RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 GALNT16Q8N428 558 aa11.6□□□□□ -0.55
CBX3P4-202ENST00000540428 CLEC1AQ8NC01 280 aa11.6□□□□□ -0.55
CBX3P4-202ENST00000540428 OR2Y1Q8NGV0 311 aa11.6□□□□□ -0.55
CBX3P4-202ENST00000540428 STYXQ8WUJ0 223 aa11.6□□□□□ -0.55
CBX3P4-202ENST00000540428 TM9SF4Q92544 642 aa11.6□□□□□ -0.55
CBX3P4-202ENST00000540428 NACC2Q96BF6 587 aa11.6□□□□□ -0.55
CBX3P4-202ENST00000540428 SNRNP40Q96DI7 357 aaKnown RBP11.6□□□□□ -0.55
CBX3P4-202ENST00000540428 CDKN2AIPNLQ96HQ2 116 aa11.6□□□□□ -0.55
CBX3P4-202ENST00000540428 GBP5Q96PP8 586 aa11.6□□□□□ -0.55
CBX3P4-202ENST00000540428 NRTNQ99748 197 aa11.6□□□□□ -0.55
CBX3P4-202ENST00000540428 AP1M1Q9BXS5 423 aa11.6□□□□□ -0.55
CBX3P4-202ENST00000540428 XKR8Q9H6D3 395 aa11.6□□□□□ -0.55
CBX3P4-202ENST00000540428 FAM60AQ9NP50 221 aa11.6□□□□□ -0.55
CBX3P4-202ENST00000540428 OR6C2Q9NZP2 312 aa11.6□□□□□ -0.55
CBX3P4-202ENST00000540428 NDOR1Q9UHB4 597 aa11.6□□□□□ -0.55
CBX3P4-202ENST00000540428 POLG2Q9UHN1 485 aa11.6□□□□□ -0.55
CBX3P4-202ENST00000540428 GPN3Q9UHW5 284 aaPredicted RBP11.6□□□□□ -0.55
CBX3P4-202ENST00000540428 ICKQ9UPZ9 632 aa11.6□□□□□ -0.55
CBX3P4-202ENST00000540428 NBPF19A0A087WUL8 3843 aa11.6□□□□□ -0.55
CBX3P4-202ENST00000540428 NOTCH2Q04721 2471 aa11.6□□□□□ -0.55
CBX3P4-202ENST00000540428 A0A0J9YY10 115 aa11.59□□□□□ -0.55
CBX3P4-202ENST00000540428 CCL22O00626 93 aa11.59□□□□□ -0.55
CBX3P4-202ENST00000540428 ZSCAN9O15535 394 aaPredicted RBP11.59□□□□□ -0.55
CBX3P4-202ENST00000540428 KDM1AO60341 852 aa11.59□□□□□ -0.55
CBX3P4-202ENST00000540428 TJP3O95049 919 aa11.59□□□□□ -0.55
CBX3P4-202ENST00000540428 CHRM5P08912 532 aaPredicted RBP11.59□□□□□ -0.55
CBX3P4-202ENST00000540428 CBSLP0DN79 551 aa11.59□□□□□ -0.55
CBX3P4-202ENST00000540428 UGT2B7P16662 529 aa11.59□□□□□ -0.55
CBX3P4-202ENST00000540428 PSMA3P25788 255 aa11.59□□□□□ -0.55
CBX3P4-202ENST00000540428 ACADLP28330 430 aa11.59□□□□□ -0.55
CBX3P4-202ENST00000540428 CBSP35520 551 aa11.59□□□□□ -0.55
CBX3P4-202ENST00000540428 CYLC1P35663 651 aaPredicted RBP11.59□□□□□ -0.55
CBX3P4-202ENST00000540428 RWDD2BP57060 319 aa11.59□□□□□ -0.55
CBX3P4-202ENST00000540428 DBN1Q16643 649 aa11.59□□□□□ -0.55
CBX3P4-202ENST00000540428 KYNUQ16719 465 aa11.59□□□□□ -0.55
CBX3P4-202ENST00000540428 PARP6Q2NL67 630 aa11.59□□□□□ -0.55
CBX3P4-202ENST00000540428 MLIPQ5VWP3 458 aa11.59□□□□□ -0.55
CBX3P4-202ENST00000540428 MRPL14Q6P1L8 145 aaKnown RBP11.59□□□□□ -0.55
CBX3P4-202ENST00000540428 UNC5AQ6ZN44 842 aa11.59□□□□□ -0.55
CBX3P4-202ENST00000540428 TAS2R42Q7RTR8 314 aa11.59□□□□□ -0.55
CBX3P4-202ENST00000540428 CLDN19Q8N6F1 224 aa11.59□□□□□ -0.55
CBX3P4-202ENST00000540428 TC2NQ8N9U0 490 aa11.59□□□□□ -0.55
CBX3P4-202ENST00000540428 OR5K2Q8NHB8 316 aa11.59□□□□□ -0.55
CBX3P4-202ENST00000540428 FLVCR1-AS1Q8TAF5 88 aa11.59□□□□□ -0.55
CBX3P4-202ENST00000540428 PRR7Q8TB68 274 aa11.59□□□□□ -0.55
CBX3P4-202ENST00000540428 PTERQ96BW5 349 aa11.59□□□□□ -0.55
CBX3P4-202ENST00000540428 OR2A14Q96R47 310 aa11.59□□□□□ -0.55
CBX3P4-202ENST00000540428 ZNF552Q9H707 407 aaPredicted RBP11.59□□□□□ -0.55
CBX3P4-202ENST00000540428 LRRC40Q9H9A6 602 aa11.59□□□□□ -0.55
CBX3P4-202ENST00000540428 MAP10Q9P2G4 905 aa11.59□□□□□ -0.55
CBX3P4-202ENST00000540428 IFT80Q9P2H3 777 aaPredicted RBP11.59□□□□□ -0.55
CBX3P4-202ENST00000540428 ASF1AQ9Y294 204 aa11.59□□□□□ -0.55
CBX3P4-202ENST00000540428 PTRH2Q9Y3E5 179 aaKnown RBP11.59□□□□□ -0.55
CBX3P4-202ENST00000540428 UNC79Q9P2D8 2635 aa11.58□□□□□ -0.55
CBX3P4-202ENST00000540428 CBX6O95503 412 aa11.58□□□□□ -0.56
CBX3P4-202ENST00000540428 AP2A1O95782 977 aa11.58□□□□□ -0.56
CBX3P4-202ENST00000540428 LDLRP01130 860 aa11.58□□□□□ -0.56
CBX3P4-202ENST00000540428 FTH1P02794 183 aa11.58□□□□□ -0.56
CBX3P4-202ENST00000540428 RAPSNQ13702 412 aa11.58□□□□□ -0.56
CBX3P4-202ENST00000540428 SPARCL1Q14515 664 aa11.58□□□□□ -0.56
CBX3P4-202ENST00000540428 NR6A1Q15406 480 aa11.58□□□□□ -0.56
CBX3P4-202ENST00000540428 ZIC1Q15915 447 aa11.58□□□□□ -0.56
CBX3P4-202ENST00000540428 SLC5A12Q1EHB4 618 aa11.58□□□□□ -0.56
CBX3P4-202ENST00000540428 SKOR2Q2VWA4 1001 aaPredicted RBP11.58□□□□□ -0.56
CBX3P4-202ENST00000540428 PACS1Q6VY07 963 aa11.58□□□□□ -0.56
CBX3P4-202ENST00000540428 Q6ZS92 163 aa11.58□□□□□ -0.56
CBX3P4-202ENST00000540428 MAMDC2Q7Z304 686 aaPredicted RBP11.58□□□□□ -0.56
CBX3P4-202ENST00000540428 PIANPQ8IYJ0 282 aa11.58□□□□□ -0.56
CBX3P4-202ENST00000540428 OR5AR1Q8NGP9 310 aa11.58□□□□□ -0.56
CBX3P4-202ENST00000540428 C19orf60Q96EN9 201 aa11.58□□□□□ -0.56
CBX3P4-202ENST00000540428 BARD1Q99728 777 aaKnown RBP11.58□□□□□ -0.56
CBX3P4-202ENST00000540428 SPRTNQ9H040 489 aaPredicted RBP11.58□□□□□ -0.56
CBX3P4-202ENST00000540428 ILKAPQ9H0C8 392 aaPredicted RBP11.58□□□□□ -0.56
CBX3P4-202ENST00000540428 TXLNGQ9NUQ3 528 aa11.58□□□□□ -0.56
CBX3P4-202ENST00000540428 ASF1BQ9NVP2 202 aa11.58□□□□□ -0.56
CBX3P4-202ENST00000540428 P4HTMQ9NXG6 502 aa11.58□□□□□ -0.56
CBX3P4-202ENST00000540428 SMARCAL1Q9NZC9 954 aa11.58□□□□□ -0.56
CBX3P4-202ENST00000540428 ERRFI1Q9UJM3 462 aaPredicted RBP11.58□□□□□ -0.56
CBX3P4-202ENST00000540428 TFR2Q9UP52 801 aa11.58□□□□□ -0.56
CBX3P4-202ENST00000540428 SEC16AO15027 2179 aa11.58□□□□□ -0.56
CBX3P4-202ENST00000540428 SPTBP11277 2137 aa11.57□□□□□ -0.56
CBX3P4-202ENST00000540428 SLC5A10A0PJK1 596 aa11.57□□□□□ -0.56
CBX3P4-202ENST00000540428 A1L4Q6 167 aa11.57□□□□□ -0.56
CBX3P4-202ENST00000540428 MROH6A6NGR9 719 aa11.57□□□□□ -0.56
CBX3P4-202ENST00000540428 F8W8V4 182 aa11.57□□□□□ -0.56
CBX3P4-202ENST00000540428 PSMD3O43242 534 aa11.57□□□□□ -0.56
CBX3P4-202ENST00000540428 HCRTR1O43613 425 aa11.57□□□□□ -0.56
CBX3P4-202ENST00000540428 KRT86O43790 486 aa11.57□□□□□ -0.56
CBX3P4-202ENST00000540428 PRSS56P0CW18 603 aa11.57□□□□□ -0.56
CBX3P4-202ENST00000540428 TPBGLP0DKB5 382 aa11.57□□□□□ -0.56
CBX3P4-202ENST00000540428 KIR2DS3Q14952 304 aa11.57□□□□□ -0.56
CBX3P4-202ENST00000540428 CYP2A13Q16696 494 aa11.57□□□□□ -0.56
CBX3P4-202ENST00000540428 DEFB110Q30KQ9 67 aa11.57□□□□□ -0.56
CBX3P4-202ENST00000540428 P3H1Q32P28 736 aa11.57□□□□□ -0.56
CBX3P4-202ENST00000540428 NKAIN1Q4KMZ8 207 aa11.57□□□□□ -0.56
CBX3P4-202ENST00000540428 CRB2Q5IJ48 1285 aa11.57□□□□□ -0.56
CBX3P4-202ENST00000540428 C1orf189Q5VU69 101 aa11.57□□□□□ -0.56
CBX3P4-202ENST00000540428 ARHGEF18Q6ZSZ5 1173 aa11.57□□□□□ -0.56
CBX3P4-202ENST00000540428 TRIM73Q86UV7 250 aa11.57□□□□□ -0.56
CBX3P4-202ENST00000540428 ZADH2Q8N4Q0 377 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms