RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 ARL4DP49703 201 aa16.66■□□□□ 0.26
SFSWAP-205ENST00000537164 DHX34Q14147 1143 aaKnown RBP16.66■□□□□ 0.26
SFSWAP-205ENST00000537164 GBX1Q14549 363 aa16.66■□□□□ 0.26
SFSWAP-205ENST00000537164 TMED2Q15363 201 aa16.66■□□□□ 0.26
SFSWAP-205ENST00000537164 PPP1R7Q15435 360 aa16.66■□□□□ 0.26
SFSWAP-205ENST00000537164 PLEKHS1Q5SXH7 462 aa16.66■□□□□ 0.26
SFSWAP-205ENST00000537164 TMTC4Q5T4D3 741 aa16.66■□□□□ 0.26
SFSWAP-205ENST00000537164 PWWP2BQ6NUJ5 590 aa16.66■□□□□ 0.26
SFSWAP-205ENST00000537164 NEPROQ6NW34 567 aa16.66■□□□□ 0.26
SFSWAP-205ENST00000537164 CASC4Q6P4E1 433 aa16.66■□□□□ 0.26
SFSWAP-205ENST00000537164 C6orf15Q6UXA7 325 aaPredicted RBP16.66■□□□□ 0.26
SFSWAP-205ENST00000537164 UNC5AQ6ZN44 842 aa16.66■□□□□ 0.26
SFSWAP-205ENST00000537164 CENPUQ71F23 418 aa16.66■□□□□ 0.26
SFSWAP-205ENST00000537164 HOOK3Q86VS8 718 aa16.66■□□□□ 0.26
SFSWAP-205ENST00000537164 LMNTD2Q8IXW0 634 aa16.66■□□□□ 0.26
SFSWAP-205ENST00000537164 FLVCR1-AS1Q8TAF5 88 aa16.66■□□□□ 0.26
SFSWAP-205ENST00000537164 TRIM56Q9BRZ2 755 aaKnown RBP16.66■□□□□ 0.26
SFSWAP-205ENST00000537164 CHRNA10Q9GZZ6 450 aa16.66■□□□□ 0.26
SFSWAP-205ENST00000537164 XKR8Q9H6D3 395 aa16.66■□□□□ 0.26
SFSWAP-205ENST00000537164 INTS10Q9NVR2 710 aaKnown RBP16.66■□□□□ 0.26
SFSWAP-205ENST00000537164 WDR70Q9NW82 654 aa16.66■□□□□ 0.26
SFSWAP-205ENST00000537164 VPS9D1Q9Y2B5 631 aa16.66■□□□□ 0.26
SFSWAP-205ENST00000537164 RPS6KL1Q9Y6S9 549 aa16.66■□□□□ 0.26
SFSWAP-205ENST00000537164 FASNP49327 2511 aaKnown RBP16.66■□□□□ 0.26
SFSWAP-205ENST00000537164 TLN1Q9Y490 2541 aaKnown RBP16.66■□□□□ 0.26
SFSWAP-205ENST00000537164 GCN1Q92616 2671 aaKnown RBP16.65■□□□□ 0.26
SFSWAP-205ENST00000537164 PIPSLA2A3N6 862 aa16.65■□□□□ 0.26
SFSWAP-205ENST00000537164 GSAPA4D1B5 854 aa16.65■□□□□ 0.26
SFSWAP-205ENST00000537164 SLC9B1P1A6NJY1 282 aa16.65■□□□□ 0.26
SFSWAP-205ENST00000537164 FANCGO15287 622 aa16.65■□□□□ 0.26
SFSWAP-205ENST00000537164 SPTBP11277 2137 aa16.65■□□□□ 0.26
SFSWAP-205ENST00000537164 ST6GAL1P15907 406 aa16.65■□□□□ 0.26
SFSWAP-205ENST00000537164 EIF3BP55884 814 aaKnown RBP16.65■□□□□ 0.26
SFSWAP-205ENST00000537164 GRB7Q14451 532 aa16.65■□□□□ 0.26
SFSWAP-205ENST00000537164 KYNUQ16719 465 aa16.65■□□□□ 0.26
SFSWAP-205ENST00000537164 FBXO38Q6PIJ6 1188 aa16.65■□□□□ 0.26
SFSWAP-205ENST00000537164 SPESP1Q6UW49 350 aa16.65■□□□□ 0.26
SFSWAP-205ENST00000537164 SYDE1Q6ZW31 735 aaPredicted RBP16.65■□□□□ 0.26
SFSWAP-205ENST00000537164 PCGF5Q86SE9 256 aa16.65■□□□□ 0.26
SFSWAP-205ENST00000537164 DCUN1D3Q8IWE4 304 aa16.65■□□□□ 0.26
SFSWAP-205ENST00000537164 KIAA1143Q96AT1 154 aaPredicted RBP16.65■□□□□ 0.26
SFSWAP-205ENST00000537164 RUNDC3BQ96NL0 473 aa16.65■□□□□ 0.26
SFSWAP-205ENST00000537164 TRAPPC9Q96Q05 1148 aa16.65■□□□□ 0.26
SFSWAP-205ENST00000537164 OR2A14Q96R47 310 aa16.65■□□□□ 0.26
SFSWAP-205ENST00000537164 GPN2Q9H9Y4 310 aaPredicted RBP16.65■□□□□ 0.26
SFSWAP-205ENST00000537164 ACTR10Q9NZ32 417 aa16.65■□□□□ 0.26
SFSWAP-205ENST00000537164 RNF14Q9UBS8 474 aa16.65■□□□□ 0.26
SFSWAP-205ENST00000537164 CTAGE9A4FU28 777 aa16.64■□□□□ 0.25
SFSWAP-205ENST00000537164 S1PR4O95977 384 aa16.64■□□□□ 0.25
SFSWAP-205ENST00000537164 CHRM5P08912 532 aaPredicted RBP16.64■□□□□ 0.25
SFSWAP-205ENST00000537164 ATP5DP30049 168 aa16.64■□□□□ 0.25
SFSWAP-205ENST00000537164 RAB28P51157 221 aa16.64■□□□□ 0.25
SFSWAP-205ENST00000537164 CSE1LP55060 971 aaKnown RBP16.64■□□□□ 0.25
SFSWAP-205ENST00000537164 KIR2DS3Q14952 304 aa16.64■□□□□ 0.25
SFSWAP-205ENST00000537164 LINC00303Q3SY05 128 aa16.64■□□□□ 0.25
SFSWAP-205ENST00000537164 TAF1BQ53T94 588 aaPredicted RBP16.64■□□□□ 0.25
SFSWAP-205ENST00000537164 OTOAQ7RTW8 1153 aa16.64■□□□□ 0.25
SFSWAP-205ENST00000537164 OTUD6BQ8N6M0 293 aa16.64■□□□□ 0.25
SFSWAP-205ENST00000537164 GALNT6Q8NCL4 622 aa16.64■□□□□ 0.25
SFSWAP-205ENST00000537164 ZNF669Q96BR6 464 aaPredicted RBP16.64■□□□□ 0.25
SFSWAP-205ENST00000537164 ELMO2Q96JJ3 720 aa16.64■□□□□ 0.25
SFSWAP-205ENST00000537164 SOHLH2Q9NX45 425 aa16.64■□□□□ 0.25
SFSWAP-205ENST00000537164 LNPEPQ9UIQ6 1025 aa16.64■□□□□ 0.25
SFSWAP-205ENST00000537164 TDRKHQ9Y2W6 561 aaKnown RBP16.64■□□□□ 0.25
SFSWAP-205ENST00000537164 PCDHGA6Q9Y5G7 932 aa16.64■□□□□ 0.25
SFSWAP-205ENST00000537164 MRFAP1Q9Y605 127 aa16.64■□□□□ 0.25
SFSWAP-205ENST00000537164 FAM169AQ9Y6X4 670 aa16.64■□□□□ 0.25
SFSWAP-205ENST00000537164 ZNF891A8MT65 544 aaPredicted RBP16.63■□□□□ 0.25
SFSWAP-205ENST00000537164 CCDC188H7C350 402 aa16.63■□□□□ 0.25
SFSWAP-205ENST00000537164 C1QL1O75973 258 aa16.63■□□□□ 0.25
SFSWAP-205ENST00000537164 RECKO95980 971 aa16.63■□□□□ 0.25
SFSWAP-205ENST00000537164 UGT2B7P16662 529 aa16.63■□□□□ 0.25
SFSWAP-205ENST00000537164 PKLRP30613 574 aa16.63■□□□□ 0.25
SFSWAP-205ENST00000537164 FMO4P31512 558 aa16.63■□□□□ 0.25
SFSWAP-205ENST00000537164 ABRQ12979 859 aa16.63■□□□□ 0.25
SFSWAP-205ENST00000537164 GPR19Q15760 415 aa16.63■□□□□ 0.25
SFSWAP-205ENST00000537164 LONRF1Q17RB8 773 aa16.63■□□□□ 0.25
SFSWAP-205ENST00000537164 SLC5A12Q1EHB4 618 aa16.63■□□□□ 0.25
SFSWAP-205ENST00000537164 ZNF789Q5FWF6 425 aa16.63■□□□□ 0.25
SFSWAP-205ENST00000537164 ZNF517Q6ZMY9 492 aaPredicted RBP16.63■□□□□ 0.25
SFSWAP-205ENST00000537164 UNC5BQ8IZJ1 945 aa16.63■□□□□ 0.25
SFSWAP-205ENST00000537164 LINC01555Q8NAE3 123 aa16.63■□□□□ 0.25
SFSWAP-205ENST00000537164 STAMBPL1Q96FJ0 436 aa16.63■□□□□ 0.25
SFSWAP-205ENST00000537164 CAPZA3Q96KX2 299 aa16.63■□□□□ 0.25
SFSWAP-205ENST00000537164 LRFN5Q96NI6 719 aa16.63■□□□□ 0.25
SFSWAP-205ENST00000537164 FAM117AQ9C073 453 aa16.63■□□□□ 0.25
SFSWAP-205ENST00000537164 LHX9Q9NQ69 397 aa16.63■□□□□ 0.25
SFSWAP-205ENST00000537164 SPHK1Q9NYA1 384 aa16.63■□□□□ 0.25
SFSWAP-205ENST00000537164 IL1RAPL1Q9NZN1 696 aa16.63■□□□□ 0.25
SFSWAP-205ENST00000537164 KLHL42Q9P2K6 505 aa16.63■□□□□ 0.25
SFSWAP-205ENST00000537164 ASIC3Q9UHC3 531 aa16.63■□□□□ 0.25
SFSWAP-205ENST00000537164 IL17BQ9UHF5 180 aa16.63■□□□□ 0.25
SFSWAP-205ENST00000537164 PADI1Q9ULC6 663 aa16.63■□□□□ 0.25
SFSWAP-205ENST00000537164 CRYL1Q9Y2S2 319 aa16.63■□□□□ 0.25
SFSWAP-205ENST00000537164 PCDHB3Q9Y5E6 796 aa16.63■□□□□ 0.25
SFSWAP-205ENST00000537164 BSNQ9UPA5 3926 aa16.63■□□□□ 0.25
SFSWAP-205ENST00000537164 SEC16AO15027 2179 aa16.62■□□□□ 0.25
SFSWAP-205ENST00000537164 HELZ2Q9BYK8 2649 aaKnown RBP16.62■□□□□ 0.25
SFSWAP-205ENST00000537164 EIF4E1BA6NMX2 242 aaKnown RBP16.62■□□□□ 0.25
SFSWAP-205ENST00000537164 SMAPO00193 183 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms