RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 DUS3LQ96G46 650 aaKnown RBP12.78□□□□□ -0.36
DNMT1-203ENST00000540357 NSUN5Q96P11 429 aaKnown RBP12.78□□□□□ -0.36
DNMT1-203ENST00000540357 DSN1Q9H410 356 aa12.78□□□□□ -0.36
DNMT1-203ENST00000540357 FADS2P1A8MWK0 482 aa12.78□□□□□ -0.36
DNMT1-203ENST00000540357 C9P02748 559 aa12.78□□□□□ -0.36
DNMT1-203ENST00000540357 MAP2K4P45985 399 aa12.78□□□□□ -0.36
DNMT1-203ENST00000540357 CAMK2GQ13555 558 aaPredicted RBP12.78□□□□□ -0.36
DNMT1-203ENST00000540357 HSF5Q4G112 596 aaPredicted RBP12.78□□□□□ -0.36
DNMT1-203ENST00000540357 USP39Q53GS9 565 aaKnown RBP12.78□□□□□ -0.36
DNMT1-203ENST00000540357 LYSMD3Q7Z3D4 306 aa12.78□□□□□ -0.36
DNMT1-203ENST00000540357 RASAL3Q86YV0 1011 aa12.78□□□□□ -0.36
DNMT1-203ENST00000540357 TP53INP2Q8IXH6 220 aa12.78□□□□□ -0.36
DNMT1-203ENST00000540357 LRCH3Q96II8 777 aa12.78□□□□□ -0.36
DNMT1-203ENST00000540357 NLNQ9BYT8 704 aa12.78□□□□□ -0.36
DNMT1-203ENST00000540357 SMOC2Q9H3U7 446 aa12.78□□□□□ -0.36
DNMT1-203ENST00000540357 CD300AQ9UGN4 299 aa12.78□□□□□ -0.36
DNMT1-203ENST00000540357 FKBPLQ9UIM3 349 aa12.78□□□□□ -0.36
DNMT1-203ENST00000540357 CDH7Q9ULB5 785 aa12.78□□□□□ -0.36
DNMT1-203ENST00000540357 PTGDR2Q9Y5Y4 395 aa12.78□□□□□ -0.36
DNMT1-203ENST00000540357 FAM240BA0A1B0GVZ2 78 aa12.77□□□□□ -0.36
DNMT1-203ENST00000540357 MOXD2PA6NHM9 499 aa12.77□□□□□ -0.36
DNMT1-203ENST00000540357 JUNP05412 331 aaKnown RBP12.77□□□□□ -0.36
DNMT1-203ENST00000540357 CDKN2DP55273 166 aa12.77□□□□□ -0.36
DNMT1-203ENST00000540357 GRSF1Q12849 480 aaKnown RBP eCLIP12.77□□□□□ -0.36
DNMT1-203ENST00000540357 GALNT12Q8IXK2 581 aa12.77□□□□□ -0.36
DNMT1-203ENST00000540357 ASCC1Q8N9N2 400 aaKnown RBP12.77□□□□□ -0.36
DNMT1-203ENST00000540357 ACDQ96AP0 544 aa12.77□□□□□ -0.36
DNMT1-203ENST00000540357 SLC30A2Q9BRI3 323 aa12.77□□□□□ -0.36
DNMT1-203ENST00000540357 RNF38Q9H0F5 515 aa12.77□□□□□ -0.36
DNMT1-203ENST00000540357 ANKMY1Q9P2S6 941 aa12.77□□□□□ -0.36
DNMT1-203ENST00000540357 PLOD2O00469 737 aa12.77□□□□□ -0.37
DNMT1-203ENST00000540357 OR10H3O60404 316 aa12.77□□□□□ -0.37
DNMT1-203ENST00000540357 CLDN11O75508 207 aa12.77□□□□□ -0.37
DNMT1-203ENST00000540357 CYP7B1O75881 506 aa12.77□□□□□ -0.37
DNMT1-203ENST00000540357 GSTT2P0CG29 244 aa12.77□□□□□ -0.37
DNMT1-203ENST00000540357 GSTT2BP0CG30 244 aa12.77□□□□□ -0.37
DNMT1-203ENST00000540357 SERPINA4P29622 427 aa12.77□□□□□ -0.37
DNMT1-203ENST00000540357 CCT3P49368 545 aaKnown RBP12.77□□□□□ -0.37
DNMT1-203ENST00000540357 ALDH7A1P49419 539 aaKnown RBP12.77□□□□□ -0.37
DNMT1-203ENST00000540357 PPP1R8Q12972 351 aaKnown RBP12.77□□□□□ -0.37
DNMT1-203ENST00000540357 DHRS4L2Q6PKH6 230 aa12.77□□□□□ -0.37
DNMT1-203ENST00000540357 UBE2R2Q712K3 238 aaPredicted RBP12.77□□□□□ -0.37
DNMT1-203ENST00000540357 C16orf59Q7L2K0 433 aa12.77□□□□□ -0.37
DNMT1-203ENST00000540357 GOLGA7Q7Z5G4 137 aa12.77□□□□□ -0.37
DNMT1-203ENST00000540357 PELI3Q8N2H9 469 aa12.77□□□□□ -0.37
DNMT1-203ENST00000540357 OR4F6Q8NGB9 312 aa12.77□□□□□ -0.37
DNMT1-203ENST00000540357 PCDHGA10Q9Y5H3 936 aa12.77□□□□□ -0.37
DNMT1-203ENST00000540357 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.77□□□□□ -0.37
DNMT1-203ENST00000540357 MATN1P21941 496 aa12.77□□□□□ -0.37
DNMT1-203ENST00000540357 EDNRBP24530 442 aa12.77□□□□□ -0.37
DNMT1-203ENST00000540357 SYVN1Q86TM6 617 aa12.77□□□□□ -0.37
DNMT1-203ENST00000540357 PEX5LQ8IYB4 626 aa12.77□□□□□ -0.37
DNMT1-203ENST00000540357 GPC2Q8N158 579 aa12.77□□□□□ -0.37
DNMT1-203ENST00000540357 IMP4Q96G21 291 aaKnown RBP12.77□□□□□ -0.37
DNMT1-203ENST00000540357 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.77□□□□□ -0.373e-6■■□□□ 14.4
DNMT1-203ENST00000540357 DNAJC11Q9NVH1 559 aa12.77□□□□□ -0.37
DNMT1-203ENST00000540357 CCDC59Q9P031 241 aaKnown RBP12.77□□□□□ -0.37
DNMT1-203ENST00000540357 PCDHB7Q9Y5E2 793 aa12.77□□□□□ -0.37
DNMT1-203ENST00000540357 SCAMP3O14828 347 aaKnown RBP12.77□□□□□ -0.37
DNMT1-203ENST00000540357 ALDH1A1P00352 501 aa12.77□□□□□ -0.37
DNMT1-203ENST00000540357 SERPIND1P05546 499 aa12.77□□□□□ -0.37
DNMT1-203ENST00000540357 TACR2P21452 398 aa12.77□□□□□ -0.37
DNMT1-203ENST00000540357 RPL10P27635 214 aaKnown RBP12.77□□□□□ -0.37
DNMT1-203ENST00000540357 ACLYP53396 1101 aa12.77□□□□□ -0.37
DNMT1-203ENST00000540357 TUSC3Q13454 348 aa12.77□□□□□ -0.37
DNMT1-203ENST00000540357 ANKDD1AQ495B1 522 aa12.77□□□□□ -0.37
DNMT1-203ENST00000540357 USP45Q70EL2 814 aa12.77□□□□□ -0.37
DNMT1-203ENST00000540357 C1QTNF1Q9BXJ1 281 aa12.77□□□□□ -0.37
DNMT1-203ENST00000540357 ABCG8Q9H221 673 aa12.77□□□□□ -0.37
DNMT1-203ENST00000540357 MIOSQ9NXC5 875 aa12.77□□□□□ -0.37
DNMT1-203ENST00000540357 TOR4AQ9NXH8 423 aa12.77□□□□□ -0.37
DNMT1-203ENST00000540357 PHF11Q9UIL8 331 aa12.77□□□□□ -0.37
DNMT1-203ENST00000540357 POFUT2Q9Y2G5 429 aa12.77□□□□□ -0.37
DNMT1-203ENST00000540357 GRIP1Q9Y3R0 1128 aa12.77□□□□□ -0.37
DNMT1-203ENST00000540357 HS3ST4Q9Y661 456 aa12.77□□□□□ -0.37
DNMT1-203ENST00000540357 PMF1-BGLAPU3KQ54 211 aa12.77□□□□□ -0.37
DNMT1-203ENST00000540357 ENPP3O14638 875 aa12.76□□□□□ -0.37
DNMT1-203ENST00000540357 PRRG1O14668 218 aa12.76□□□□□ -0.37
DNMT1-203ENST00000540357 MAFKO60675 156 aa12.76□□□□□ -0.37
DNMT1-203ENST00000540357 NOS1APO75052 506 aaPredicted RBP12.76□□□□□ -0.37
DNMT1-203ENST00000540357 AP2A2O94973 939 aa12.76□□□□□ -0.37
DNMT1-203ENST00000540357 CCNB2O95067 398 aa12.76□□□□□ -0.37
DNMT1-203ENST00000540357 CATP04040 527 aaKnown RBP12.76□□□□□ -0.37
DNMT1-203ENST00000540357 AZGP1P25311 298 aaKnown RBP12.76□□□□□ -0.37
DNMT1-203ENST00000540357 AQP1P29972 269 aa12.76□□□□□ -0.37
DNMT1-203ENST00000540357 MCCD1P59942 119 aaPredicted RBP12.76□□□□□ -0.37
DNMT1-203ENST00000540357 STARD3Q14849 445 aa12.76□□□□□ -0.37
DNMT1-203ENST00000540357 IFI44LQ53G44 452 aa12.76□□□□□ -0.37
DNMT1-203ENST00000540357 GCNT6Q5T4J0 391 aa12.76□□□□□ -0.37
DNMT1-203ENST00000540357 DDI2Q5TDH0 399 aa12.76□□□□□ -0.37
DNMT1-203ENST00000540357 FAM171A1Q5VUB5 890 aa12.76□□□□□ -0.37
DNMT1-203ENST00000540357 CACTIN-AS1Q8N1I8 211 aa12.76□□□□□ -0.37
DNMT1-203ENST00000540357 PGAP3Q96FM1 320 aaPredicted RBP12.76□□□□□ -0.37
DNMT1-203ENST00000540357 YME1L1Q96TA2 773 aa12.76□□□□□ -0.37
DNMT1-203ENST00000540357 SLC29A3Q9BZD2 475 aa12.76□□□□□ -0.37
DNMT1-203ENST00000540357 TESMINQ9Y4I5 508 aa12.76□□□□□ -0.37
DNMT1-203ENST00000540357 PCDHB9Q9Y5E1 797 aa12.76□□□□□ -0.37
DNMT1-203ENST00000540357 LYVE1Q9Y5Y7 322 aa12.76□□□□□ -0.37
DNMT1-203ENST00000540357 FAM155AB1AL88 458 aaPredicted RBP12.76□□□□□ -0.37
DNMT1-203ENST00000540357 NUAK1O60285 661 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms