RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 PROS1P07225 676 aa13.79□□□□□ -0.2
CD4-208ENST00000538827 CELA2BP08218 269 aaPredicted RBP13.79□□□□□ -0.2
CD4-208ENST00000538827 ENO2P09104 434 aaPredicted RBP13.79□□□□□ -0.2
CD4-208ENST00000538827 FGF3P11487 239 aaPredicted RBP13.79□□□□□ -0.2
CD4-208ENST00000538827 KCNC1P48547 511 aa13.79□□□□□ -0.2
CD4-208ENST00000538827 KRT33BQ14525 404 aa13.79□□□□□ -0.2
CD4-208ENST00000538827 PFKFB4Q16877 469 aa13.79□□□□□ -0.2
CD4-208ENST00000538827 PRRT3Q5FWE3 981 aa13.79□□□□□ -0.2
CD4-208ENST00000538827 FBXO48Q5FWF7 155 aa13.79□□□□□ -0.2
CD4-208ENST00000538827 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.79□□□□□ -0.2
CD4-208ENST00000538827 CFAP157Q5JU67 520 aa13.79□□□□□ -0.2
CD4-208ENST00000538827 METRNLQ641Q3 311 aa13.79□□□□□ -0.2
CD4-208ENST00000538827 UNC5DQ6UXZ4 953 aa13.79□□□□□ -0.2
CD4-208ENST00000538827 TAF8Q7Z7C8 310 aa13.79□□□□□ -0.2
CD4-208ENST00000538827 SLC22A9Q8IVM8 553 aa13.79□□□□□ -0.2
CD4-208ENST00000538827 TMEM151AQ8N4L1 468 aa13.79□□□□□ -0.2
CD4-208ENST00000538827 MCOLN3Q8TDD5 553 aa13.79□□□□□ -0.2
CD4-208ENST00000538827 LMX1AQ8TE12 382 aa13.79□□□□□ -0.2
CD4-208ENST00000538827 ASB11Q8WXH4 323 aa13.79□□□□□ -0.2
CD4-208ENST00000538827 DLG3Q92796 817 aa13.79□□□□□ -0.2
CD4-208ENST00000538827 CCDC126Q96EE4 140 aa13.79□□□□□ -0.2
CD4-208ENST00000538827 TMEM237Q96Q45 408 aa13.79□□□□□ -0.2
CD4-208ENST00000538827 LRRC61Q9BV99 259 aa13.79□□□□□ -0.2
CD4-208ENST00000538827 ZDHHC5Q9C0B5 715 aa13.79□□□□□ -0.2
CD4-208ENST00000538827 PARVBQ9HBI1 364 aa13.79□□□□□ -0.2
CD4-208ENST00000538827 PARD6AQ9NPB6 346 aa13.79□□□□□ -0.2
CD4-208ENST00000538827 PRDM8Q9NQV8 689 aa13.79□□□□□ -0.2
CD4-208ENST00000538827 TRNAU1APQ9NX07 287 aaKnown RBP13.79□□□□□ -0.2
CD4-208ENST00000538827 KLF15Q9UIH9 416 aa13.79□□□□□ -0.2
CD4-208ENST00000538827 RAB23Q9ULC3 237 aa13.79□□□□□ -0.2
CD4-208ENST00000538827 PDE10AQ9Y233 779 aa13.79□□□□□ -0.2
CD4-208ENST00000538827 WDR37Q9Y2I8 494 aa13.79□□□□□ -0.2
CD4-208ENST00000538827 TDRKHQ9Y2W6 561 aaKnown RBP13.79□□□□□ -0.2
CD4-208ENST00000538827 TCP11X1B4DZS4 312 aa13.78□□□□□ -0.2
CD4-208ENST00000538827 TRIM13O60858 407 aa13.78□□□□□ -0.2
CD4-208ENST00000538827 SDC3O75056 442 aa13.78□□□□□ -0.2
CD4-208ENST00000538827 H2AFYO75367 372 aaKnown RBP13.78□□□□□ -0.2
CD4-208ENST00000538827 IPO13O94829 963 aaKnown RBP13.78□□□□□ -0.2
CD4-208ENST00000538827 RPN2P04844 631 aa13.78□□□□□ -0.2
CD4-208ENST00000538827 SERPINE1P05121 402 aa13.78□□□□□ -0.2
CD4-208ENST00000538827 VIMP08670 466 aaKnown RBP13.78□□□□□ -0.2
CD4-208ENST00000538827 ANXA5P08758 320 aa13.78□□□□□ -0.2
CD4-208ENST00000538827 MTHFD2P13995 350 aa13.78□□□□□ -0.2
CD4-208ENST00000538827 HOXB3P14651 431 aaPredicted RBP13.78□□□□□ -0.2
CD4-208ENST00000538827 NME1P15531 152 aaKnown RBP13.78□□□□□ -0.2
CD4-208ENST00000538827 EEF1DP29692 281 aaKnown RBP13.78□□□□□ -0.2
CD4-208ENST00000538827 RPIAP49247 311 aa13.78□□□□□ -0.2
CD4-208ENST00000538827 NFKB2Q00653 900 aa13.78□□□□□ -0.2
CD4-208ENST00000538827 C18orf21Q32NC0 220 aaPredicted RBP13.78□□□□□ -0.2
CD4-208ENST00000538827 CCSMST1Q4G0I0 132 aa13.78□□□□□ -0.2
CD4-208ENST00000538827 ATG16L1Q676U5 607 aa13.78□□□□□ -0.2
CD4-208ENST00000538827 FAM47EQ6ZV65 393 aa13.78□□□□□ -0.2
CD4-208ENST00000538827 DCUN1D3Q8IWE4 304 aa13.78□□□□□ -0.2
CD4-208ENST00000538827 PDPRQ8NCN5 879 aa13.78□□□□□ -0.2
CD4-208ENST00000538827 OR5AR1Q8NGP9 310 aa13.78□□□□□ -0.2
CD4-208ENST00000538827 ZNF75CPQ92670 426 aaPredicted RBP13.78□□□□□ -0.2
CD4-208ENST00000538827 TFGQ92734 400 aaPredicted RBP13.78□□□□□ -0.2
CD4-208ENST00000538827 FERD3LQ96RJ6 166 aa13.78□□□□□ -0.2
CD4-208ENST00000538827 SLC12A9Q9BXP2 914 aa13.78□□□□□ -0.2
CD4-208ENST00000538827 TRIT1Q9H3H1 467 aaKnown RBP13.78□□□□□ -0.2
CD4-208ENST00000538827 MANSC1Q9H8J5 431 aa13.78□□□□□ -0.2
CD4-208ENST00000538827 RDH14Q9HBH5 336 aa13.78□□□□□ -0.2
CD4-208ENST00000538827 OXSMQ9NWU1 459 aa13.78□□□□□ -0.2
CD4-208ENST00000538827 SIRPGQ9P1W8 387 aa13.78□□□□□ -0.2
CD4-208ENST00000538827 TBC1D29Q9UFV1 150 aa13.78□□□□□ -0.2
CD4-208ENST00000538827 PILRBQ9UKJ0 227 aa13.78□□□□□ -0.2
CD4-208ENST00000538827 ADAM21Q9UKJ8 722 aa13.78□□□□□ -0.2
CD4-208ENST00000538827 PLAGL1Q9UM63 463 aa13.78□□□□□ -0.2
CD4-208ENST00000538827 DOLKQ9UPQ8 538 aa13.78□□□□□ -0.2
CD4-208ENST00000538827 SNX11Q9Y5W9 270 aa13.78□□□□□ -0.2
CD4-208ENST00000538827 ST14Q9Y5Y6 855 aa13.78□□□□□ -0.2
CD4-208ENST00000538827 CEP295Q9C0D2 2601 aa13.78□□□□□ -0.2
CD4-208ENST00000538827 ADAMTS9Q9P2N4 1935 aa13.78□□□□□ -0.2
CD4-208ENST00000538827 SDK1Q7Z5N4 2213 aa13.78□□□□□ -0.2
CD4-208ENST00000538827 LRRC14BA6NHZ5 514 aa13.77□□□□□ -0.21
CD4-208ENST00000538827 OR52A4PA6NMU1 304 aa13.77□□□□□ -0.21
CD4-208ENST00000538827 B4DGG1 531 aa13.77□□□□□ -0.21
CD4-208ENST00000538827 GFYI3L273 518 aa13.77□□□□□ -0.21
CD4-208ENST00000538827 SIX3O95343 332 aaPredicted RBP13.77□□□□□ -0.21
CD4-208ENST00000538827 C1orf105O95561 183 aa13.77□□□□□ -0.21
CD4-208ENST00000538827 CSF2P04141 144 aa13.77□□□□□ -0.21
CD4-208ENST00000538827 ACADLP28330 430 aa13.77□□□□□ -0.21
CD4-208ENST00000538827 LSP1P33241 339 aa13.77□□□□□ -0.21
CD4-208ENST00000538827 HSPA7P48741 367 aa13.77□□□□□ -0.21
CD4-208ENST00000538827 AGTR2P50052 363 aa13.77□□□□□ -0.21
CD4-208ENST00000538827 PRKAA2P54646 552 aa13.77□□□□□ -0.21
CD4-208ENST00000538827 ALDH18A1P54886 795 aaKnown RBP13.77□□□□□ -0.21
CD4-208ENST00000538827 BST1Q10588 318 aa13.77□□□□□ -0.21
CD4-208ENST00000538827 STX3Q13277 289 aa13.77□□□□□ -0.21
CD4-208ENST00000538827 SETDB1Q15047 1291 aa13.77□□□□□ -0.21
CD4-208ENST00000538827 UAP1L1Q3KQV9 507 aa13.77□□□□□ -0.21
CD4-208ENST00000538827 PRAMEF14Q5SWL7 426 aa13.77□□□□□ -0.21
CD4-208ENST00000538827 LAIR1Q6GTX8 287 aa13.77□□□□□ -0.21
CD4-208ENST00000538827 TTC23LQ6PF05 361 aa13.77□□□□□ -0.21
CD4-208ENST00000538827 NRROSQ86YC3 692 aa13.77□□□□□ -0.21
CD4-208ENST00000538827 SYT12Q8IV01 421 aa13.77□□□□□ -0.21
CD4-208ENST00000538827 TRIM48Q8IWZ4 208 aa13.77□□□□□ -0.21
CD4-208ENST00000538827 PHC3Q8NDX5 983 aa13.77□□□□□ -0.21
CD4-208ENST00000538827 RAB3IL1Q8TBN0 382 aa13.77□□□□□ -0.21
CD4-208ENST00000538827 PPP4R1Q8TF05 950 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms