RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 THRAP10827 490 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 ENO3P13929 434 aaPredicted RBP6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 ZNF37AP17032 561 aaPredicted RBP6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 TYRP1P17643 537 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 SPINK2P20155 84 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 MCM3P25205 808 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 CCKBRP32239 447 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 CBSP35520 551 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 SKIV2L2P42285 1042 aaKnown RBP6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 MAPK9P45984 424 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 BDKRB1P46663 353 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 PGGT1BP53609 377 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 PMS2P54278 862 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 GFERP55789 205 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 VSNL1P62760 191 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 ZFP36L1Q07352 338 aaKnown RBP6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 ABRQ12979 859 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 TARDBPQ13148 414 aaKnown RBP eCLIP6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 GRB7Q14451 532 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 KRT33BQ14525 404 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 ZNF460Q14592 562 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 KLHL38Q2WGJ6 581 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 LRRC8EQ6NSJ5 796 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 UGT3A1Q6NUS8 523 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 WDR74Q6RFH5 385 aaPredicted RBP6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 PAQR3Q6TCH7 311 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 ZNF574Q6ZN55 896 aaPredicted RBP6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 TRMT10CQ7L0Y3 403 aaKnown RBP6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 PIWIL4Q7Z3Z4 852 aaKnown RBP6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 MARCH9Q86YJ5 346 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 RASGRP3Q8IV61 690 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 CEP97Q8IW35 865 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 DCUN1D3Q8IWE4 304 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 CTAGE3PQ8IX95 158 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 CPNE9Q8IYJ1 553 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 PPM1NQ8N819 430 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 PHC3Q8NDX5 983 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 OR4D9Q8NGE8 314 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 INPP5DQ92835 1189 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 LIN37Q96GY3 246 aaPredicted RBP6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 AHCYL2Q96HN2 611 aaKnown RBP6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 ELMO2Q96JJ3 720 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 CYTH2Q99418 400 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 GPR22Q99680 433 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 NRTNQ99748 197 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 DPYSL5Q9BPU6 564 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 MENTQ9BUN1 341 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 TWSG1Q9GZX9 223 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 RAB33BQ9H082 229 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 ZMYND15Q9H091 742 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 EPB41L4BQ9H329 900 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 TFB2MQ9H5Q4 396 aaKnown RBP6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 POPDC3Q9HBV1 291 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 TXNDC16Q9P2K2 825 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 POLG2Q9UHN1 485 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 TSR3Q9UJK0 312 aaKnown RBP6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 ANGPTL2Q9UKU9 493 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 ICKQ9UPZ9 632 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 MTO1Q9Y2Z2 717 aaKnown RBP6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 V9GYY5 206 aaPredicted RBP6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 ZFHX4Q86UP3 3567 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 ANKRD12Q6UB98 2062 aa6.78□□□□□ -1.32
LPCAT3-209ENST00000540060 IGF2RP11717 2491 aa6.77□□□□□ -1.32
LPCAT3-209ENST00000540060 A0A087WUV0 522 aaPredicted RBP6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 A0A1W2PNU3 283 aaPredicted RBP6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 KRT87PA6NCN2 255 aa6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 ARHGEF33A8MVX0 844 aa6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 BTN3A1O00481 513 aa6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 C1orf105O95561 183 aa6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 ITGA2BP08514 1039 aa6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 ANKRD34CP0C6C1 535 aa6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 JUPP14923 745 aa6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 PKLRP30613 574 aa6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 SHMT2P34897 504 aa6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 SPRP35270 261 aaPredicted RBP6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 CCNFP41002 786 aa6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 RGS4P49798 205 aa6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 INHBCP55103 352 aa6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 TAS2R39P59534 338 aa6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 PPP1CAP62136 330 aa6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 POU4F1Q01851 419 aa6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 PRKG2Q13237 762 aa6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 ZKSCAN8Q15776 578 aaPredicted RBP6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 ERCC6LQ2NKX8 1250 aa6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 CCSMST1Q4G0I0 132 aa6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 GRTP1Q5TC63 336 aa6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 WDR93Q6P2C0 686 aa6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 TMEM71Q6P5X7 295 aa6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 KLHL35Q6PF15 583 aa6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 TMEM207Q6UWW9 146 aa6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 CYHR1Q6ZMK1 362 aa6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 CCNI2Q6ZMN8 369 aaPredicted RBP6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 USP53Q70EK8 1073 aa6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 AMIGO1Q86WK6 493 aa6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 OOSP2Q86WS3 158 aa6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 PLXDC1Q8IUK5 500 aa6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 ADGRF3Q8IZF5 1079 aa6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 LINC01555Q8NAE3 123 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms