RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 KHKP50053 298 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 TAS2R39P59534 338 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 SLC25A11Q02978 314 aaKnown RBP5.26□□□□□ -1.57
LRP6-203ENST00000538239 INCA1Q0VD86 236 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 TRIM25Q14258 630 aaKnown RBP5.26□□□□□ -1.57
LRP6-203ENST00000538239 PAOXQ6QHF9 649 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 KIAA0408Q6ZU52 694 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 THOC6Q86W42 341 aaKnown RBP5.26□□□□□ -1.57
LRP6-203ENST00000538239 SPPL2CQ8IUH8 684 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 TMEM156Q8N614 296 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 ANKLE1Q8NAG6 615 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 FAM13CQ8NE31 585 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 TTLQ8NG68 377 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 DLG3Q92796 817 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 IGSF8Q969P0 613 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 OTUB2Q96DC9 234 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 HHIPQ96QV1 700 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 RBCK1Q9BYM8 510 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 HCN2Q9UL51 889 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 A0A1W2PQU0 124 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 PRR5-ARHGAP8B1AHC4 643 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 ITGB1P05556 798 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 HOXD13P35453 343 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 CCR10P46092 362 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 PXNP49023 591 aaPredicted RBP5.25□□□□□ -1.57
LRP6-203ENST00000538239 DUSP3P51452 185 aaPredicted RBP5.25□□□□□ -1.57
LRP6-203ENST00000538239 ARHGAP8P85298 464 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 LRRC26Q2I0M4 334 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 RNF43Q68DV7 783 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 ADGRD1Q6QNK2 874 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 KLHL24Q6TFL4 600 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 PEX5LQ8IYB4 626 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 TTC9BQ8N6N2 239 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 RGMAQ96B86 450 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 NMD3Q96D46 503 aaKnown RBP5.25□□□□□ -1.57
LRP6-203ENST00000538239 CASD1Q96PB1 797 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 PEBP4Q96S96 227 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 CRISPLD1Q9H336 500 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 MRPL39Q9NYK5 338 aaKnown RBP5.25□□□□□ -1.57
LRP6-203ENST00000538239 SH3GLB1Q9Y371 365 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 RBM7Q9Y580 266 aaKnown RBP5.25□□□□□ -1.57
LRP6-203ENST00000538239 KAT6AQ92794 2004 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 MYH6P13533 1939 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 TPD52L2O43399 206 aaKnown RBP5.25□□□□□ -1.57
LRP6-203ENST00000538239 SYPP08247 313 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 ARSAP15289 507 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 RFTN2Q52LD8 501 aaPredicted RBP5.25□□□□□ -1.57
LRP6-203ENST00000538239 TNFAIP8L2Q6P589 184 aaPredicted RBP5.25□□□□□ -1.57
LRP6-203ENST00000538239 CLNKQ7Z7G1 428 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 GHDCQ8N2G8 530 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 ZNF781Q8N8C0 355 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 ZNF540Q8NDQ6 660 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 SPOCK2Q92563 424 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 KLRF1Q9NZS2 232 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 IKZF2Q9UKS7 526 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 DHRS12A0PJE2 317 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 FAM221BA6H8Z2 402 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 BBIP1A8MTZ0 92 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 PSMD11O00231 422 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 KPNA4O00629 521 aaPredicted RBP5.25□□□□□ -1.57
LRP6-203ENST00000538239 PMM2O15305 246 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 ECI2O75521 394 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 PSMG1O95456 288 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 OXTRP30559 389 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 HOXA11P31270 313 aaPredicted RBP5.25□□□□□ -1.57
LRP6-203ENST00000538239 HNF1BP35680 557 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 HNMTP50135 292 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 MRPS35P82673 323 aaKnown RBP5.25□□□□□ -1.57
LRP6-203ENST00000538239 TMEM115Q12893 351 aaPredicted RBP5.25□□□□□ -1.57
LRP6-203ENST00000538239 ARMC4Q5T2S8 1044 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 GPRC6AQ5T6X5 926 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 NEK5Q6P3R8 708 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 CRTC1Q6UUV9 634 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 MBOAT1Q6ZNC8 495 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 NET1Q7Z628 596 aaPredicted RBP5.25□□□□□ -1.57
LRP6-203ENST00000538239 OAFQ86UD1 273 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 APCDD1Q8J025 514 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 TERB1Q8NA31 727 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 EEF1AKMT1Q8WVE0 214 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 MIEF2Q96C03 454 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 SLC25A36Q96CQ1 311 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 TRNT1Q96Q11 434 aaKnown RBP5.25□□□□□ -1.57
LRP6-203ENST00000538239 TUBGCP5Q96RT8 1024 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 COQ7Q99807 217 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 SPATA9Q9BWV2 254 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 XKR8Q9H6D3 395 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 KCND1Q9NSA2 647 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 PDP2Q9P2J9 529 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 SAMD4AQ9UPU9 718 aaKnown RBP5.25□□□□□ -1.57
LRP6-203ENST00000538239 MYRFQ9Y2G1 1151 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 DDX60Q8IY21 1712 aaKnown RBP5.25□□□□□ -1.57
LRP6-203ENST00000538239 TRPM3Q9HCF6 1732 aaPredicted RBP5.25□□□□□ -1.57
LRP6-203ENST00000538239 SNX3O60493 162 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 REM1O75628 298 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 STC2O76061 302 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 IL7RP16871 459 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 MPIP34949 423 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 PTPN5P54829 565 aa5.25□□□□□ -1.57
LRP6-203ENST00000538239 CSTF1Q05048 431 aaKnown RBP5.25□□□□□ -1.57
LRP6-203ENST00000538239 GFOD2Q3B7J2 385 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms