RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 TAC1P20366 129 aa15.24■□□□□ 0.03
SFSWAP-206ENST00000537582 CYP2A7P20853 494 aa15.24■□□□□ 0.03
SFSWAP-206ENST00000537582 GDF5P43026 501 aa15.24■□□□□ 0.03
SFSWAP-206ENST00000537582 PRKAA2P54646 552 aa15.24■□□□□ 0.03
SFSWAP-206ENST00000537582 NAGLUP54802 743 aa15.24■□□□□ 0.03
SFSWAP-206ENST00000537582 PDK4Q16654 411 aa15.24■□□□□ 0.03
SFSWAP-206ENST00000537582 DUOXA1Q1HG43 343 aa15.24■□□□□ 0.03
SFSWAP-206ENST00000537582 TRIM61Q5EBN2 209 aa15.24■□□□□ 0.03
SFSWAP-206ENST00000537582 UNC5DQ6UXZ4 953 aa15.24■□□□□ 0.03
SFSWAP-206ENST00000537582 PDPRQ8NCN5 879 aa15.24■□□□□ 0.03
SFSWAP-206ENST00000537582 PPFIBP2Q8ND30 876 aa15.24■□□□□ 0.03
SFSWAP-206ENST00000537582 FAM46DQ8NEK8 389 aa15.24■□□□□ 0.03
SFSWAP-206ENST00000537582 ZNF75CPQ92670 426 aaPredicted RBP15.24■□□□□ 0.03
SFSWAP-206ENST00000537582 RHBDF1Q96CC6 855 aa15.24■□□□□ 0.03
SFSWAP-206ENST00000537582 NSUN5Q96P11 429 aaKnown RBP15.24■□□□□ 0.03
SFSWAP-206ENST00000537582 FERD3LQ96RJ6 166 aa15.24■□□□□ 0.03
SFSWAP-206ENST00000537582 ELF4Q99607 663 aaPredicted RBP15.24■□□□□ 0.03
SFSWAP-206ENST00000537582 GATA5Q9BWX5 397 aaPredicted RBP15.24■□□□□ 0.03
SFSWAP-206ENST00000537582 C20orf27Q9GZN8 174 aa15.24■□□□□ 0.03
SFSWAP-206ENST00000537582 RDH14Q9HBH5 336 aa15.24■□□□□ 0.03
SFSWAP-206ENST00000537582 CAPN10Q9HC96 672 aa15.24■□□□□ 0.03
SFSWAP-206ENST00000537582 ADAM21Q9UKJ8 722 aa15.24■□□□□ 0.03
SFSWAP-206ENST00000537582 PCOLCE2Q9UKZ9 415 aa15.24■□□□□ 0.03
SFSWAP-206ENST00000537582 FANCMQ8IYD8 2048 aa15.23■□□□□ 0.03
SFSWAP-206ENST00000537582 GPR179Q6PRD1 2367 aa15.23■□□□□ 0.03
SFSWAP-206ENST00000537582 TDRD6O60522 2096 aaKnown RBP15.23■□□□□ 0.03
SFSWAP-206ENST00000537582 CUL9Q8IWT3 2517 aa15.23■□□□□ 0.03
SFSWAP-206ENST00000537582 ITM2AO43736 263 aa15.23■□□□□ 0.03
SFSWAP-206ENST00000537582 LYPLA1O75608 230 aaPredicted RBP15.23■□□□□ 0.03
SFSWAP-206ENST00000537582 EPN2O95208 641 aa15.23■□□□□ 0.03
SFSWAP-206ENST00000537582 SLC16A8O95907 504 aa15.23■□□□□ 0.03
SFSWAP-206ENST00000537582 ENO2P09104 434 aaPredicted RBP15.23■□□□□ 0.03
SFSWAP-206ENST00000537582 NEFHP12036 1026 aa15.23■□□□□ 0.03
SFSWAP-206ENST00000537582 F3P13726 295 aa15.23■□□□□ 0.03
SFSWAP-206ENST00000537582 TSPAN8P19075 237 aa15.23■□□□□ 0.03
SFSWAP-206ENST00000537582 MAP4P27816 1152 aaKnown RBP15.23■□□□□ 0.03
SFSWAP-206ENST00000537582 EEF1DP29692 281 aaKnown RBP15.23■□□□□ 0.03
SFSWAP-206ENST00000537582 MPLP40238 635 aa15.23■□□□□ 0.03
SFSWAP-206ENST00000537582 SLC19A1P41440 591 aa15.23■□□□□ 0.03
SFSWAP-206ENST00000537582 HSPA7P48741 367 aa15.23■□□□□ 0.03
SFSWAP-206ENST00000537582 NUBP1P53384 320 aa15.23■□□□□ 0.03
SFSWAP-206ENST00000537582 HNRNPKP61978 463 aaKnown RBP eCLIP15.23■□□□□ 0.03
SFSWAP-206ENST00000537582 SETDB1Q15047 1291 aa15.23■□□□□ 0.03
SFSWAP-206ENST00000537582 DEFB133Q30KQ1 61 aa15.23■□□□□ 0.03
SFSWAP-206ENST00000537582 HLA-BQ31612 363 aa15.23■□□□□ 0.03
SFSWAP-206ENST00000537582 LIPMQ5VYY2 423 aa15.23■□□□□ 0.03
SFSWAP-206ENST00000537582 ZC3H14Q6PJT7 736 aaKnown RBP15.23■□□□□ 0.03
SFSWAP-206ENST00000537582 WASH2PQ6VEQ5 465 aa15.23■□□□□ 0.03
SFSWAP-206ENST00000537582 NAGSQ8N159 534 aa15.23■□□□□ 0.03
SFSWAP-206ENST00000537582 C2orf73Q8N5S3 287 aaPredicted RBP15.23■□□□□ 0.03
SFSWAP-206ENST00000537582 CCNYL1Q8N7R7 359 aa15.23■□□□□ 0.03
SFSWAP-206ENST00000537582 OR5K2Q8NHB8 316 aa15.23■□□□□ 0.03
SFSWAP-206ENST00000537582 MCOLN3Q8TDD5 553 aa15.23■□□□□ 0.03
SFSWAP-206ENST00000537582 ATG10Q9H0Y0 220 aa15.23■□□□□ 0.03
SFSWAP-206ENST00000537582 ERVMER34-1Q9H9K5 563 aa15.23■□□□□ 0.03
SFSWAP-206ENST00000537582 WASH6PQ9NQA3 447 aa15.23■□□□□ 0.03
SFSWAP-206ENST00000537582 SPASTQ9UBP0 616 aa15.23■□□□□ 0.03
SFSWAP-206ENST00000537582 MID2Q9UJV3 735 aa15.23■□□□□ 0.03
SFSWAP-206ENST00000537582 PTBP2Q9UKA9 531 aaKnown RBP15.23■□□□□ 0.03
SFSWAP-206ENST00000537582 ZFC3H1O60293 1989 aaKnown RBP15.22■□□□□ 0.03
SFSWAP-206ENST00000537582 MYO1CO00159 1063 aa15.22■□□□□ 0.03
SFSWAP-206ENST00000537582 TRIM13O60858 407 aa15.22■□□□□ 0.03
SFSWAP-206ENST00000537582 HALP42357 657 aa15.22■□□□□ 0.03
SFSWAP-206ENST00000537582 ALDH18A1P54886 795 aaKnown RBP15.22■□□□□ 0.03
SFSWAP-206ENST00000537582 GNGT1P63211 74 aa15.22■□□□□ 0.03
SFSWAP-206ENST00000537582 NFKB2Q00653 900 aa15.22■□□□□ 0.03
SFSWAP-206ENST00000537582 BST1Q10588 318 aa15.22■□□□□ 0.03
SFSWAP-206ENST00000537582 FASTKQ14296 549 aaKnown RBP15.22■□□□□ 0.03
SFSWAP-206ENST00000537582 ELOCQ15369 112 aa15.22■□□□□ 0.03
SFSWAP-206ENST00000537582 UNC50Q53HI1 259 aa15.22■□□□□ 0.03
SFSWAP-206ENST00000537582 ZNF678Q5SXM1 525 aa15.22■□□□□ 0.03
SFSWAP-206ENST00000537582 IYDQ6PHW0 289 aa15.22■□□□□ 0.03
SFSWAP-206ENST00000537582 GATAD2AQ86YP4 633 aa15.22■□□□□ 0.03
SFSWAP-206ENST00000537582 DCUN1D3Q8IWE4 304 aa15.22■□□□□ 0.03
SFSWAP-206ENST00000537582 SLC25A45Q8N413 288 aa15.22■□□□□ 0.03
SFSWAP-206ENST00000537582 OR6Y1Q8NGX8 325 aa15.22■□□□□ 0.03
SFSWAP-206ENST00000537582 SLC37A2Q8TED4 501 aa15.22■□□□□ 0.03
SFSWAP-206ENST00000537582 PYCR2Q96C36 320 aa15.22■□□□□ 0.03
SFSWAP-206ENST00000537582 TRIT1Q9H3H1 467 aaKnown RBP15.22■□□□□ 0.03
SFSWAP-206ENST00000537582 XKR8Q9H6D3 395 aa15.22■□□□□ 0.03
SFSWAP-206ENST00000537582 MANSC1Q9H8J5 431 aa15.22■□□□□ 0.03
SFSWAP-206ENST00000537582 SLCO1B3Q9NPD5 702 aa15.22■□□□□ 0.03
SFSWAP-206ENST00000537582 WWOXQ9NZC7 414 aa15.22■□□□□ 0.03
SFSWAP-206ENST00000537582 STOX2Q9P2F5 926 aaPredicted RBP15.22■□□□□ 0.03
SFSWAP-206ENST00000537582 CCDC189A1A4V9 331 aa15.21■□□□□ 0.03
SFSWAP-206ENST00000537582 TCP11X1B4DZS4 312 aa15.21■□□□□ 0.03
SFSWAP-206ENST00000537582 PPP6CO00743 305 aa15.21■□□□□ 0.03
SFSWAP-206ENST00000537582 S100BP04271 92 aaPredicted RBP15.21■□□□□ 0.03
SFSWAP-206ENST00000537582 CHRNGP07510 517 aa15.21■□□□□ 0.03
SFSWAP-206ENST00000537582 ANXA5P08758 320 aa15.21■□□□□ 0.03
SFSWAP-206ENST00000537582 HIST1H2AGP0C0S8 130 aaPredicted RBP15.21■□□□□ 0.03
SFSWAP-206ENST00000537582 GIMD1P0DJR0 217 aa15.21■□□□□ 0.03
SFSWAP-206ENST00000537582 HIST1H2ADP20671 130 aa15.21■□□□□ 0.03
SFSWAP-206ENST00000537582 IMPA1P29218 277 aa15.21■□□□□ 0.03
SFSWAP-206ENST00000537582 HOXD12P35452 270 aa15.21■□□□□ 0.03
SFSWAP-206ENST00000537582 CDH13P55290 713 aa15.21■□□□□ 0.03
SFSWAP-206ENST00000537582 MAZP56270 477 aaKnown RBP15.21■□□□□ 0.03
SFSWAP-206ENST00000537582 DNAJB13P59910 316 aa15.21■□□□□ 0.03
SFSWAP-206ENST00000537582 HERVK_113P63132 956 aa15.21■□□□□ 0.03
SFSWAP-206ENST00000537582 ZNF423Q2M1K9 1284 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms