RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 ERVK-19Q9WJR5 959 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 FOXA2Q9Y261 457 aaPredicted RBP1.01□□□□□ -2.25
HIF1A-204ENST00000539097 KCNK7Q9Y2U2 307 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 HS3ST3B1Q9Y662 390 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 NPHP3Q7Z494 1330 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 FAM230AA0A1W2PPH8 454 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 NEMP2A6NFY4 417 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 EIF3CLB5ME19 914 aaKnown RBP1.01□□□□□ -2.25
HIF1A-204ENST00000539097 PLK4O00444 970 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 HS3ST1O14792 307 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 BUB1O43683 1085 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 ZBTB14O43829 449 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 SOCS5O75159 536 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 NDUFS7O75251 213 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 RBMXL2O75526 392 aaKnown RBP1.01□□□□□ -2.25
HIF1A-204ENST00000539097 CSDE1O75534 798 aaKnown RBP1.01□□□□□ -2.25
HIF1A-204ENST00000539097 ACSL3O95573 720 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 NFATC1O95644 943 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 APOHP02749 345 aaPredicted RBP1.01□□□□□ -2.25
HIF1A-204ENST00000539097 HMOX1P09601 288 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 OR52Z1P0C646 297 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 CDK4P11802 303 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 CSF2RAP15509 400 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 CTNNA1P35221 906 aaKnown RBP1.01□□□□□ -2.25
HIF1A-204ENST00000539097 CCR10P46092 362 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 ZNF132P52740 706 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 CRYBA2P53672 197 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 POLGP54098 1239 aaPredicted RBP1.01□□□□□ -2.25
HIF1A-204ENST00000539097 CSE1LP55060 971 aaKnown RBP1.01□□□□□ -2.25
HIF1A-204ENST00000539097 GMFBP60983 142 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 ABATP80404 500 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 MAD2L1Q13257 205 aaPredicted RBP1.01□□□□□ -2.25
HIF1A-204ENST00000539097 DPYSQ14117 519 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 MELKQ14680 651 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 PPA1Q15181 289 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 HAGHQ16775 308 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 TATDN3Q17R31 274 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 LETM2Q2VYF4 491 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 EDRF1Q3B7T1 1238 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 EPHA10Q5JZY3 1008 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 ELFN2Q5R3F8 820 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 ZDHHC20Q5W0Z9 365 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 METTL7BQ6UX53 244 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 CYB5R4Q7L1T6 521 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 GALNTL5Q7Z4T8 443 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 CENPVQ7Z7K6 275 aaPredicted RBP1.01□□□□□ -2.25
HIF1A-204ENST00000539097 PIM3Q86V86 326 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 EGFL6Q8IUX8 553 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 CCDC60Q8IWA6 550 aaPredicted RBP1.01□□□□□ -2.25
HIF1A-204ENST00000539097 ODF3L1Q8IXM7 274 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 PELI3Q8N2H9 469 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 OTUD6BQ8N6M0 293 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 ZNF548Q8NEK5 533 aaPredicted RBP1.01□□□□□ -2.25
HIF1A-204ENST00000539097 OR4D10Q8NGI6 311 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 OCC1Q8TAD7 63 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 GDAP1Q8TB36 358 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 ZNF606Q8WXB4 792 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 MR1Q95460 341 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 TMEM18Q96B42 140 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 MOB3AQ96BX8 217 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 BICD1Q96G01 975 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 RBM18Q96H35 190 aaKnown RBP1.01□□□□□ -2.25
HIF1A-204ENST00000539097 TMEM19Q96HH6 336 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 ZNF830Q96NB3 372 aaPredicted RBP1.01□□□□□ -2.25
HIF1A-204ENST00000539097 ZNF582Q96NG8 517 aaPredicted RBP1.01□□□□□ -2.25
HIF1A-204ENST00000539097 CCDC3Q9BQI4 270 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 SLC25A33Q9BSK2 321 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 NAPBQ9H115 298 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 HSD3B7Q9H2F3 369 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 DDX31Q9H8H2 851 aaKnown RBP1.01□□□□□ -2.25
HIF1A-204ENST00000539097 XAB2Q9HCS7 855 aaKnown RBP1.01□□□□□ -2.25
HIF1A-204ENST00000539097 THSD1Q9NS62 852 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 FGF21Q9NSA1 209 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 C11orf21Q9P2W6 132 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 TRIP12Q14669 1992 aaPredicted RBP1.01□□□□□ -2.25
HIF1A-204ENST00000539097 SMARCA4P51532 1647 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 ALKQ9UM73 1620 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 A0A1B0GVT2 93 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 hCG_1809904A0A1W2PP81 198 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 A0A1W2PPE2 198 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 A0A1W2PR64 198 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 BOLA2-SMG1P6H3BVE0 249 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 TMEM189-UBE2V1I3L0A0 370 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 E2F3O00716 465 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 NDC80O14777 642 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 GCATO75600 419 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 FGF19O95750 216 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 ACP2P11117 423 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 NR1D1P20393 614 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 IGFBP5P24593 272 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 PCGF2P35227 344 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 MAGEA11P43364 429 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 NPY4RP50391 375 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 PRELPP51888 382 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 HUNKP57058 714 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 UBE2V1Q13404 147 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 KCNC3Q14003 757 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 CTTNQ14247 550 aaKnown RBP1□□□□□ -2.25
HIF1A-204ENST00000539097 E2F5Q15329 346 aa1□□□□□ -2.25
HIF1A-204ENST00000539097 NPTX1Q15818 432 aa1□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms