 PRSS36Q5K4E3 855 aa10.15□□□□□ -0.78
CDC42SE1-207ENST00000540998 RBM48Q5RL73 367 aaKnown RBP10.15□□□□□ -0.78
CDC42SE1-207ENST00000540998 LDLRAD1Q5T700 205 aa10.15□□□□□ -0.78
CDC42SE1-207ENST00000540998 SBSNQ6UWP8 590 aa10.15□□□□□ -0.78
CDC42SE1-207ENST00000540998 RNF19BQ6ZMZ0 732 aa10.15□□□□□ -0.78
CDC42SE1-207ENST00000540998 ADCK1Q86TW2 530 aa10.15□□□□□ -0.78
CDC42SE1-207ENST00000540998 CHPFQ8IZ52 775 aa10.15□□□□□ -0.78
CDC42SE1-207ENST00000540998 CDC26Q8NHZ8 85 aa10.15□□□□□ -0.78
CDC42SE1-207ENST00000540998 WBP2Q969T9 261 aa10.15□□□□□ -0.78
CDC42SE1-207ENST00000540998 BTN2A3PQ96KV6 586 aa10.15□□□□□ -0.78
CDC42SE1-207ENST00000540998 C1orf74Q96LT6 269 aa10.15□□□□□ -0.78
CDC42SE1-207ENST00000540998 OR52E6Q96RD3 313 aa10.15□□□□□ -0.78
CDC42SE1-207ENST00000540998 CINPQ9BW66 212 aaPredicted RBP10.15□□□□□ -0.78
CDC42SE1-207ENST00000540998 BTBD2Q9BX70 525 aa10.15□□□□□ -0.78
CDC42SE1-207ENST00000540998 PDFQ9HBH1 243 aa10.15□□□□□ -0.78
CDC42SE1-207ENST00000540998 ZBTB20Q9HC78 741 aaPredicted RBP10.15□□□□□ -0.78
CDC42SE1-207ENST00000540998 GKN1Q9NS71 199 aa10.15□□□□□ -0.78
CDC42SE1-207ENST00000540998 GPRC5BQ9NZH0 403 aa10.15□□□□□ -0.78
CDC42SE1-207ENST00000540998 ZNF229Q9UJW7 825 aa10.15□□□□□ -0.78
CDC42SE1-207ENST00000540998 INTS6Q9UL03 887 aaKnown RBP10.15□□□□□ -0.78
CDC42SE1-207ENST00000540998 GIT1Q9Y2X7 761 aa10.15□□□□□ -0.78
CDC42SE1-207ENST00000540998 PKP3Q9Y446 797 aa10.15□□□□□ -0.78
CDC42SE1-207ENST00000540998 TULP3O75386 442 aa10.15□□□□□ -0.78
CDC42SE1-207ENST00000540998 CREG1O75629 220 aa10.15□□□□□ -0.78
CDC42SE1-207ENST00000540998 PGRP06401 933 aa10.15□□□□□ -0.78
CDC42SE1-207ENST00000540998 SPNP16150 400 aa10.15□□□□□ -0.78
CDC42SE1-207ENST00000540998 AQP1P29972 269 aa10.15□□□□□ -0.78
CDC42SE1-207ENST00000540998 CLK3P49761 638 aaKnown RBP10.15□□□□□ -0.78
CDC42SE1-207ENST00000540998 CPT1AP50416 773 aa10.15□□□□□ -0.78
CDC42SE1-207ENST00000540998 FXNQ16595 210 aa10.15□□□□□ -0.78
CDC42SE1-207ENST00000540998 ZNF691Q5VV52 312 aa10.15□□□□□ -0.78
CDC42SE1-207ENST00000540998 TTC23Q5W5X9 447 aa10.15□□□□□ -0.78
CDC42SE1-207ENST00000540998 AFTPHQ6ULP2 937 aa10.15□□□□□ -0.78
CDC42SE1-207ENST00000540998 RSPO2Q6UXX9 243 aaPredicted RBP10.15□□□□□ -0.78
CDC42SE1-207ENST00000540998 AHSA2Q719I0 299 aa10.15□□□□□ -0.78
CDC42SE1-207ENST00000540998 LSRQ86X29 649 aaPredicted RBP10.15□□□□□ -0.78
CDC42SE1-207ENST00000540998 RGL4Q8IZJ4 473 aa10.15□□□□□ -0.78
CDC42SE1-207ENST00000540998 ZCCHC7Q8N3Z6 543 aaKnown RBP10.15□□□□□ -0.78
CDC42SE1-207ENST00000540998 DPP10Q8N608 796 aa10.15□□□□□ -0.78
CDC42SE1-207ENST00000540998 ARL10Q8N8L6 244 aa10.15□□□□□ -0.78
CDC42SE1-207ENST00000540998 TERB1Q8NA31 727 aa10.15□□□□□ -0.78
CDC42SE1-207ENST00000540998 MAGED4Q96JG8 741 aa10.15□□□□□ -0.78
CDC42SE1-207ENST00000540998 ZNF382Q96SR6 550 aa10.15□□□□□ -0.78
CDC42SE1-207ENST00000540998 MROQ9BYG7 248 aa10.15□□□□□ -0.78
CDC42SE1-207ENST00000540998 DPY30Q9C005 99 aa10.15□□□□□ -0.78
CDC42SE1-207ENST00000540998 CIPCQ9C0C6 399 aa10.15□□□□□ -0.78
CDC42SE1-207ENST00000540998 HEBP1Q9NRV9 189 aa10.15□□□□□ -0.78
CDC42SE1-207ENST00000540998 RAI2Q9Y5P3 530 aa10.15□□□□□ -0.78
CDC42SE1-207ENST00000540998 PLXNA4Q9HCM2 1894 aa10.15□□□□□ -0.79
CDC42SE1-207ENST00000540998 MICAL3Q7RTP6 2002 aa10.15□□□□□ -0.79
CDC42SE1-207ENST00000540998 INSIG1O15503 277 aa10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 CYP11A1P05108 521 aa10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 TACR2P21452 398 aa10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 IGFBP5P24593 272 aa10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 GTF2E2P29084 291 aaKnown RBP10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 NR4A2P43354 598 aa10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 GATMP50440 423 aa10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 COLEC12Q5KU26 742 aa10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 CCDC71Q8IV32 467 aaPredicted RBP10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 DENND1CQ8IV53 801 aa10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 FAM83FQ8NEG4 500 aaPredicted RBP10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 PPP1R2P1Q96PQ5 205 aa10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 NUSAP1Q9BXS6 441 aaKnown RBP10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 TM6SF2Q9BZW4 377 aa10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 SCUBE2Q9NQ36 999 aa10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 SIRT5Q9NXA8 310 aa10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 FAM8A1Q9UBU6 413 aa10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 SCML2Q9UQR0 700 aa10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 NINQ8N4C6 2090 aa10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 IGLV3-10A0A075B6K4 115 aa10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 UNCXA6NJT0 531 aa10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 LOC730098B7Z3J9 87 aa10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 KPNA4O00629 521 aaPredicted RBP10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 STX16O14662 325 aa10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 PER2O15055 1255 aa10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 STX7O15400 261 aaKnown RBP10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 FFAR2O15552 330 aa10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 SSX4O60224 188 aa10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 MYO1DO94832 1006 aa10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 GJB5O95377 273 aa10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 DAPP51397 102 aa10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 CLCN7P51798 805 aa10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 RPS3AP61247 264 aaKnown RBP10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 EPS8Q12929 822 aa10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 ZNF846Q147U1 533 aa10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 SF3B4Q15427 424 aaKnown RBP eCLIP10.14□□□□□ -0.794e-7■■■□□ 16.7
CDC42SE1-207ENST00000540998 MAPRE1Q15691 268 aaKnown RBP10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 KCNJ8Q15842 424 aa10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 SPATC1Q76KD6 591 aa10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 BEND5Q7L4P6 421 aa10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 CLIP4Q8N3C7 705 aa10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 ATP6V0D2Q8N8Y2 350 aa10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 RORBQ92753 470 aa10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 SUSD3Q96L08 255 aa10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 CORO1BQ9BR76 489 aa10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 EBPLQ9BY08 206 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms