RNA–Protein interactions for RNA: ENST00000539655.1

AC243972.3-201, humanhuman

BASIC

Gene AC243972.3, Length 198 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC243972.3-201ENST00000539655 KLHL40Q2TBA0 621 aa2.89□□□□□ -1.95
AC243972.3-201ENST00000539655 XKR3Q5GH77 459 aa2.89□□□□□ -1.95
AC243972.3-201ENST00000539655 KCNT1Q5JUK3 1230 aa2.89□□□□□ -1.95
AC243972.3-201ENST00000539655 SPECC1Q5M775 1068 aa2.89□□□□□ -1.95
AC243972.3-201ENST00000539655 MARCH8Q5T0T0 291 aa2.89□□□□□ -1.95
AC243972.3-201ENST00000539655 LCE3CQ5T5A8 94 aa2.89□□□□□ -1.95
AC243972.3-201ENST00000539655 KRT79Q5XKE5 535 aa2.89□□□□□ -1.95
AC243972.3-201ENST00000539655 ARHGAP17Q68EM7 881 aa2.89□□□□□ -1.95
AC243972.3-201ENST00000539655 TRNP1Q6NT89 227 aa2.89□□□□□ -1.95
AC243972.3-201ENST00000539655 WDR73Q6P4I2 378 aa2.89□□□□□ -1.95
AC243972.3-201ENST00000539655 B3GNT6Q6ZMB0 384 aa2.89□□□□□ -1.95
AC243972.3-201ENST00000539655 CCDC73Q6ZRK6 1079 aa2.89□□□□□ -1.95
AC243972.3-201ENST00000539655 RBM43Q6ZSC3 357 aaKnown RBP2.89□□□□□ -1.95
AC243972.3-201ENST00000539655 C1orf186Q6ZWK4 172 aa2.89□□□□□ -1.95
AC243972.3-201ENST00000539655 RPAINQ86UA6 219 aa2.89□□□□□ -1.95
AC243972.3-201ENST00000539655 KMT5CQ86Y97 462 aa2.89□□□□□ -1.95
AC243972.3-201ENST00000539655 FOXRED2Q8IWF2 684 aa2.89□□□□□ -1.95
AC243972.3-201ENST00000539655 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.89□□□□□ -1.95
AC243972.3-201ENST00000539655 DAW1Q8N136 415 aa2.89□□□□□ -1.95
AC243972.3-201ENST00000539655 SYT2Q8N9I0 419 aaPredicted RBP2.89□□□□□ -1.95
AC243972.3-201ENST00000539655 USP38Q8NB14 1042 aa2.89□□□□□ -1.95
AC243972.3-201ENST00000539655 ERMNQ8TAM6 284 aa2.89□□□□□ -1.95
AC243972.3-201ENST00000539655 SPPL3Q8TCT6 385 aa2.89□□□□□ -1.95
AC243972.3-201ENST00000539655 TAS1R2Q8TE23 839 aa2.89□□□□□ -1.95
AC243972.3-201ENST00000539655 ATP8B4Q8TF62 1192 aa2.89□□□□□ -1.95
AC243972.3-201ENST00000539655 U2AF1L4Q8WU68 220 aaKnown RBP2.89□□□□□ -1.95
AC243972.3-201ENST00000539655 TRAPPC12Q8WVT3 735 aa2.89□□□□□ -1.95
AC243972.3-201ENST00000539655 POF1BQ8WVV4 589 aa2.89□□□□□ -1.95
AC243972.3-201ENST00000539655 CNOT9Q92600 299 aaKnown RBP2.89□□□□□ -1.95
AC243972.3-201ENST00000539655 RUBCNQ92622 972 aa2.89□□□□□ -1.95
AC243972.3-201ENST00000539655 RAD54LQ92698 747 aa2.89□□□□□ -1.95
AC243972.3-201ENST00000539655 DNAJC19Q96DA6 116 aa2.89□□□□□ -1.95
AC243972.3-201ENST00000539655 TIGD1Q96MW7 591 aa2.89□□□□□ -1.95
AC243972.3-201ENST00000539655 PYM1Q9BRP8 204 aaKnown RBP2.89□□□□□ -1.95
AC243972.3-201ENST00000539655 MTG1Q9BT17 334 aaPredicted RBP2.89□□□□□ -1.95
AC243972.3-201ENST00000539655 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.89□□□□□ -1.95
AC243972.3-201ENST00000539655 TNMDQ9H2S6 317 aa2.89□□□□□ -1.95
AC243972.3-201ENST00000539655 SMARCAD1Q9H4L7 1026 aa2.89□□□□□ -1.95
AC243972.3-201ENST00000539655 EPHX3Q9H6B9 360 aa2.89□□□□□ -1.95
AC243972.3-201ENST00000539655 DHX33Q9H6R0 707 aaKnown RBP2.89□□□□□ -1.95
AC243972.3-201ENST00000539655 XPNPEP1Q9NQW7 623 aa2.89□□□□□ -1.95
AC243972.3-201ENST00000539655 ZNF302Q9NR11 478 aa2.89□□□□□ -1.95
AC243972.3-201ENST00000539655 ANKEF1Q9NU02 776 aa2.89□□□□□ -1.95
AC243972.3-201ENST00000539655 DDX19AQ9NUU7 478 aaKnown RBP2.89□□□□□ -1.95
AC243972.3-201ENST00000539655 DDX43Q9NXZ2 648 aaKnown RBP2.89□□□□□ -1.95
AC243972.3-201ENST00000539655 ERAP1Q9NZ08 941 aa2.89□□□□□ -1.95
AC243972.3-201ENST00000539655 CISD1Q9NZ45 108 aaKnown RBP2.89□□□□□ -1.95
AC243972.3-201ENST00000539655 KCND2Q9NZV8 630 aa2.89□□□□□ -1.95
AC243972.3-201ENST00000539655 TINAGQ9UJW2 476 aa2.89□□□□□ -1.95
AC243972.3-201ENST00000539655 ZNF215Q9UL58 517 aaPredicted RBP2.89□□□□□ -1.95
AC243972.3-201ENST00000539655 NRCAMQ92823 1304 aa2.89□□□□□ -1.95
AC243972.3-201ENST00000539655 C5orf42Q9H799 3197 aa2.88□□□□□ -1.95
AC243972.3-201ENST00000539655 A0A0U1RQG5 324 aaPredicted RBP2.88□□□□□ -1.95
AC243972.3-201ENST00000539655 TMEM150BA6NC51 233 aa2.88□□□□□ -1.95
AC243972.3-201ENST00000539655 PABPN1LA6NDY0 278 aaKnown RBP2.88□□□□□ -1.95
AC243972.3-201ENST00000539655 RRN3P2A6NIE6 340 aa2.88□□□□□ -1.95
AC243972.3-201ENST00000539655 E9PMD0 336 aa2.88□□□□□ -1.95
AC243972.3-201ENST00000539655 PER2O15055 1255 aa2.88□□□□□ -1.95
AC243972.3-201ENST00000539655 POLR2DO15514 142 aaKnown RBP2.88□□□□□ -1.95
AC243972.3-201ENST00000539655 CD4P01730 458 aa2.88□□□□□ -1.95
AC243972.3-201ENST00000539655 CNPP09543 421 aaKnown RBP2.88□□□□□ -1.95
AC243972.3-201ENST00000539655 PLA2G4BP0C869 781 aa2.88□□□□□ -1.95
AC243972.3-201ENST00000539655 SMIM10L2AP0DMW4 78 aa2.88□□□□□ -1.95
AC243972.3-201ENST00000539655 SMIM10L2BP0DMW5 78 aa2.88□□□□□ -1.95
AC243972.3-201ENST00000539655 CYP11B2P19099 503 aa2.88□□□□□ -1.95
AC243972.3-201ENST00000539655 PTMSP20962 102 aa2.88□□□□□ -1.95
AC243972.3-201ENST00000539655 S1PR1P21453 382 aa2.88□□□□□ -1.95
AC243972.3-201ENST00000539655 CCT6AP40227 531 aaKnown RBP2.88□□□□□ -1.95
AC243972.3-201ENST00000539655 UBA7P41226 1012 aa2.88□□□□□ -1.95
AC243972.3-201ENST00000539655 SYKP43405 635 aa2.88□□□□□ -1.95
AC243972.3-201ENST00000539655 CLCNKAP51800 687 aa2.88□□□□□ -1.95
AC243972.3-201ENST00000539655 CLDN2P57739 230 aa2.88□□□□□ -1.95
AC243972.3-201ENST00000539655 SP4Q02446 784 aa2.88□□□□□ -1.95
AC243972.3-201ENST00000539655 CCNYL2Q5T2Q4 361 aa2.88□□□□□ -1.95
AC243972.3-201ENST00000539655 CXCL17Q6UXB2 119 aa2.88□□□□□ -1.95
AC243972.3-201ENST00000539655 MOB3CQ70IA8 216 aa2.88□□□□□ -1.95
AC243972.3-201ENST00000539655 MTSS1LQ765P7 747 aa2.88□□□□□ -1.95
AC243972.3-201ENST00000539655 ANKRD33Q7Z3H0 272 aa2.88□□□□□ -1.95
AC243972.3-201ENST00000539655 SERINC5Q86VE9 423 aa2.88□□□□□ -1.95
AC243972.3-201ENST00000539655 ODF3L1Q8IXM7 274 aa2.88□□□□□ -1.95
AC243972.3-201ENST00000539655 PDILTQ8N807 584 aa2.88□□□□□ -1.95
AC243972.3-201ENST00000539655 IQUBQ8NA54 791 aa2.88□□□□□ -1.95
AC243972.3-201ENST00000539655 DBF4BQ8NFT6 615 aa2.88□□□□□ -1.95
AC243972.3-201ENST00000539655 LGALS12Q96DT0 336 aa2.88□□□□□ -1.95
AC243972.3-201ENST00000539655 CALML4Q96GE6 196 aa2.88□□□□□ -1.95
AC243972.3-201ENST00000539655 DEFB118Q96PH6 123 aa2.88□□□□□ -1.95
AC243972.3-201ENST00000539655 LITAFQ99732 161 aa2.88□□□□□ -1.95
AC243972.3-201ENST00000539655 KXD1Q9BQD3 176 aa2.88□□□□□ -1.95
AC243972.3-201ENST00000539655 REEP2Q9BRK0 252 aa2.88□□□□□ -1.95
AC243972.3-201ENST00000539655 HAUS8Q9BT25 410 aa2.88□□□□□ -1.95
AC243972.3-201ENST00000539655 LRRC1Q9BTT6 524 aa2.88□□□□□ -1.95
AC243972.3-201ENST00000539655 TIPINQ9BVW5 301 aa2.88□□□□□ -1.95
AC243972.3-201ENST00000539655 STRA6Q9BX79 667 aa2.88□□□□□ -1.95
AC243972.3-201ENST00000539655 NFKBIZQ9BYH8 718 aa2.88□□□□□ -1.95
AC243972.3-201ENST00000539655 TRIM9Q9C026 710 aa2.88□□□□□ -1.95
AC243972.3-201ENST00000539655 CSTL1Q9H114 145 aa2.88□□□□□ -1.95
AC243972.3-201ENST00000539655 CLSTN2Q9H4D0 955 aa2.88□□□□□ -1.95
AC243972.3-201ENST00000539655 ST6GALNAC4Q9H4F1 302 aa2.88□□□□□ -1.95
AC243972.3-201ENST00000539655 STN1Q9H668 368 aaKnown RBP2.88□□□□□ -1.95
AC243972.3-201ENST00000539655 AZI2Q9H6S1 392 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms