RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 BPIFB1Q8TDL5 484 aa13.27□□□□□ -0.28
SMG6-203ENST00000536871 SKA2Q8WVK7 121 aaPredicted RBP13.27□□□□□ -0.28
SMG6-203ENST00000536871 OR8D1Q8WZ84 308 aa13.27□□□□□ -0.28
SMG6-203ENST00000536871 ELMO1Q92556 727 aa13.27□□□□□ -0.28
SMG6-203ENST00000536871 GLYATL1Q969I3 302 aa13.27□□□□□ -0.28
SMG6-203ENST00000536871 EME1Q96AY2 570 aa13.27□□□□□ -0.28
SMG6-203ENST00000536871 CCDC97Q96F63 343 aaPredicted RBP13.27□□□□□ -0.28
SMG6-203ENST00000536871 ZSWIM3Q96MP5 696 aa13.27□□□□□ -0.28
SMG6-203ENST00000536871 FOPNLQ96NB1 174 aa13.27□□□□□ -0.28
SMG6-203ENST00000536871 KCTD14Q9BQ13 255 aaPredicted RBP13.27□□□□□ -0.28
SMG6-203ENST00000536871 C1orf50Q9BV19 199 aa13.27□□□□□ -0.28
SMG6-203ENST00000536871 FAM192AQ9GZU8 254 aa13.27□□□□□ -0.28
SMG6-203ENST00000536871 DNAJC11Q9NVH1 559 aa13.27□□□□□ -0.28
SMG6-203ENST00000536871 THG1LQ9NWX6 298 aaKnown RBP13.27□□□□□ -0.28
SMG6-203ENST00000536871 MAGEL2Q9UJ55 1249 aa13.27□□□□□ -0.28
SMG6-203ENST00000536871 MAPRE3Q9UPY8 281 aa13.27□□□□□ -0.28
SMG6-203ENST00000536871 DHRS12A0PJE2 317 aa13.27□□□□□ -0.29
SMG6-203ENST00000536871 LOC730098B7Z3J9 87 aa13.27□□□□□ -0.29
SMG6-203ENST00000536871 WNT9AO14904 365 aa13.27□□□□□ -0.29
SMG6-203ENST00000536871 ANKRD28O15084 1053 aa13.27□□□□□ -0.29
SMG6-203ENST00000536871 RNASEH2AO75792 299 aaKnown RBP13.27□□□□□ -0.29
SMG6-203ENST00000536871 KCNH1O95259 989 aa13.27□□□□□ -0.29
SMG6-203ENST00000536871 CATP04040 527 aaKnown RBP13.27□□□□□ -0.29
SMG6-203ENST00000536871 BMP2P12643 396 aa13.27□□□□□ -0.29
SMG6-203ENST00000536871 ITGB7P26010 798 aa13.27□□□□□ -0.29
SMG6-203ENST00000536871 PRLHRP49683 370 aa13.27□□□□□ -0.29
SMG6-203ENST00000536871 HTR6P50406 440 aa13.27□□□□□ -0.29
SMG6-203ENST00000536871 HNRNPFP52597 415 aaKnown RBP13.27□□□□□ -0.29
SMG6-203ENST00000536871 NTHL1P78549 312 aa13.27□□□□□ -0.29
SMG6-203ENST00000536871 FOLH1Q04609 750 aa13.27□□□□□ -0.29
SMG6-203ENST00000536871 PCDH1Q08174 1060 aa13.27□□□□□ -0.29
SMG6-203ENST00000536871 PWP1Q13610 501 aa13.27□□□□□ -0.29
SMG6-203ENST00000536871 C10orf62Q5T681 223 aaPredicted RBP13.27□□□□□ -0.29
SMG6-203ENST00000536871 LIPJQ5W064 366 aa13.27□□□□□ -0.29
SMG6-203ENST00000536871 SCIMPQ6UWF3 145 aa13.27□□□□□ -0.29
SMG6-203ENST00000536871 Q6ZVL8 140 aa13.27□□□□□ -0.29
SMG6-203ENST00000536871 ANKFN1Q8N957 763 aa13.27□□□□□ -0.29
SMG6-203ENST00000536871 B4GALNT2Q8NHY0 566 aa13.27□□□□□ -0.29
SMG6-203ENST00000536871 MIPOL1Q8TD10 442 aa13.27□□□□□ -0.29
SMG6-203ENST00000536871 CYB5D2Q8WUJ1 264 aa13.27□□□□□ -0.29
SMG6-203ENST00000536871 UCMAQ8WVF2 138 aa13.27□□□□□ -0.29
SMG6-203ENST00000536871 TMEM159Q96B96 161 aa13.27□□□□□ -0.29
SMG6-203ENST00000536871 ZNF514Q96K75 400 aaPredicted RBP13.27□□□□□ -0.29
SMG6-203ENST00000536871 CCDC138Q96M89 665 aa13.27□□□□□ -0.29
SMG6-203ENST00000536871 DPY30Q9C005 99 aa13.27□□□□□ -0.29
SMG6-203ENST00000536871 ELOVL6Q9H5J4 265 aa13.27□□□□□ -0.29
SMG6-203ENST00000536871 SFXN1Q9H9B4 322 aa13.27□□□□□ -0.29
SMG6-203ENST00000536871 DLGAP2Q9P1A6 1054 aa13.27□□□□□ -0.29
SMG6-203ENST00000536871 DEC1Q9P2X7 70 aa13.27□□□□□ -0.29
SMG6-203ENST00000536871 TMPRSS11EQ9UL52 423 aa13.27□□□□□ -0.29
SMG6-203ENST00000536871 TULP3O75386 442 aa13.26□□□□□ -0.29
SMG6-203ENST00000536871 GMNNO75496 209 aa13.26□□□□□ -0.29
SMG6-203ENST00000536871 C7P10643 843 aa13.26□□□□□ -0.29
SMG6-203ENST00000536871 G6PDP11413 515 aa13.26□□□□□ -0.29
SMG6-203ENST00000536871 GRIA3P42263 894 aa13.26□□□□□ -0.29
SMG6-203ENST00000536871 PNLIPRP1P54315 467 aa13.26□□□□□ -0.29
SMG6-203ENST00000536871 RPL38P63173 70 aaKnown RBP13.26□□□□□ -0.29
SMG6-203ENST00000536871 C18orf21Q32NC0 220 aaPredicted RBP13.26□□□□□ -0.29
SMG6-203ENST00000536871 SYTL3Q4VX76 610 aa13.26□□□□□ -0.29
SMG6-203ENST00000536871 TIGD2Q4W5G0 525 aa13.26□□□□□ -0.29
SMG6-203ENST00000536871 LRRC23Q53EV4 343 aaPredicted RBP13.26□□□□□ -0.29
SMG6-203ENST00000536871 LIPIQ6XZB0 460 aa13.26□□□□□ -0.29
SMG6-203ENST00000536871 MSANTD1Q6ZTZ1 278 aa13.26□□□□□ -0.29
SMG6-203ENST00000536871 FKBP9P1Q75LS8 142 aa13.26□□□□□ -0.29
SMG6-203ENST00000536871 ERMP1Q7Z2K6 904 aa13.26□□□□□ -0.29
SMG6-203ENST00000536871 DSG4Q86SJ6 1040 aa13.26□□□□□ -0.29
SMG6-203ENST00000536871 ETFBKMTQ8IXQ9 262 aa13.26□□□□□ -0.29
SMG6-203ENST00000536871 LILRA2Q8N149 483 aa13.26□□□□□ -0.29
SMG6-203ENST00000536871 SNX31Q8N9S9 440 aa13.26□□□□□ -0.29
SMG6-203ENST00000536871 LZICQ8WZA0 190 aa13.26□□□□□ -0.29
SMG6-203ENST00000536871 SMARCD2Q92925 531 aa13.26□□□□□ -0.29
SMG6-203ENST00000536871 SLC39A3Q9BRY0 314 aa13.26□□□□□ -0.29
SMG6-203ENST00000536871 RIOK2Q9BVS4 552 aaKnown RBP13.26□□□□□ -0.29
SMG6-203ENST00000536871 OSBPL11Q9BXB4 747 aa13.26□□□□□ -0.29
SMG6-203ENST00000536871 IL1RL2Q9HB29 575 aa13.26□□□□□ -0.29
SMG6-203ENST00000536871 DZANK1Q9NVP4 752 aa13.26□□□□□ -0.29
SMG6-203ENST00000536871 GDE1Q9NZC3 331 aa13.26□□□□□ -0.29
SMG6-203ENST00000536871 TSR3Q9UJK0 312 aaKnown RBP13.26□□□□□ -0.29
SMG6-203ENST00000536871 RNF11Q9Y3C5 154 aa13.26□□□□□ -0.29
SMG6-203ENST00000536871 POLR3HQ9Y535 204 aaPredicted RBP13.26□□□□□ -0.29
SMG6-203ENST00000536871 DPPA5A6NC42 116 aa13.25□□□□□ -0.29
SMG6-203ENST00000536871 SEC22BO75396 215 aa13.25□□□□□ -0.29
SMG6-203ENST00000536871 PSIP1O75475 530 aaKnown RBP13.25□□□□□ -0.29
SMG6-203ENST00000536871 HSD3B1P14060 373 aa13.25□□□□□ -0.29
SMG6-203ENST00000536871 HSD3B2P26439 372 aa13.25□□□□□ -0.29
SMG6-203ENST00000536871 GSK3BP49841 420 aa13.25□□□□□ -0.29
SMG6-203ENST00000536871 CHN2P52757 468 aa13.25□□□□□ -0.29
SMG6-203ENST00000536871 LIPEQ05469 1076 aa13.25□□□□□ -0.29
SMG6-203ENST00000536871 GPM6BQ13491 265 aa13.25□□□□□ -0.29
SMG6-203ENST00000536871 GRM2Q14416 872 aa13.25□□□□□ -0.29
SMG6-203ENST00000536871 ELAVL3Q14576 367 aaKnown RBP13.25□□□□□ -0.29
SMG6-203ENST00000536871 ACOX1Q15067 660 aa13.25□□□□□ -0.29
SMG6-203ENST00000536871 PDK3Q15120 406 aa13.25□□□□□ -0.29
SMG6-203ENST00000536871 HNRNPA1L2Q32P51 320 aaKnown RBP13.25□□□□□ -0.29
SMG6-203ENST00000536871 RFTN2Q52LD8 501 aaPredicted RBP13.25□□□□□ -0.29
SMG6-203ENST00000536871 PAGE3Q5JUK9 113 aa13.25□□□□□ -0.29
SMG6-203ENST00000536871 NANOGP8Q6NSW7 305 aa13.25□□□□□ -0.29
SMG6-203ENST00000536871 DCBLD1Q8N8Z6 715 aa13.25□□□□□ -0.29
SMG6-203ENST00000536871 FBXO15Q8NCQ5 510 aaPredicted RBP13.25□□□□□ -0.29
SMG6-203ENST00000536871 SLC13A3Q8WWT9 602 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms