RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 INIPQ9NRY2 104 aa12.04□□□□□ -0.48
NPC1-202ENST00000540608 ASIC5Q9NY37 505 aa12.04□□□□□ -0.48
NPC1-202ENST00000540608 IL17CQ9P0M4 197 aa12.04□□□□□ -0.48
NPC1-202ENST00000540608 TSR3Q9UJK0 312 aaKnown RBP12.04□□□□□ -0.48
NPC1-202ENST00000540608 OARD1Q9Y530 152 aa12.04□□□□□ -0.48
NPC1-202ENST00000540608 ORC6Q9Y5N6 252 aa12.04□□□□□ -0.48
NPC1-202ENST00000540608 CPQQ9Y646 472 aa12.04□□□□□ -0.48
NPC1-202ENST00000540608 A0A0U1RQS6 177 aa12.04□□□□□ -0.48
NPC1-202ENST00000540608 FAM220BPB1ANY3 271 aa12.04□□□□□ -0.48
NPC1-202ENST00000540608 CBX4O00257 560 aa12.04□□□□□ -0.48
NPC1-202ENST00000540608 GPR39O43194 453 aa12.04□□□□□ -0.48
NPC1-202ENST00000540608 ULK1O75385 1050 aa12.04□□□□□ -0.48
NPC1-202ENST00000540608 WDR47O94967 919 aa12.04□□□□□ -0.48
NPC1-202ENST00000540608 GUCA1CO95843 209 aa12.04□□□□□ -0.48
NPC1-202ENST00000540608 RHOCP08134 193 aa12.04□□□□□ -0.48
NPC1-202ENST00000540608 EMX1Q04741 257 aaPredicted RBP12.04□□□□□ -0.48
NPC1-202ENST00000540608 PRKCZQ05513 592 aa12.04□□□□□ -0.48
NPC1-202ENST00000540608 TRIM16LQ309B1 348 aa12.04□□□□□ -0.48
NPC1-202ENST00000540608 RSPO2Q6UXX9 243 aaPredicted RBP12.04□□□□□ -0.48
NPC1-202ENST00000540608 CERS6Q6ZMG9 384 aa12.04□□□□□ -0.48
NPC1-202ENST00000540608 GCNT7Q6ZNI0 430 aa12.04□□□□□ -0.48
NPC1-202ENST00000540608 PIWIL3Q7Z3Z3 882 aaKnown RBP12.04□□□□□ -0.48
NPC1-202ENST00000540608 PHACTR4Q8IZ21 702 aa12.04□□□□□ -0.48
NPC1-202ENST00000540608 KRTCAP2Q8N6L1 136 aa12.04□□□□□ -0.48
NPC1-202ENST00000540608 FAR1Q8WVX9 515 aa12.04□□□□□ -0.48
NPC1-202ENST00000540608 ALPK1Q96QP1 1244 aa12.04□□□□□ -0.48
NPC1-202ENST00000540608 OR52E6Q96RD3 313 aa12.04□□□□□ -0.48
NPC1-202ENST00000540608 GPR62Q9BZJ7 368 aa12.04□□□□□ -0.48
NPC1-202ENST00000540608 CD244Q9BZW8 370 aa12.04□□□□□ -0.48
NPC1-202ENST00000540608 CCDC90BQ9GZT6 254 aa12.04□□□□□ -0.48
NPC1-202ENST00000540608 AKIP1Q9NQ31 210 aa12.04□□□□□ -0.48
NPC1-202ENST00000540608 TRNAU1APQ9NX07 287 aaKnown RBP12.04□□□□□ -0.48
NPC1-202ENST00000540608 DNMT3LQ9UJW3 386 aa12.04□□□□□ -0.48
NPC1-202ENST00000540608 PKP3Q9Y446 797 aa12.04□□□□□ -0.48
NPC1-202ENST00000540608 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.03□□□□□ -0.48
NPC1-202ENST00000540608 MTMR11A4FU01 709 aa12.03□□□□□ -0.48
NPC1-202ENST00000540608 FFAR3O14843 346 aa12.03□□□□□ -0.48
NPC1-202ENST00000540608 GPR42O15529 346 aa12.03□□□□□ -0.48
NPC1-202ENST00000540608 ADAM23O75077 832 aa12.03□□□□□ -0.48
NPC1-202ENST00000540608 SEC22BO75396 215 aa12.03□□□□□ -0.48
NPC1-202ENST00000540608 RECQL5O94762 991 aaPredicted RBP12.03□□□□□ -0.48
NPC1-202ENST00000540608 VNN2O95498 520 aa12.03□□□□□ -0.48
NPC1-202ENST00000540608 SERPINA1P01009 418 aa12.03□□□□□ -0.48
NPC1-202ENST00000540608 ITGAMP11215 1152 aa12.03□□□□□ -0.48
NPC1-202ENST00000540608 PFKLP17858 780 aa12.03□□□□□ -0.48
NPC1-202ENST00000540608 GZMMP51124 257 aa12.03□□□□□ -0.48
NPC1-202ENST00000540608 CAP1Q01518 475 aa12.03□□□□□ -0.48
NPC1-202ENST00000540608 HMGCS1Q01581 520 aa12.03□□□□□ -0.48
NPC1-202ENST00000540608 ZNF177Q13360 481 aaPredicted RBP12.03□□□□□ -0.48
NPC1-202ENST00000540608 ACOX1Q15067 660 aa12.03□□□□□ -0.48
NPC1-202ENST00000540608 PTRHD1Q6GMV3 140 aaKnown RBP12.03□□□□□ -0.48
NPC1-202ENST00000540608 RGMBQ6NW40 437 aa12.03□□□□□ -0.48
NPC1-202ENST00000540608 NCEH1Q6PIU2 408 aa12.03□□□□□ -0.48
NPC1-202ENST00000540608 TRAF7Q6Q0C0 670 aa12.03□□□□□ -0.48
NPC1-202ENST00000540608 NAT16Q8N8M0 369 aa12.03□□□□□ -0.48
NPC1-202ENST00000540608 NETO1Q8TDF5 533 aa12.03□□□□□ -0.48
NPC1-202ENST00000540608 NCLNQ969V3 563 aa12.03□□□□□ -0.48
NPC1-202ENST00000540608 PYURFQ96I23 114 aa12.03□□□□□ -0.48
NPC1-202ENST00000540608 FAM126AQ9BYI3 521 aaPredicted RBP12.03□□□□□ -0.48
NPC1-202ENST00000540608 CIPCQ9C0C6 399 aa12.03□□□□□ -0.48
NPC1-202ENST00000540608 LRTM1Q9HBL6 345 aa12.03□□□□□ -0.48
NPC1-202ENST00000540608 FARSBQ9NSD9 589 aaKnown RBP12.03□□□□□ -0.48
NPC1-202ENST00000540608 MTRRQ9UBK8 725 aa12.03□□□□□ -0.48
NPC1-202ENST00000540608 ZNF490Q9ULM2 529 aaPredicted RBP12.03□□□□□ -0.48
NPC1-202ENST00000540608 ANGPTL3Q9Y5C1 460 aa12.03□□□□□ -0.48
NPC1-202ENST00000540608 BCKDKO14874 412 aa12.03□□□□□ -0.48
NPC1-202ENST00000540608 ERN1O75460 977 aaKnown RBP12.03□□□□□ -0.48
NPC1-202ENST00000540608 GABARAPO95166 117 aa12.03□□□□□ -0.48
NPC1-202ENST00000540608 ACVR2AP27037 513 aa12.03□□□□□ -0.48
NPC1-202ENST00000540608 ATP5C1P36542 298 aaKnown RBP12.03□□□□□ -0.48
NPC1-202ENST00000540608 PIK3CGP48736 1102 aa12.03□□□□□ -0.48
NPC1-202ENST00000540608 RGS4P49798 205 aa12.03□□□□□ -0.48
NPC1-202ENST00000540608 VAC14Q08AM6 782 aa12.03□□□□□ -0.48
NPC1-202ENST00000540608 DNAJC14Q6Y2X3 702 aaPredicted RBP12.03□□□□□ -0.48
NPC1-202ENST00000540608 RNF19BQ6ZMZ0 732 aa12.03□□□□□ -0.48
NPC1-202ENST00000540608 BTLAQ7Z6A9 289 aa12.03□□□□□ -0.48
NPC1-202ENST00000540608 SAPCD2Q86UD0 394 aa12.03□□□□□ -0.48
NPC1-202ENST00000540608 CHPFQ8IZ52 775 aa12.03□□□□□ -0.48
NPC1-202ENST00000540608 S100ZQ8WXG8 99 aa12.03□□□□□ -0.48
NPC1-202ENST00000540608 FAM193BQ96PV7 902 aaPredicted RBP12.03□□□□□ -0.48
NPC1-202ENST00000540608 ZFP14Q9HCL3 533 aa12.03□□□□□ -0.48
NPC1-202ENST00000540608 OPTCQ9UBM4 332 aa12.03□□□□□ -0.48
NPC1-202ENST00000540608 PCDHB14Q9Y5E9 798 aa12.03□□□□□ -0.48
NPC1-202ENST00000540608 ELNP15502 786 aa12.02□□□□□ -0.48
NPC1-202ENST00000540608 ZNF7P17097 686 aaPredicted RBP12.02□□□□□ -0.48
NPC1-202ENST00000540608 RPS3P23396 243 aaKnown RBP eCLIP12.02□□□□□ -0.489e-7■■■□□ 19.1
NPC1-202ENST00000540608 GDF5P43026 501 aa12.02□□□□□ -0.48
NPC1-202ENST00000540608 FCGRTP55899 365 aa12.02□□□□□ -0.48
NPC1-202ENST00000540608 GPR17Q13304 367 aa12.02□□□□□ -0.48
NPC1-202ENST00000540608 GTDC1Q4AE62 458 aa12.02□□□□□ -0.48
NPC1-202ENST00000540608 USP39Q53GS9 565 aaKnown RBP12.02□□□□□ -0.48
NPC1-202ENST00000540608 SHQ1Q6PI26 577 aaKnown RBP12.02□□□□□ -0.48
NPC1-202ENST00000540608 SUSD1Q6UWL2 747 aa12.02□□□□□ -0.48
NPC1-202ENST00000540608 LRRC8DQ7L1W4 858 aa12.02□□□□□ -0.48
NPC1-202ENST00000540608 DET1Q7L5Y6 550 aa12.02□□□□□ -0.48
NPC1-202ENST00000540608 SLCO6A1Q86UG4 719 aa12.02□□□□□ -0.48
NPC1-202ENST00000540608 DENND1CQ8IV53 801 aa12.02□□□□□ -0.48
NPC1-202ENST00000540608 RGL4Q8IZJ4 473 aa12.02□□□□□ -0.48
NPC1-202ENST00000540608 ABI1Q8IZP0 508 aa12.02□□□□□ -0.48
NPC1-202ENST00000540608 TAMM41Q96BW9 452 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms