RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 HGH1Q9BTY7 390 aa17.35■□□□□ 0.37
TNFRSF1A-209ENST00000536717 SLC12A9Q9BXP2 914 aa17.35■□□□□ 0.37
TNFRSF1A-209ENST00000536717 ULBP3Q9BZM4 244 aa17.35■□□□□ 0.37
TNFRSF1A-209ENST00000536717 SEMA4CQ9C0C4 833 aa17.35■□□□□ 0.37
TNFRSF1A-209ENST00000536717 SRMSQ9H3Y6 488 aa17.35■□□□□ 0.37
TNFRSF1A-209ENST00000536717 TFB2MQ9H5Q4 396 aaKnown RBP17.35■□□□□ 0.37
TNFRSF1A-209ENST00000536717 POMT2Q9UKY4 750 aa17.35■□□□□ 0.37
TNFRSF1A-209ENST00000536717 PCM1Q15154 2024 aa17.35■□□□□ 0.37
TNFRSF1A-209ENST00000536717 BAHCC1Q9P281 2608 aa17.34■□□□□ 0.37
TNFRSF1A-209ENST00000536717 TLN1Q9Y490 2541 aaKnown RBP17.34■□□□□ 0.37
TNFRSF1A-209ENST00000536717 FAM237BA0A1B0GVD1 139 aa17.34■□□□□ 0.37
TNFRSF1A-209ENST00000536717 CD3EAPO15446 510 aaKnown RBP17.34■□□□□ 0.37
TNFRSF1A-209ENST00000536717 EBLN1P0CF75 366 aa17.34■□□□□ 0.37
TNFRSF1A-209ENST00000536717 ITGB6P18564 788 aa17.34■□□□□ 0.37
TNFRSF1A-209ENST00000536717 ARNTP27540 789 aa17.34■□□□□ 0.37
TNFRSF1A-209ENST00000536717 ABHD18Q0P651 414 aa17.34■□□□□ 0.37
TNFRSF1A-209ENST00000536717 PDIA2Q13087 525 aaKnown RBP17.34■□□□□ 0.37
TNFRSF1A-209ENST00000536717 PRKG2Q13237 762 aa17.34■□□□□ 0.37
TNFRSF1A-209ENST00000536717 LY6DQ14210 128 aa17.34■□□□□ 0.37
TNFRSF1A-209ENST00000536717 MAP7Q14244 749 aa17.34■□□□□ 0.37
TNFRSF1A-209ENST00000536717 ARMC6Q6NXE6 501 aa17.34■□□□□ 0.37
TNFRSF1A-209ENST00000536717 PPP1R3BQ86XI6 285 aa17.34■□□□□ 0.37
TNFRSF1A-209ENST00000536717 RASGRP3Q8IV61 690 aa17.34■□□□□ 0.37
TNFRSF1A-209ENST00000536717 UNC5BQ8IZJ1 945 aa17.34■□□□□ 0.37
TNFRSF1A-209ENST00000536717 D2HGDHQ8N465 521 aa17.34■□□□□ 0.37
TNFRSF1A-209ENST00000536717 ZSCAN1Q8NBB4 408 aa17.34■□□□□ 0.37
TNFRSF1A-209ENST00000536717 OR5AR1Q8NGP9 310 aa17.34■□□□□ 0.37
TNFRSF1A-209ENST00000536717 EBNA1BP2Q99848 306 aaKnown RBP17.34■□□□□ 0.37
TNFRSF1A-209ENST00000536717 PHACTR1Q9C0D0 580 aa17.34■□□□□ 0.37
TNFRSF1A-209ENST00000536717 TRIT1Q9H3H1 467 aaKnown RBP17.34■□□□□ 0.37
TNFRSF1A-209ENST00000536717 RRAGDQ9NQL2 400 aaPredicted RBP17.34■□□□□ 0.37
TNFRSF1A-209ENST00000536717 ZDHHC18Q9NUE0 388 aa17.34■□□□□ 0.37
TNFRSF1A-209ENST00000536717 RPS6KL1Q9Y6S9 549 aa17.34■□□□□ 0.37
TNFRSF1A-209ENST00000536717 IQCF5A8MTL0 148 aa17.33■□□□□ 0.37
TNFRSF1A-209ENST00000536717 E7ESA3 106 aa17.33■□□□□ 0.37
TNFRSF1A-209ENST00000536717 BTN3A1O00481 513 aa17.33■□□□□ 0.37
TNFRSF1A-209ENST00000536717 EIF3HO15372 352 aaKnown RBP eCLIP17.33■□□□□ 0.37
TNFRSF1A-209ENST00000536717 BANF1O75531 89 aa17.33■□□□□ 0.37
TNFRSF1A-209ENST00000536717 SPAG6O75602 509 aa17.33■□□□□ 0.37
TNFRSF1A-209ENST00000536717 KIAA0754O94854 1291 aa17.33■□□□□ 0.37
TNFRSF1A-209ENST00000536717 TIAF1O95411 115 aa17.33■□□□□ 0.37
TNFRSF1A-209ENST00000536717 PGAM1P18669 254 aa17.33■□□□□ 0.37
TNFRSF1A-209ENST00000536717 PAMP19021 973 aa17.33■□□□□ 0.37
TNFRSF1A-209ENST00000536717 CCR7P32248 378 aa17.33■□□□□ 0.37
TNFRSF1A-209ENST00000536717 PPARGP37231 505 aaPredicted RBP17.33■□□□□ 0.37
TNFRSF1A-209ENST00000536717 ELK3P41970 407 aa17.33■□□□□ 0.37
TNFRSF1A-209ENST00000536717 HSD11B2P80365 405 aa17.33■□□□□ 0.37
TNFRSF1A-209ENST00000536717 PRKAA1Q13131 559 aa17.33■□□□□ 0.37
TNFRSF1A-209ENST00000536717 TUBB3Q13509 450 aa17.33■□□□□ 0.37
TNFRSF1A-209ENST00000536717 LINC00303Q3SY05 128 aa17.33■□□□□ 0.37
TNFRSF1A-209ENST00000536717 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.33■□□□□ 0.37
TNFRSF1A-209ENST00000536717 AARS2Q5JTZ9 985 aaKnown RBP17.33■□□□□ 0.37
TNFRSF1A-209ENST00000536717 CES3Q6UWW8 571 aa17.33■□□□□ 0.37
TNFRSF1A-209ENST00000536717 CEP128Q6ZU80 1094 aa17.33■□□□□ 0.37
TNFRSF1A-209ENST00000536717 CARFQ8N187 725 aa17.33■□□□□ 0.37
TNFRSF1A-209ENST00000536717 AGGF1Q8N302 714 aaeCLIP17.33■□□□□ 0.37
TNFRSF1A-209ENST00000536717 ESX1Q8N693 406 aa17.33■□□□□ 0.37
TNFRSF1A-209ENST00000536717 TSPYL1Q9H0U9 437 aa17.33■□□□□ 0.37
TNFRSF1A-209ENST00000536717 CDYLQ9Y232 598 aa17.33■□□□□ 0.37
TNFRSF1A-209ENST00000536717 ASF1AQ9Y294 204 aa17.33■□□□□ 0.37
TNFRSF1A-209ENST00000536717 BTRCQ9Y297 605 aa17.33■□□□□ 0.37
TNFRSF1A-209ENST00000536717 CCDC88CQ9P219 2028 aa17.33■□□□□ 0.36
TNFRSF1A-209ENST00000536717 MATN2O00339 956 aa17.32■□□□□ 0.36
TNFRSF1A-209ENST00000536717 PRMT5O14744 637 aaPredicted RBP17.32■□□□□ 0.36
TNFRSF1A-209ENST00000536717 USP1O94782 785 aa17.32■□□□□ 0.36
TNFRSF1A-209ENST00000536717 ZBTB11O95625 1053 aaPredicted RBP17.32■□□□□ 0.36
TNFRSF1A-209ENST00000536717 TTC4O95801 387 aa17.32■□□□□ 0.36
TNFRSF1A-209ENST00000536717 ITGB2P05107 769 aa17.32■□□□□ 0.36
TNFRSF1A-209ENST00000536717 PRDX3P30048 256 aaKnown RBP17.32■□□□□ 0.36
TNFRSF1A-209ENST00000536717 STAT5AP42229 794 aa17.32■□□□□ 0.36
TNFRSF1A-209ENST00000536717 CARSP49589 748 aaKnown RBP17.32■□□□□ 0.36
TNFRSF1A-209ENST00000536717 TTPAP49638 278 aa17.32■□□□□ 0.36
TNFRSF1A-209ENST00000536717 CSE1LP55060 971 aaKnown RBP17.32■□□□□ 0.36
TNFRSF1A-209ENST00000536717 PLOD1Q02809 727 aaPredicted RBP17.32■□□□□ 0.36
TNFRSF1A-209ENST00000536717 CBLBQ13191 982 aa17.32■□□□□ 0.36
TNFRSF1A-209ENST00000536717 COL9A2Q14055 689 aaPredicted RBP17.32■□□□□ 0.36
TNFRSF1A-209ENST00000536717 HP1BP3Q5SSJ5 553 aaPredicted RBP17.32■□□□□ 0.36
TNFRSF1A-209ENST00000536717 TMEM135Q86UB9 458 aa17.32■□□□□ 0.36
TNFRSF1A-209ENST00000536717 AMIGO1Q86WK6 493 aa17.32■□□□□ 0.36
TNFRSF1A-209ENST00000536717 CCDC25Q86WR0 208 aa17.32■□□□□ 0.36
TNFRSF1A-209ENST00000536717 VRK3Q8IV63 474 aa17.32■□□□□ 0.36
TNFRSF1A-209ENST00000536717 ZBED8Q8IZ13 594 aa17.32■□□□□ 0.36
TNFRSF1A-209ENST00000536717 ADGRF3Q8IZF5 1079 aa17.32■□□□□ 0.36
TNFRSF1A-209ENST00000536717 GALNT6Q8NCL4 622 aa17.32■□□□□ 0.36
TNFRSF1A-209ENST00000536717 EXTL1Q92935 676 aa17.32■□□□□ 0.36
TNFRSF1A-209ENST00000536717 ZNF669Q96BR6 464 aaPredicted RBP17.32■□□□□ 0.36
TNFRSF1A-209ENST00000536717 SLC45A3Q96JT2 553 aa17.32■□□□□ 0.36
TNFRSF1A-209ENST00000536717 FMO2Q99518 471 aa17.32■□□□□ 0.36
TNFRSF1A-209ENST00000536717 P2RY12Q9H244 342 aa17.32■□□□□ 0.36
TNFRSF1A-209ENST00000536717 XKR8Q9H6D3 395 aa17.32■□□□□ 0.36
TNFRSF1A-209ENST00000536717 GPN2Q9H9Y4 310 aaPredicted RBP17.32■□□□□ 0.36
TNFRSF1A-209ENST00000536717 PDE7BQ9NP56 450 aa17.32■□□□□ 0.36
TNFRSF1A-209ENST00000536717 SAYSD1Q9NPB0 183 aa17.32■□□□□ 0.36
TNFRSF1A-209ENST00000536717 C1GALT1Q9NS00 363 aa17.32■□□□□ 0.36
TNFRSF1A-209ENST00000536717 FGF21Q9NSA1 209 aa17.32■□□□□ 0.36
TNFRSF1A-209ENST00000536717 ZC3H7BQ9UGR2 993 aaKnown RBP17.32■□□□□ 0.36
TNFRSF1A-209ENST00000536717 IL17BQ9UHF5 180 aa17.32■□□□□ 0.36
TNFRSF1A-209ENST00000536717 RARRES3Q9UL19 164 aa17.32■□□□□ 0.36
TNFRSF1A-209ENST00000536717 ICKQ9UPZ9 632 aa17.32■□□□□ 0.36
TNFRSF1A-209ENST00000536717 CHMP2BQ9UQN3 213 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms