RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 CHRNA4P43681 627 aa9.03□□□□□ -0.96
CPSF7-217ENST00000537162 OR1D4P47884 311 aa9.03□□□□□ -0.96
CPSF7-217ENST00000537162 ZFP36L2P47974 494 aaKnown RBP9.03□□□□□ -0.96
CPSF7-217ENST00000537162 RENBPP51606 427 aa9.03□□□□□ -0.96
CPSF7-217ENST00000537162 DEFA6Q01524 100 aa9.03□□□□□ -0.96
CPSF7-217ENST00000537162 IL10RBQ08334 325 aa9.03□□□□□ -0.96
CPSF7-217ENST00000537162 PRKAA1Q13131 559 aa9.03□□□□□ -0.96
CPSF7-217ENST00000537162 XRCC4Q13426 336 aa9.03□□□□□ -0.96
CPSF7-217ENST00000537162 FASTKQ14296 549 aaKnown RBP9.03□□□□□ -0.96
CPSF7-217ENST00000537162 RFTN1Q14699 578 aaPredicted RBP9.03□□□□□ -0.96
CPSF7-217ENST00000537162 OR1C1Q15619 314 aa9.03□□□□□ -0.96
CPSF7-217ENST00000537162 SLC5A12Q1EHB4 618 aa9.03□□□□□ -0.96
CPSF7-217ENST00000537162 ZNF569Q5MCW4 686 aa9.03□□□□□ -0.96
CPSF7-217ENST00000537162 CATSPEREQ5SY80 951 aa9.03□□□□□ -0.96
CPSF7-217ENST00000537162 CNSTQ6PJW8 725 aa9.03□□□□□ -0.96
CPSF7-217ENST00000537162 WDR53Q7Z5U6 358 aaPredicted RBP9.03□□□□□ -0.96
CPSF7-217ENST00000537162 LAPTM4BQ86VI4 370 aa9.03□□□□□ -0.96
CPSF7-217ENST00000537162 GPR26Q8NDV2 337 aa9.03□□□□□ -0.96
CPSF7-217ENST00000537162 SPATA16Q9BXB7 569 aa9.03□□□□□ -0.96
CPSF7-217ENST00000537162 AMBRA1Q9C0C7 1298 aa9.03□□□□□ -0.96
CPSF7-217ENST00000537162 SLC6A16Q9GZN6 736 aa9.03□□□□□ -0.96
CPSF7-217ENST00000537162 ADAM19Q9H013 955 aa9.03□□□□□ -0.96
CPSF7-217ENST00000537162 WWP1Q9H0M0 922 aa9.03□□□□□ -0.96
CPSF7-217ENST00000537162 LRTM1Q9HBL6 345 aa9.03□□□□□ -0.96
CPSF7-217ENST00000537162 FANCLQ9NW38 375 aa9.03□□□□□ -0.96
CPSF7-217ENST00000537162 MKL2Q9ULH7 1088 aa9.03□□□□□ -0.96
CPSF7-217ENST00000537162 MTMR6Q9Y217 621 aa9.03□□□□□ -0.96
CPSF7-217ENST00000537162 CLCA1A8K7I4 914 aa9.02□□□□□ -0.97
CPSF7-217ENST00000537162 GPR89AB7ZAQ6 455 aa9.02□□□□□ -0.97
CPSF7-217ENST00000537162 RASGRF2O14827 1237 aa9.02□□□□□ -0.97
CPSF7-217ENST00000537162 CDC40O60508 579 aaKnown RBP eCLIP9.02□□□□□ -0.97
CPSF7-217ENST00000537162 CDK14O94921 469 aa9.02□□□□□ -0.97
CPSF7-217ENST00000537162 HRGP04196 525 aa9.02□□□□□ -0.97
CPSF7-217ENST00000537162 GPR89BP0CG08 455 aa9.02□□□□□ -0.97
CPSF7-217ENST00000537162 PNMA6AP0CW24 399 aaPredicted RBP9.02□□□□□ -0.97
CPSF7-217ENST00000537162 GLI4P10075 376 aa9.02□□□□□ -0.97
CPSF7-217ENST00000537162 RFC3P40938 356 aa9.02□□□□□ -0.97
CPSF7-217ENST00000537162 RAB28P51157 221 aa9.02□□□□□ -0.97
CPSF7-217ENST00000537162 SNX16P57768 344 aa9.02□□□□□ -0.97
CPSF7-217ENST00000537162 ATP13A4Q4VNC1 1196 aa9.02□□□□□ -0.97
CPSF7-217ENST00000537162 ARHGEF18Q6ZSZ5 1173 aa9.02□□□□□ -0.97
CPSF7-217ENST00000537162 ACAD11Q709F0 780 aa9.02□□□□□ -0.97
CPSF7-217ENST00000537162 SLFN11Q7Z7L1 901 aa9.02□□□□□ -0.97
CPSF7-217ENST00000537162 TRAPPC5Q8IUR0 188 aa9.02□□□□□ -0.97
CPSF7-217ENST00000537162 C19orf47Q8N9M1 422 aaKnown RBP9.02□□□□□ -0.97
CPSF7-217ENST00000537162 OR5M3Q8NGP4 307 aa9.02□□□□□ -0.97
CPSF7-217ENST00000537162 PPP1R14CQ8TAE6 165 aa9.02□□□□□ -0.97
CPSF7-217ENST00000537162 LINC01560Q8TB33 94 aa9.02□□□□□ -0.97
CPSF7-217ENST00000537162 FAM172AQ8WUF8 416 aa9.02□□□□□ -0.97
CPSF7-217ENST00000537162 CENPIQ92674 756 aaPredicted RBP9.02□□□□□ -0.97
CPSF7-217ENST00000537162 GLYATL1Q969I3 302 aa9.02□□□□□ -0.97
CPSF7-217ENST00000537162 NTAN1Q96AB6 310 aa9.02□□□□□ -0.97
CPSF7-217ENST00000537162 VPS50Q96JG6 964 aa9.02□□□□□ -0.97
CPSF7-217ENST00000537162 C12orf66Q96MD2 445 aa9.02□□□□□ -0.97
CPSF7-217ENST00000537162 NPAS2Q99743 824 aa9.02□□□□□ -0.97
CPSF7-217ENST00000537162 PIP5K1AQ99755 562 aa9.02□□□□□ -0.97
CPSF7-217ENST00000537162 MGME1Q9BQP7 344 aa9.02□□□□□ -0.97
CPSF7-217ENST00000537162 TTYH2Q9BSA4 534 aa9.02□□□□□ -0.97
CPSF7-217ENST00000537162 C3orf18Q9UK00 162 aa9.02□□□□□ -0.97
CPSF7-217ENST00000537162 VPS9D1Q9Y2B5 631 aa9.02□□□□□ -0.97
CPSF7-217ENST00000537162 FAM215AQ9Y5M1 114 aa9.02□□□□□ -0.97
CPSF7-217ENST00000537162 MAU2Q9Y6X3 613 aa9.02□□□□□ -0.97
CPSF7-217ENST00000537162 PRKDCP78527 4128 aaKnown RBP9.02□□□□□ -0.97
CPSF7-217ENST00000537162 SNRNP200O75643 2136 aaKnown RBP9.02□□□□□ -0.97
CPSF7-217ENST00000537162 TRRAPQ9Y4A5 3859 aa9.02□□□□□ -0.97
CPSF7-217ENST00000537162 C1orf232A0A0U1RR37 186 aa9.01□□□□□ -0.97
CPSF7-217ENST00000537162 A0A1B0GX78 115 aa9.01□□□□□ -0.97
CPSF7-217ENST00000537162 USP27XA6NNY8 438 aa9.01□□□□□ -0.97
CPSF7-217ENST00000537162 A8MUI8 341 aa9.01□□□□□ -0.97
CPSF7-217ENST00000537162 SYT5O00445 386 aa9.01□□□□□ -0.97
CPSF7-217ENST00000537162 MAP3K7O43318 606 aa9.01□□□□□ -0.97
CPSF7-217ENST00000537162 PDE9AO76083 593 aa9.01□□□□□ -0.97
CPSF7-217ENST00000537162 PRLP01236 227 aa9.01□□□□□ -0.97
CPSF7-217ENST00000537162 STATHP02808 62 aa9.01□□□□□ -0.97
CPSF7-217ENST00000537162 SP1P08047 785 aa9.01□□□□□ -0.97
CPSF7-217ENST00000537162 EPXP11678 715 aa9.01□□□□□ -0.97
CPSF7-217ENST00000537162 KRT9P35527 623 aa9.01□□□□□ -0.97
CPSF7-217ENST00000537162 TNK1Q13470 666 aa9.01□□□□□ -0.97
CPSF7-217ENST00000537162 CMPK2Q5EBM0 449 aa9.01□□□□□ -0.97
CPSF7-217ENST00000537162 UBAP2Q5T6F2 1119 aaKnown RBP9.01□□□□□ -0.97
CPSF7-217ENST00000537162 RESP18Q5W5W9 173 aa9.01□□□□□ -0.97
CPSF7-217ENST00000537162 RTL6Q6ICC9 239 aa9.01□□□□□ -0.97
CPSF7-217ENST00000537162 TLDC1Q6P9B6 456 aa9.01□□□□□ -0.97
CPSF7-217ENST00000537162 DAAM2Q86T65 1068 aa9.01□□□□□ -0.97
CPSF7-217ENST00000537162 PAQR7Q86WK9 346 aa9.01□□□□□ -0.97
CPSF7-217ENST00000537162 SHISA5Q8N114 240 aa9.01□□□□□ -0.97
CPSF7-217ENST00000537162 STT3BQ8TCJ2 826 aa9.01□□□□□ -0.97
CPSF7-217ENST00000537162 SH3GL2Q99962 352 aa9.01□□□□□ -0.97
CPSF7-217ENST00000537162 NAA15Q9BXJ9 866 aaKnown RBP9.01□□□□□ -0.97
CPSF7-217ENST00000537162 PNPLA3Q9NST1 481 aa9.01□□□□□ -0.97
CPSF7-217ENST00000537162 IRAK4Q9NWZ3 460 aa9.01□□□□□ -0.97
CPSF7-217ENST00000537162 CDC42EP3Q9UKI2 254 aa9.01□□□□□ -0.97
CPSF7-217ENST00000537162 CHKBQ9Y259 395 aa9.01□□□□□ -0.97
CPSF7-217ENST00000537162 ABCA1O95477 2261 aa9□□□□□ -0.97
CPSF7-217ENST00000537162 C2CD4BA6NLJ0 364 aa9□□□□□ -0.97
CPSF7-217ENST00000537162 EIF3CLB5ME19 914 aaKnown RBP9□□□□□ -0.97
CPSF7-217ENST00000537162 RNF223E7ERA6 249 aa9□□□□□ -0.97
CPSF7-217ENST00000537162 FGF10O15520 208 aaPredicted RBP9□□□□□ -0.97
CPSF7-217ENST00000537162 POP7O75817 140 aaKnown RBP9□□□□□ -0.97
CPSF7-217ENST00000537162 NEURL1O76050 574 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms