RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-208	ENST00000536710	PDX1	P52945	283 aa		5.09	□□□□□ -1.59
PRKDC-208	ENST00000536710	DVL1P1	P54792	670 aa	Predicted RBP	5.09	□□□□□ -1.59
PRKDC-208	ENST00000536710	UBASH3A	P57075	661 aa		5.09	□□□□□ -1.59
PRKDC-208	ENST00000536710	CX3CL1	P78423	397 aa		5.09	□□□□□ -1.59
PRKDC-208	ENST00000536710	CUL3	Q13618	768 aa		5.09	□□□□□ -1.59
PRKDC-208	ENST00000536710	NFE2L1	Q14494	772 aa		5.09	□□□□□ -1.59
PRKDC-208	ENST00000536710	E2F5	Q15329	346 aa		5.09	□□□□□ -1.59
PRKDC-208	ENST00000536710	SYT14P1	Q58G82	188 aa		5.09	□□□□□ -1.59
PRKDC-208	ENST00000536710	NHSL2	Q5HYW2	709 aa		5.09	□□□□□ -1.59
PRKDC-208	ENST00000536710	ELFN2	Q5R3F8	820 aa		5.09	□□□□□ -1.59
PRKDC-208	ENST00000536710	SHE	Q5VZ18	495 aa		5.09	□□□□□ -1.59
PRKDC-208	ENST00000536710	C11orf88	Q6PI97	169 aa		5.09	□□□□□ -1.59
PRKDC-208	ENST00000536710	ENPP7	Q6UWV6	458 aa		5.09	□□□□□ -1.59
PRKDC-208	ENST00000536710	MSANTD1	Q6ZTZ1	278 aa		5.09	□□□□□ -1.59
PRKDC-208	ENST00000536710	C16orf82	Q7Z2V1	217 aa		5.09	□□□□□ -1.59
PRKDC-208	ENST00000536710	DZIP1	Q86YF9	867 aa	Known RBP	5.09	□□□□□ -1.59
PRKDC-208	ENST00000536710	GPALPP1	Q8IXQ4	340 aa		5.09	□□□□□ -1.59
PRKDC-208	ENST00000536710	CCDC170	Q8IYT3	715 aa		5.09	□□□□□ -1.59
PRKDC-208	ENST00000536710	VN1R1	Q9GZP7	353 aa		5.09	□□□□□ -1.59
PRKDC-208	ENST00000536710	EBF2	Q9HAK2	575 aa		5.09	□□□□□ -1.59
PRKDC-208	ENST00000536710	CDH20	Q9HBT6	801 aa		5.09	□□□□□ -1.59
PRKDC-208	ENST00000536710	APOBEC3G	Q9HC16	384 aa	Known RBP	5.09	□□□□□ -1.59
PRKDC-208	ENST00000536710	COQ3	Q9NZJ6	369 aa		5.09	□□□□□ -1.59
PRKDC-208	ENST00000536710	ARMCX3	Q9UH62	379 aa	Predicted RBP	5.09	□□□□□ -1.59
PRKDC-208	ENST00000536710	PRR32	B1ATL7	298 aa		5.08	□□□□□ -1.6
PRKDC-208	ENST00000536710	FAM86B1	E9PN63	330 aa		5.08	□□□□□ -1.6
PRKDC-208	ENST00000536710	OVOL3	O00110	214 aa		5.08	□□□□□ -1.6
PRKDC-208	ENST00000536710	GAPDHS	O14556	408 aa	Predicted RBP	5.08	□□□□□ -1.6
PRKDC-208	ENST00000536710	SMAD6	O43541	496 aa	Known RBP	5.08	□□□□□ -1.6
PRKDC-208	ENST00000536710	SYNGR3	O43761	229 aa		5.08	□□□□□ -1.6
PRKDC-208	ENST00000536710	SLC28A2	O43868	658 aa		5.08	□□□□□ -1.6
PRKDC-208	ENST00000536710	WDPCP	O95876	746 aa		5.08	□□□□□ -1.6
PRKDC-208	ENST00000536710	FAM86B2	P0C5J1	330 aa		5.08	□□□□□ -1.6
PRKDC-208	ENST00000536710	SUPT20HL2	P0C7V6	817 aa		5.08	□□□□□ -1.6
PRKDC-208	ENST00000536710	SAG	P10523	405 aa	Predicted RBP	5.08	□□□□□ -1.6
PRKDC-208	ENST00000536710	MYL6B	P14649	208 aa		5.08	□□□□□ -1.6
PRKDC-208	ENST00000536710	JAK1	P23458	1154 aa		5.08	□□□□□ -1.6
PRKDC-208	ENST00000536710	EPHA2	P29317	976 aa		5.08	□□□□□ -1.6
PRKDC-208	ENST00000536710	OAS2	P29728	719 aa	Known RBP	5.08	□□□□□ -1.6
PRKDC-208	ENST00000536710	SLC6A6	P31641	620 aa		5.08	□□□□□ -1.6
PRKDC-208	ENST00000536710	ZNF132	P52740	706 aa		5.08	□□□□□ -1.6
PRKDC-208	ENST00000536710	THOP1	P52888	689 aa		5.08	□□□□□ -1.6
PRKDC-208	ENST00000536710	RPL24	P83731	157 aa	Known RBP	5.08	□□□□□ -1.6
PRKDC-208	ENST00000536710	ZXDB	P98169	803 aa		5.08	□□□□□ -1.6
PRKDC-208	ENST00000536710	YWHAH	Q04917	246 aa	Predicted RBP	5.08	□□□□□ -1.6
PRKDC-208	ENST00000536710	VEZF1	Q14119	521 aa		5.08	□□□□□ -1.6
PRKDC-208	ENST00000536710	LRRC73	Q5JTD7	316 aa		5.08	□□□□□ -1.6
PRKDC-208	ENST00000536710	C11orf63	Q6NUN7	778 aa		5.08	□□□□□ -1.6
PRKDC-208	ENST00000536710	CORO6	Q6QEF8	472 aa		5.08	□□□□□ -1.6
PRKDC-208	ENST00000536710	ARMC9	Q7Z3E5	817 aa		5.08	□□□□□ -1.6
PRKDC-208	ENST00000536710	NUP93	Q8N1F7	819 aa		5.08	□□□□□ -1.6
PRKDC-208	ENST00000536710	TRIML1	Q8N9V2	468 aa		5.08	□□□□□ -1.6
PRKDC-208	ENST00000536710	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	5.08	□□□□□ -1.6
PRKDC-208	ENST00000536710	OR13J1	Q8NGT2	312 aa		5.08	□□□□□ -1.6
PRKDC-208	ENST00000536710	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	5.08	□□□□□ -1.6
PRKDC-208	ENST00000536710	NSMAF	Q92636	917 aa		5.08	□□□□□ -1.6
PRKDC-208	ENST00000536710	CORO2A	Q92828	525 aa		5.08	□□□□□ -1.6
PRKDC-208	ENST00000536710	DHX58	Q96C10	678 aa		5.08	□□□□□ -1.6
PRKDC-208	ENST00000536710	ERO1A	Q96HE7	468 aa		5.08	□□□□□ -1.6
PRKDC-208	ENST00000536710	LYZL4	Q96KX0	146 aa		5.08	□□□□□ -1.6
PRKDC-208	ENST00000536710	ZNF583	Q96ND8	569 aa		5.08	□□□□□ -1.6
PRKDC-208	ENST00000536710	DUX5	Q96PT3	197 aa		5.08	□□□□□ -1.6
PRKDC-208	ENST00000536710	INPP5K	Q9BT40	448 aa		5.08	□□□□□ -1.6
PRKDC-208	ENST00000536710	C1QTNF4	Q9BXJ3	329 aa		5.08	□□□□□ -1.6
PRKDC-208	ENST00000536710	PRRG4	Q9BZD6	226 aa		5.08	□□□□□ -1.6
PRKDC-208	ENST00000536710	S1PR5	Q9H228	398 aa		5.08	□□□□□ -1.6
PRKDC-208	ENST00000536710	HIPK2	Q9H2X6	1198 aa		5.08	□□□□□ -1.6
PRKDC-208	ENST00000536710	KLHL1	Q9NR64	748 aa		5.08	□□□□□ -1.6
PRKDC-208	ENST00000536710	GKN1	Q9NS71	199 aa		5.08	□□□□□ -1.6
PRKDC-208	ENST00000536710	FAF1	Q9UNN5	650 aa	Predicted RBP	5.08	□□□□□ -1.6
PRKDC-208	ENST00000536710	JRKL	Q9Y4A0	524 aa		5.08	□□□□□ -1.6
PRKDC-208	ENST00000536710	PCDHGB1	Q9Y5G3	927 aa		5.08	□□□□□ -1.6
PRKDC-208	ENST00000536710		A0A087WV48	116 aa		5.07	□□□□□ -1.6
PRKDC-208	ENST00000536710		A0A0U1RQK1	487 aa		5.07	□□□□□ -1.6
PRKDC-208	ENST00000536710	ZNF320	A2RRD8	509 aa		5.07	□□□□□ -1.6
PRKDC-208	ENST00000536710		E9PI62	339 aa		5.07	□□□□□ -1.6
PRKDC-208	ENST00000536710	STX6	O43752	255 aa		5.07	□□□□□ -1.6
PRKDC-208	ENST00000536710	BAG4	O95429	457 aa	Known RBP	5.07	□□□□□ -1.6
PRKDC-208	ENST00000536710	NTN1	O95631	604 aa		5.07	□□□□□ -1.6
PRKDC-208	ENST00000536710	ZFY	P08048	801 aa	Predicted RBP	5.07	□□□□□ -1.6
PRKDC-208	ENST00000536710	PLA2G4B	P0C869	781 aa		5.07	□□□□□ -1.6
PRKDC-208	ENST00000536710	PLA2G2A	P14555	144 aa		5.07	□□□□□ -1.6
PRKDC-208	ENST00000536710	ADRA2C	P18825	462 aa		5.07	□□□□□ -1.6
PRKDC-208	ENST00000536710	GNAZ	P19086	355 aa		5.07	□□□□□ -1.6
PRKDC-208	ENST00000536710	CAST	P20810	708 aa	Known RBP	5.07	□□□□□ -1.6
PRKDC-208	ENST00000536710	KRT2	P35908	639 aa		5.07	□□□□□ -1.6
PRKDC-208	ENST00000536710	MNDA	P41218	407 aa		5.07	□□□□□ -1.6
PRKDC-208	ENST00000536710	NANOS2	P60321	138 aa	Known RBP	5.07	□□□□□ -1.6
PRKDC-208	ENST00000536710	RRS1	Q15050	365 aa	Known RBP	5.07	□□□□□ -1.6
PRKDC-208	ENST00000536710	MCMDC2	Q4G0Z9	681 aa		5.07	□□□□□ -1.6
PRKDC-208	ENST00000536710	ZRANB3	Q5FWF4	1079 aa		5.07	□□□□□ -1.6
PRKDC-208	ENST00000536710	C9orf57	Q5W0N0	161 aa		5.07	□□□□□ -1.6
PRKDC-208	ENST00000536710	DSG4	Q86SJ6	1040 aa		5.07	□□□□□ -1.6
PRKDC-208	ENST00000536710	TIGD4	Q8IY51	512 aa		5.07	□□□□□ -1.6
PRKDC-208	ENST00000536710	CDK20	Q8IZL9	346 aa		5.07	□□□□□ -1.6
PRKDC-208	ENST00000536710	THAP8	Q8NA92	274 aa		5.07	□□□□□ -1.6
PRKDC-208	ENST00000536710	SPATA20	Q8TB22	786 aa		5.07	□□□□□ -1.6
PRKDC-208	ENST00000536710	HEXDC	Q8WVB3	486 aa		5.07	□□□□□ -1.6
PRKDC-208	ENST00000536710	SORCS1	Q8WY21	1168 aa		5.07	□□□□□ -1.6
PRKDC-208	ENST00000536710	SGK494	Q96LW2	274 aa		5.07	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms