RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 SLC22A14Q9Y267 594 aa11.96□□□□□ -0.49
AP003559.1-201ENST00000540906 CA5BQ9Y2D0 317 aa11.96□□□□□ -0.49
AP003559.1-201ENST00000540906 PSMD12O00232 456 aaPredicted RBP11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 CHUKO15111 745 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 SCAMP1O15126 338 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 VEGFDO43915 354 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 ENTPD5O75356 428 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 PDE5AO76074 875 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 OTCP00480 354 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 LBPP18428 481 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 IMPA1P29218 277 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 HNRNPH1P31943 449 aaKnown RBP11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 ERFP50548 548 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 NAA20P61599 178 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 GTF2H3Q13889 308 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 CYLC2Q14093 348 aaPredicted RBP11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 FASTKQ14296 549 aaKnown RBP11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 HERC3Q15034 1050 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 CDKL4Q5MAI5 379 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 SDE2Q6IQ49 451 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 ULK2Q8IYT8 1036 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 RNF175Q8N4F7 328 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 FLCNQ8NFG4 579 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 MAFAQ8NHW3 353 aaPredicted RBP11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 RP9Q8TA86 221 aaKnown RBP11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 MCOLN3Q8TDD5 553 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 FBXL8Q96CD0 374 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 SIPA1Q96FS4 1042 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 TEX37Q96LM6 180 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 OR4K3Q96R72 315 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 RTKNQ9BST9 563 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 NTMT1Q9BV86 223 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 ZDHHC5Q9C0B5 715 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 ZCCHC2Q9C0B9 1178 aaKnown RBP11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 C1orf21Q9H246 121 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 SLC32A1Q9H598 525 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 INTS7Q9NVH2 962 aaKnown RBP11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 CCDC167Q9P0B6 97 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 BAIAP2L1Q9UHR4 511 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 NDRG2Q9UN36 371 aaKnown RBP11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 PLEKHM1Q9Y4G2 1056 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 ANGPTL3Q9Y5C1 460 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 H3BM21 787 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 SLC22A2O15244 555 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 LATO43561 262 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 C1orf105O95561 183 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 HIST1H2AGP0C0S8 130 aaPredicted RBP11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 THRAP10827 490 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 EPB42P16452 691 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 CD22P20273 847 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 HIST1H2ADP20671 130 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 ACADLP28330 430 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 TRIM23P36406 574 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 ZFP36L2P47974 494 aaKnown RBP11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 NUDT2P50583 147 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 MRPS21P82921 87 aaKnown RBP11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 SGO1Q5FBB7 561 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 KIAA1324Q6UXG2 1013 aaKnown RBP11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 LRRC70Q7Z2Q7 622 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 DEFB107AQ8IZN7 70 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 KIRREL3Q8IZU9 778 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 OR2L2Q8NH16 312 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 FAM3CQ92520 227 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 MCUR1Q96AQ8 359 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 HIST1H2AHQ96KK5 128 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 HIST1H2AJQ99878 128 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 H2AFJQ9BTM1 129 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 SLC17A9Q9BYT1 436 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 TRIM54Q9BYV2 358 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 OR52A5Q9H2C5 316 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 KLQ9UEF7 1012 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 TRPS1Q9UHF7 1281 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 SLC7A8Q9UHI5 535 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 SH2B3Q9UQQ2 575 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 GPR45Q9Y5Y3 372 aa11.95□□□□□ -0.5
AP003559.1-201ENST00000540906 TBC1D3DA0A087WVF3 549 aa11.94□□□□□ -0.5
AP003559.1-201ENST00000540906 TBC1D3IA0A087WXS9 549 aa11.94□□□□□ -0.5
AP003559.1-201ENST00000540906 TBC1D3EA0A087X179 549 aa11.94□□□□□ -0.5
AP003559.1-201ENST00000540906 TBC1D3KA0A087X1G2 549 aa11.94□□□□□ -0.5
AP003559.1-201ENST00000540906 TCRBV21S2A2A0A5A6 115 aa11.94□□□□□ -0.5
AP003559.1-201ENST00000540906 TBC1D3FA6NER0 549 aaPredicted RBP11.94□□□□□ -0.5
AP003559.1-201ENST00000540906 MGAT4DA6NG13 374 aa11.94□□□□□ -0.5
AP003559.1-201ENST00000540906 TBC1D3LB9A6J9 549 aa11.94□□□□□ -0.5
AP003559.1-201ENST00000540906 MANBAO00462 879 aa11.94□□□□□ -0.5
AP003559.1-201ENST00000540906 LIN7AO14910 233 aaPredicted RBP11.94□□□□□ -0.5
AP003559.1-201ENST00000540906 LSM1O15116 133 aaKnown RBP11.94□□□□□ -0.5
AP003559.1-201ENST00000540906 SLC31A1O15431 190 aa11.94□□□□□ -0.5
AP003559.1-201ENST00000540906 SLC16A8O95907 504 aa11.94□□□□□ -0.5
AP003559.1-201ENST00000540906 TBC1D3HP0C7X1 549 aa11.94□□□□□ -0.5
AP003559.1-201ENST00000540906 GABRG2P18507 467 aa11.94□□□□□ -0.5
AP003559.1-201ENST00000540906 ADSLP30566 484 aaPredicted RBP11.94□□□□□ -0.5
AP003559.1-201ENST00000540906 ACSL1P33121 698 aa11.94□□□□□ -0.5
AP003559.1-201ENST00000540906 ATP4BP51164 291 aa11.94□□□□□ -0.5
AP003559.1-201ENST00000540906 RAP1GDS1P52306 607 aa11.94□□□□□ -0.5
AP003559.1-201ENST00000540906 AP1S2P56377 157 aa11.94□□□□□ -0.5
AP003559.1-201ENST00000540906 CLDN2P57739 230 aa11.94□□□□□ -0.5
AP003559.1-201ENST00000540906 RPS21P63220 83 aaKnown RBP11.94□□□□□ -0.5
AP003559.1-201ENST00000540906 HMGCS1Q01581 520 aa11.94□□□□□ -0.5
AP003559.1-201ENST00000540906 CDC16Q13042 620 aa11.94□□□□□ -0.5
AP003559.1-201ENST00000540906 NAE1Q13564 534 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms