RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 ELMO1Q92556 727 aa19.03■□□□□ 0.64
TNFRSF1B-204ENST00000536782 TCTN2Q96GX1 697 aa19.03■□□□□ 0.64
TNFRSF1B-204ENST00000536782 DHRS4Q9BTZ2 278 aa19.03■□□□□ 0.64
TNFRSF1B-204ENST00000536782 LRRC4CQ9HCJ2 640 aa19.03■□□□□ 0.64
TNFRSF1B-204ENST00000536782 POLG2Q9UHN1 485 aa19.03■□□□□ 0.64
TNFRSF1B-204ENST00000536782 MAP4K5Q9Y4K4 846 aa19.03■□□□□ 0.64
TNFRSF1B-204ENST00000536782 PRSS21Q9Y6M0 314 aa19.03■□□□□ 0.64
TNFRSF1B-204ENST00000536782 CCDC78A2IDD5 438 aa19.02■□□□□ 0.64
TNFRSF1B-204ENST00000536782 MROH6A6NGR9 719 aa19.02■□□□□ 0.64
TNFRSF1B-204ENST00000536782 MIF4GDA9UHW6 222 aaKnown RBP19.02■□□□□ 0.64
TNFRSF1B-204ENST00000536782 UGT2B7P16662 529 aa19.02■□□□□ 0.64
TNFRSF1B-204ENST00000536782 PSMA3P25788 255 aa19.02■□□□□ 0.64
TNFRSF1B-204ENST00000536782 ZNF75DP51815 510 aa19.02■□□□□ 0.64
TNFRSF1B-204ENST00000536782 GDF10P55107 478 aa19.02■□□□□ 0.64
TNFRSF1B-204ENST00000536782 BRD3Q15059 726 aa19.02■□□□□ 0.64
TNFRSF1B-204ENST00000536782 ZNF385CQ66K41 422 aaPredicted RBP19.02■□□□□ 0.64
TNFRSF1B-204ENST00000536782 PACS1Q6VY07 963 aa19.02■□□□□ 0.64
TNFRSF1B-204ENST00000536782 LINC00523Q86TU6 105 aa19.02■□□□□ 0.64
TNFRSF1B-204ENST00000536782 TRIM73Q86UV7 250 aa19.02■□□□□ 0.64
TNFRSF1B-204ENST00000536782 TBC1D21Q8IYX1 336 aa19.02■□□□□ 0.64
TNFRSF1B-204ENST00000536782 SYCE1Q8N0S2 351 aa19.02■□□□□ 0.64
TNFRSF1B-204ENST00000536782 GLIS1Q8NBF1 620 aa19.02■□□□□ 0.64
TNFRSF1B-204ENST00000536782 ACRBPQ8NEB7 543 aa19.02■□□□□ 0.64
TNFRSF1B-204ENST00000536782 MRFAP1L1Q96HT8 127 aa19.02■□□□□ 0.64
TNFRSF1B-204ENST00000536782 OR2A14Q96R47 310 aa19.02■□□□□ 0.64
TNFRSF1B-204ENST00000536782 C17orf62Q9BQA9 187 aa19.02■□□□□ 0.64
TNFRSF1B-204ENST00000536782 TMEM121Q9BTD3 319 aa19.02■□□□□ 0.64
TNFRSF1B-204ENST00000536782 NUDT9Q9BW91 350 aa19.02■□□□□ 0.64
TNFRSF1B-204ENST00000536782 RBSNQ9H1K0 784 aa19.02■□□□□ 0.64
TNFRSF1B-204ENST00000536782 FAM60AQ9NP50 221 aa19.02■□□□□ 0.64
TNFRSF1B-204ENST00000536782 AP1M2Q9Y6Q5 423 aa19.02■□□□□ 0.64
TNFRSF1B-204ENST00000536782 SNRNP200O75643 2136 aaKnown RBP19.01■□□□□ 0.63
TNFRSF1B-204ENST00000536782 A6NL46 340 aa19.01■□□□□ 0.63
TNFRSF1B-204ENST00000536782 OR2B3O76000 313 aa19.01■□□□□ 0.63
TNFRSF1B-204ENST00000536782 CHRM5P08912 532 aaPredicted RBP19.01■□□□□ 0.63
TNFRSF1B-204ENST00000536782 ACADLP28330 430 aa19.01■□□□□ 0.63
TNFRSF1B-204ENST00000536782 PLOD1Q02809 727 aaPredicted RBP19.01■□□□□ 0.63
TNFRSF1B-204ENST00000536782 KLF1Q13351 362 aaPredicted RBP19.01■□□□□ 0.63
TNFRSF1B-204ENST00000536782 ATP1A4Q13733 1029 aa19.01■□□□□ 0.63
TNFRSF1B-204ENST00000536782 SYTL3Q4VX76 610 aa19.01■□□□□ 0.63
TNFRSF1B-204ENST00000536782 FHL5Q5TD97 284 aa19.01■□□□□ 0.63
TNFRSF1B-204ENST00000536782 JMJD6Q6NYC1 403 aaPredicted RBP19.01■□□□□ 0.63
TNFRSF1B-204ENST00000536782 KIAA1328Q86T90 577 aa19.01■□□□□ 0.63
TNFRSF1B-204ENST00000536782 TAB3Q8N5C8 712 aaPredicted RBP19.01■□□□□ 0.63
TNFRSF1B-204ENST00000536782 SLC35B2Q8TB61 432 aa19.01■□□□□ 0.63
TNFRSF1B-204ENST00000536782 SGSM3Q96HU1 749 aa19.01■□□□□ 0.63
TNFRSF1B-204ENST00000536782 CHRNA10Q9GZZ6 450 aa19.01■□□□□ 0.63
TNFRSF1B-204ENST00000536782 GPR83Q9NYM4 423 aa19.01■□□□□ 0.63
TNFRSF1B-204ENST00000536782 OR6C2Q9NZP2 312 aa19.01■□□□□ 0.63
TNFRSF1B-204ENST00000536782 PACSIN2Q9UNF0 486 aaPredicted RBP19.01■□□□□ 0.63
TNFRSF1B-204ENST00000536782 TDRKHQ9Y2W6 561 aaKnown RBP19.01■□□□□ 0.63
TNFRSF1B-204ENST00000536782 PCSK5Q92824 1860 aa19.01■□□□□ 0.63
TNFRSF1B-204ENST00000536782 ANKRD12Q6UB98 2062 aa19.01■□□□□ 0.63
TNFRSF1B-204ENST00000536782 OR51F1A6NGY5 319 aa19■□□□□ 0.63
TNFRSF1B-204ENST00000536782 KDM1AO60341 852 aa19■□□□□ 0.63
TNFRSF1B-204ENST00000536782 AGFG2O95081 481 aa19■□□□□ 0.63
TNFRSF1B-204ENST00000536782 OR56A5P0C7T3 313 aa19■□□□□ 0.63
TNFRSF1B-204ENST00000536782 CBSLP0DN79 551 aa19■□□□□ 0.63
TNFRSF1B-204ENST00000536782 FOXN2P32314 431 aa19■□□□□ 0.63
TNFRSF1B-204ENST00000536782 CBSP35520 551 aa19■□□□□ 0.63
TNFRSF1B-204ENST00000536782 INPP5JQ15735 1006 aaPredicted RBP19■□□□□ 0.63
TNFRSF1B-204ENST00000536782 ZIC1Q15915 447 aa19■□□□□ 0.63
TNFRSF1B-204ENST00000536782 DEFB110Q30KQ9 67 aa19■□□□□ 0.63
TNFRSF1B-204ENST00000536782 MLIPQ5VWP3 458 aa19■□□□□ 0.63
TNFRSF1B-204ENST00000536782 RHBDD2Q6NTF9 364 aa19■□□□□ 0.63
TNFRSF1B-204ENST00000536782 OR5K2Q8NHB8 316 aa19■□□□□ 0.63
TNFRSF1B-204ENST00000536782 IP6K3Q96PC2 410 aa19■□□□□ 0.63
TNFRSF1B-204ENST00000536782 MFRPQ9BY79 579 aa19■□□□□ 0.63
TNFRSF1B-204ENST00000536782 SPRTNQ9H040 489 aaPredicted RBP19■□□□□ 0.63
TNFRSF1B-204ENST00000536782 SLAMF7Q9NQ25 335 aa19■□□□□ 0.63
TNFRSF1B-204ENST00000536782 SPHK1Q9NYA1 384 aa19■□□□□ 0.63
TNFRSF1B-204ENST00000536782 GPN3Q9UHW5 284 aaPredicted RBP19■□□□□ 0.63
TNFRSF1B-204ENST00000536782 R3HDM2Q9Y2K5 976 aaKnown RBP19■□□□□ 0.63
TNFRSF1B-204ENST00000536782 CACNA1DQ01668 2161 aa19■□□□□ 0.63
TNFRSF1B-204ENST00000536782 A0A0J9YY10 115 aa18.99■□□□□ 0.63
TNFRSF1B-204ENST00000536782 SLC5A10A0PJK1 596 aa18.99■□□□□ 0.63
TNFRSF1B-204ENST00000536782 CCDC162PA2VCL2 907 aa18.99■□□□□ 0.63
TNFRSF1B-204ENST00000536782 BHMG1C9JSJ3 638 aaPredicted RBP18.99■□□□□ 0.63
TNFRSF1B-204ENST00000536782 H3BMH7 237 aa18.99■□□□□ 0.63
TNFRSF1B-204ENST00000536782 KLF7O75840 302 aaPredicted RBP18.99■□□□□ 0.63
TNFRSF1B-204ENST00000536782 GAS8O95995 478 aa18.99■□□□□ 0.63
TNFRSF1B-204ENST00000536782 CD63P08962 238 aa18.99■□□□□ 0.63
TNFRSF1B-204ENST00000536782 TPBGLP0DKB5 382 aa18.99■□□□□ 0.63
TNFRSF1B-204ENST00000536782 OTX2P32243 289 aa18.99■□□□□ 0.63
TNFRSF1B-204ENST00000536782 GABRA4P48169 554 aa18.99■□□□□ 0.63
TNFRSF1B-204ENST00000536782 CDH17Q12864 832 aa18.99■□□□□ 0.63
TNFRSF1B-204ENST00000536782 SSPNQ14714 243 aa18.99■□□□□ 0.63
TNFRSF1B-204ENST00000536782 CCDC38Q502W7 563 aa18.99■□□□□ 0.63
TNFRSF1B-204ENST00000536782 LYPLAL1Q5VWZ2 237 aa18.99■□□□□ 0.63
TNFRSF1B-204ENST00000536782 NAPRTQ6XQN6 538 aa18.99■□□□□ 0.63
TNFRSF1B-204ENST00000536782 DNAAF3Q8N9W5 541 aa18.99■□□□□ 0.63
TNFRSF1B-204ENST00000536782 OR52K1Q8NGK4 314 aa18.99■□□□□ 0.63
TNFRSF1B-204ENST00000536782 FLVCR1-AS1Q8TAF5 88 aa18.99■□□□□ 0.63
TNFRSF1B-204ENST00000536782 PROKR1Q8TCW9 393 aa18.99■□□□□ 0.63
TNFRSF1B-204ENST00000536782 TTC1Q99614 292 aa18.99■□□□□ 0.63
TNFRSF1B-204ENST00000536782 SMAD5Q99717 465 aaKnown RBP18.99■□□□□ 0.63
TNFRSF1B-204ENST00000536782 LUZP4Q9P127 313 aa18.99■□□□□ 0.63
TNFRSF1B-204ENST00000536782 ERI2A8K979 691 aaKnown RBP18.98■□□□□ 0.63
TNFRSF1B-204ENST00000536782 F8W8V4 182 aa18.98■□□□□ 0.63
TNFRSF1B-204ENST00000536782 HCRTR1O43613 425 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms