RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 RADILQ96JH8 1075 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 Q96MT0 163 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 CCDC115Q96NT0 180 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 RBM14Q96PK6 669 aaKnown RBP12.2□□□□□ -0.46
USP3-203ENST00000538686 PPP1R2P1Q96PQ5 205 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 MCCC1Q96RQ3 725 aaPredicted RBP12.2□□□□□ -0.46
USP3-203ENST00000538686 PEBP4Q96S96 227 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 SLC9A7Q96T83 725 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 MXRA8Q9BRK3 442 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 LTB4R2Q9NPC1 389 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 SETD4Q9NVD3 440 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 MUTYHQ9UIF7 546 aa12.2□□□□□ -0.46
USP3-203ENST00000538686 SH3D21A4FU49 640 aa12.19□□□□□ -0.46
USP3-203ENST00000538686 SOWAHBA6NEL2 793 aa12.19□□□□□ -0.46
USP3-203ENST00000538686 SPATA31C2B4DYI2 1134 aa12.19□□□□□ -0.46
USP3-203ENST00000538686 SLC43A1O75387 559 aa12.19□□□□□ -0.46
USP3-203ENST00000538686 PSIP1O75475 530 aaKnown RBP12.19□□□□□ -0.46
USP3-203ENST00000538686 HLA-EP13747 358 aa12.19□□□□□ -0.46
USP3-203ENST00000538686 HNRNPLP14866 589 aaKnown RBP eCLIP12.19□□□□□ -0.465e-18■■■■□ 21.7
USP3-203ENST00000538686 ITGB6P18564 788 aa12.19□□□□□ -0.46
USP3-203ENST00000538686 IGFBP5P24593 272 aa12.19□□□□□ -0.46
USP3-203ENST00000538686 YWHAQP27348 245 aa12.19□□□□□ -0.46
USP3-203ENST00000538686 CLCNKAP51800 687 aa12.19□□□□□ -0.46
USP3-203ENST00000538686 AKR1D1P51857 326 aa12.19□□□□□ -0.46
USP3-203ENST00000538686 EVA1CP58658 441 aa12.19□□□□□ -0.46
USP3-203ENST00000538686 DAB2P98082 770 aa12.19□□□□□ -0.46
USP3-203ENST00000538686 ZNF91Q05481 1191 aa12.19□□□□□ -0.46
USP3-203ENST00000538686 MAD2L1BPQ15013 274 aaPredicted RBP12.19□□□□□ -0.46
USP3-203ENST00000538686 PCBP1Q15365 356 aaKnown RBP eCLIP12.19□□□□□ -0.46
USP3-203ENST00000538686 FAM83EQ2M2I3 478 aa12.19□□□□□ -0.46
USP3-203ENST00000538686 PAN2Q504Q3 1202 aaKnown RBP12.19□□□□□ -0.46
USP3-203ENST00000538686 RABL3Q5HYI8 236 aa12.19□□□□□ -0.46
USP3-203ENST00000538686 PDZK1Q5T2W1 519 aa12.19□□□□□ -0.46
USP3-203ENST00000538686 DPP8Q6V1X1 898 aaPredicted RBP12.19□□□□□ -0.46
USP3-203ENST00000538686 LRRC8DQ7L1W4 858 aa12.19□□□□□ -0.46
USP3-203ENST00000538686 XYLT1Q86Y38 959 aa12.19□□□□□ -0.46
USP3-203ENST00000538686 FAM9CQ8IZT9 166 aa12.19□□□□□ -0.46
USP3-203ENST00000538686 CENPLQ8N0S6 344 aaPredicted RBP12.19□□□□□ -0.46
USP3-203ENST00000538686 DUSP18Q8NEJ0 188 aa12.19□□□□□ -0.46
USP3-203ENST00000538686 OR52E4Q8NGH9 312 aa12.19□□□□□ -0.46
USP3-203ENST00000538686 GABARAPL1Q9H0R8 117 aa12.19□□□□□ -0.46
USP3-203ENST00000538686 SYNDIG1Q9H7V2 258 aa12.19□□□□□ -0.46
USP3-203ENST00000538686 GORASP2Q9H8Y8 452 aa12.19□□□□□ -0.46
USP3-203ENST00000538686 CATSPERZQ9NTU4 200 aa12.19□□□□□ -0.46
USP3-203ENST00000538686 COA4Q9NYJ1 87 aa12.19□□□□□ -0.46
USP3-203ENST00000538686 MAP3K20Q9NYL2 800 aaKnown RBP12.19□□□□□ -0.46
USP3-203ENST00000538686 TINAGQ9UJW2 476 aa12.19□□□□□ -0.46
USP3-203ENST00000538686 BTRCQ9Y297 605 aa12.19□□□□□ -0.46
USP3-203ENST00000538686 MAB21L2Q9Y586 359 aa12.19□□□□□ -0.46
USP3-203ENST00000538686 DFFAO00273 331 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 RGS20O76081 388 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 NTSR2O95665 410 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 CFBP00751 764 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 ZNF3P17036 446 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 GPD1P21695 349 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 BMP8BP34820 402 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 DCTP40126 519 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 KIR2DL3P43628 341 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 LCN1P1Q5VSP4 162 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 SLC39A4Q6P5W5 647 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 KDELC1Q6UW63 502 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 CCDC149Q6ZUS6 474 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 SLC26A9Q7LBE3 791 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 BMP8AQ7Z5Y6 402 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 RNF180Q86T96 592 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 KCNMB4Q86W47 210 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 SCUBE3Q8IX30 993 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 ARL6IP6Q8N6S5 226 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 COLGALT1Q8NBJ5 622 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 SRFBP1Q8NEF9 429 aaKnown RBP12.18□□□□□ -0.46
USP3-203ENST00000538686 PCDH19Q8TAB3 1148 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 RAET1EQ8TD07 263 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 BTN2A2Q8WVV5 523 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 HTR3CQ8WXA8 447 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 COQ8BQ96D53 544 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 CRELD1Q96HD1 420 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 FCRL3Q96P31 734 aaPredicted RBP12.18□□□□□ -0.46
USP3-203ENST00000538686 GSX2Q9BZM3 304 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 MAGIXQ9H6Y5 334 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 ABCB8Q9NUT2 735 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 EXD2Q9NVH0 621 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 CD274Q9NZQ7 290 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 DPP7Q9UHL4 492 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 TMEFF2Q9UIK5 374 aaPredicted RBP12.18□□□□□ -0.46
USP3-203ENST00000538686 VPS9D1Q9Y2B5 631 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 DTX4Q9Y2E6 619 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 H0YCG3 227 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 HNRNPDLO14979 420 aaKnown RBP12.18□□□□□ -0.46
USP3-203ENST00000538686 OGTO15294 1046 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 SEC22BO75396 215 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 IPO13O94829 963 aaKnown RBP12.18□□□□□ -0.46
USP3-203ENST00000538686 DARSP14868 501 aaKnown RBP12.18□□□□□ -0.46
USP3-203ENST00000538686 GGT1P19440 569 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 MAP2K3P46734 347 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 HK3P52790 923 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 EIF6P56537 245 aaKnown RBP12.18□□□□□ -0.46
USP3-203ENST00000538686 RAB10P61026 200 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 ERVK-8P63133 956 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 HSF2Q03933 536 aa12.18□□□□□ -0.46
USP3-203ENST00000538686 RCAN2Q14206 197 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms