RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 PCTPQ9UKL6 214 aa15.75■□□□□ 0.11
TRAF3-204ENST00000539721 CFAP20Q9Y6A4 193 aaKnown RBP15.75■□□□□ 0.11
TRAF3-204ENST00000539721 NDUFAB1O14561 156 aa15.74■□□□□ 0.11
TRAF3-204ENST00000539721 GPR37L1O60883 481 aa15.74■□□□□ 0.11
TRAF3-204ENST00000539721 CTSEP14091 401 aa15.74■□□□□ 0.11
TRAF3-204ENST00000539721 CDH13P55290 713 aa15.74■□□□□ 0.11
TRAF3-204ENST00000539721 UAP1L1Q3KQV9 507 aa15.74■□□□□ 0.11
TRAF3-204ENST00000539721 CGB2Q6NT52 195 aa15.74■□□□□ 0.11
TRAF3-204ENST00000539721 SPATS2Q86XZ4 545 aaKnown RBP15.74■□□□□ 0.11
TRAF3-204ENST00000539721 LSMEM2Q8N112 164 aa15.74■□□□□ 0.11
TRAF3-204ENST00000539721 OR5AR1Q8NGP9 310 aa15.74■□□□□ 0.11
TRAF3-204ENST00000539721 ZNF483Q8TF39 744 aaPredicted RBP15.74■□□□□ 0.11
TRAF3-204ENST00000539721 ZNF473Q8WTR7 871 aaKnown RBP15.74■□□□□ 0.11
TRAF3-204ENST00000539721 SKA1Q96BD8 255 aa15.74■□□□□ 0.11
TRAF3-204ENST00000539721 FBXL8Q96CD0 374 aa15.74■□□□□ 0.11
TRAF3-204ENST00000539721 GRAMD1AQ96CP6 724 aa15.74■□□□□ 0.11
TRAF3-204ENST00000539721 NSUN5Q96P11 429 aaKnown RBP15.74■□□□□ 0.11
TRAF3-204ENST00000539721 PKP4Q99569 1192 aa15.74■□□□□ 0.11
TRAF3-204ENST00000539721 ELAC2Q9BQ52 826 aaKnown RBP15.74■□□□□ 0.11
TRAF3-204ENST00000539721 TRMOQ9BU70 441 aa15.74■□□□□ 0.11
TRAF3-204ENST00000539721 GSDMCQ9BYG8 508 aa15.74■□□□□ 0.11
TRAF3-204ENST00000539721 SHCBP1LQ9BZQ2 653 aa15.74■□□□□ 0.11
TRAF3-204ENST00000539721 CD244Q9BZW8 370 aa15.74■□□□□ 0.11
TRAF3-204ENST00000539721 EML4Q9HC35 981 aaKnown RBP15.74■□□□□ 0.11
TRAF3-204ENST00000539721 ASB1Q9Y576 335 aa15.74■□□□□ 0.11
TRAF3-204ENST00000539721 HRO43593 1189 aa15.73■□□□□ 0.11
TRAF3-204ENST00000539721 CCNT2O60583 730 aaKnown RBP15.73■□□□□ 0.11
TRAF3-204ENST00000539721 SNUPNO95149 360 aaKnown RBP15.73■□□□□ 0.11
TRAF3-204ENST00000539721 TROVE2P10155 538 aaKnown RBP eCLIP15.73■□□□□ 0.11
TRAF3-204ENST00000539721 KITP10721 976 aa15.73■□□□□ 0.11
TRAF3-204ENST00000539721 JUNDP17535 347 aa15.73■□□□□ 0.11
TRAF3-204ENST00000539721 TSPAN8P19075 237 aa15.73■□□□□ 0.11
TRAF3-204ENST00000539721 HALP42357 657 aa15.73■□□□□ 0.11
TRAF3-204ENST00000539721 CSNK1EP49674 416 aaKnown RBP15.73■□□□□ 0.11
TRAF3-204ENST00000539721 AFF3P51826 1226 aaKnown RBP15.73■□□□□ 0.11
TRAF3-204ENST00000539721 C21orf59P57076 290 aa15.73■□□□□ 0.11
TRAF3-204ENST00000539721 NXPH1P58417 271 aa15.73■□□□□ 0.11
TRAF3-204ENST00000539721 CLCQ05315 142 aa15.73■□□□□ 0.11
TRAF3-204ENST00000539721 SF3A3Q12874 501 aaKnown RBP eCLIP15.73■□□□□ 0.11
TRAF3-204ENST00000539721 CLCA4Q14CN2 919 aa15.73■□□□□ 0.11
TRAF3-204ENST00000539721 PLK5Q496M5 336 aa15.73■□□□□ 0.11
TRAF3-204ENST00000539721 DUS1LQ6P1R4 473 aaKnown RBP15.73■□□□□ 0.11
TRAF3-204ENST00000539721 CEP68Q76N32 757 aa15.73■□□□□ 0.11
TRAF3-204ENST00000539721 NRROSQ86YC3 692 aa15.73■□□□□ 0.11
TRAF3-204ENST00000539721 DCUN1D3Q8IWE4 304 aa15.73■□□□□ 0.11
TRAF3-204ENST00000539721 OR5K2Q8NHB8 316 aa15.73■□□□□ 0.11
TRAF3-204ENST00000539721 ATL1Q8WXF7 558 aa15.73■□□□□ 0.11
TRAF3-204ENST00000539721 THOC1Q96FV9 657 aaKnown RBP15.73■□□□□ 0.11
TRAF3-204ENST00000539721 ILKAPQ9H0C8 392 aaPredicted RBP15.73■□□□□ 0.11
TRAF3-204ENST00000539721 TRIT1Q9H3H1 467 aaKnown RBP15.73■□□□□ 0.11
TRAF3-204ENST00000539721 CAAP1Q9H8G2 361 aa15.73■□□□□ 0.11
TRAF3-204ENST00000539721 SEMA4BQ9NPR2 832 aaPredicted RBP15.73■□□□□ 0.11
TRAF3-204ENST00000539721 IMP3Q9NV31 184 aaKnown RBP15.73■□□□□ 0.11
TRAF3-204ENST00000539721 OPTCQ9UBM4 332 aa15.73■□□□□ 0.11
TRAF3-204ENST00000539721 MARCOQ9UEW3 520 aaPredicted RBP15.73■□□□□ 0.11
TRAF3-204ENST00000539721 TBC1D29Q9UFV1 150 aa15.73■□□□□ 0.11
TRAF3-204ENST00000539721 APOBEC3BQ9UH17 382 aaKnown RBP15.73■□□□□ 0.11
TRAF3-204ENST00000539721 RAP2CQ9Y3L5 183 aa15.73■□□□□ 0.11
TRAF3-204ENST00000539721 GON4LQ3T8J9 2241 aa15.73■□□□□ 0.11
TRAF3-204ENST00000539721 TDRD6O60522 2096 aaKnown RBP15.73■□□□□ 0.11
TRAF3-204ENST00000539721 MYO1CO00159 1063 aa15.72■□□□□ 0.11
TRAF3-204ENST00000539721 E2F3O00716 465 aa15.72■□□□□ 0.11
TRAF3-204ENST00000539721 VILLO15195 856 aa15.72■□□□□ 0.11
TRAF3-204ENST00000539721 STK16O75716 305 aa15.72■□□□□ 0.11
TRAF3-204ENST00000539721 MPSTP25325 297 aa15.72■□□□□ 0.11
TRAF3-204ENST00000539721 GGT5P36269 586 aa15.72■□□□□ 0.11
TRAF3-204ENST00000539721 PRKAA1Q13131 559 aa15.72■□□□□ 0.11
TRAF3-204ENST00000539721 TEAD4Q15561 434 aa15.72■□□□□ 0.11
TRAF3-204ENST00000539721 RBBP7Q16576 425 aa15.72■□□□□ 0.11
TRAF3-204ENST00000539721 ZNF528Q3MIS6 628 aa15.72■□□□□ 0.11
TRAF3-204ENST00000539721 TBC1D21Q8IYX1 336 aa15.72■□□□□ 0.11
TRAF3-204ENST00000539721 ZNF781Q8N8C0 355 aa15.72■□□□□ 0.11
TRAF3-204ENST00000539721 OR9A1PQ8NGU1 263 aa15.72■□□□□ 0.11
TRAF3-204ENST00000539721 GPBAR1Q8TDU6 330 aa15.72■□□□□ 0.11
TRAF3-204ENST00000539721 TRPC4APQ8TEL6 797 aa15.72■□□□□ 0.11
TRAF3-204ENST00000539721 RAD51AP1Q96B01 352 aa15.72■□□□□ 0.11
TRAF3-204ENST00000539721 FERD3LQ96RJ6 166 aa15.72■□□□□ 0.11
TRAF3-204ENST00000539721 HGH1Q9BTY7 390 aa15.72■□□□□ 0.11
TRAF3-204ENST00000539721 NPHS2Q9NP85 383 aa15.72■□□□□ 0.11
TRAF3-204ENST00000539721 PNPOQ9NVS9 261 aa15.72■□□□□ 0.11
TRAF3-204ENST00000539721 STOX2Q9P2F5 926 aaPredicted RBP15.72■□□□□ 0.11
TRAF3-204ENST00000539721 TDRKHQ9Y2W6 561 aaKnown RBP15.72■□□□□ 0.11
TRAF3-204ENST00000539721 ANGPTL3Q9Y5C1 460 aa15.72■□□□□ 0.11
TRAF3-204ENST00000539721 SPAG17Q6Q759 2223 aa15.72■□□□□ 0.11
TRAF3-204ENST00000539721 KMT2EQ8IZD2 1858 aa15.72■□□□□ 0.11
TRAF3-204ENST00000539721 MUC3AQ02505 3323 aa15.72■□□□□ 0.11
TRAF3-204ENST00000539721 K7EPI3 171 aa15.72■□□□□ 0.11
TRAF3-204ENST00000539721 TGDSO95455 350 aa15.72■□□□□ 0.11
TRAF3-204ENST00000539721 CSF2P04141 144 aa15.72■□□□□ 0.11
TRAF3-204ENST00000539721 GNSP15586 552 aa15.72■□□□□ 0.11
TRAF3-204ENST00000539721 CNR2P34972 360 aa15.72■□□□□ 0.11
TRAF3-204ENST00000539721 GDF5P43026 501 aa15.72■□□□□ 0.11
TRAF3-204ENST00000539721 GALNT1Q10472 559 aaPredicted RBP15.72■□□□□ 0.11
TRAF3-204ENST00000539721 PRKG2Q13237 762 aa15.72■□□□□ 0.11
TRAF3-204ENST00000539721 GTF2H2Q13888 395 aa15.72■□□□□ 0.11
TRAF3-204ENST00000539721 KRT33BQ14525 404 aa15.72■□□□□ 0.11
TRAF3-204ENST00000539721 RPE65Q16518 533 aa15.72■□□□□ 0.11
TRAF3-204ENST00000539721 GTF2H2CQ6P1K8 395 aa15.72■□□□□ 0.11
TRAF3-204ENST00000539721 METTL2BQ6P1Q9 378 aaKnown RBP15.72■□□□□ 0.11
TRAF3-204ENST00000539721 AGTRAPQ6RW13 159 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms