RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 LRRC6Q86X45 466 aa12.08□□□□□ -0.48
PRKDC-207ENST00000536483 LURAP1LQ8IV03 231 aa12.08□□□□□ -0.48
PRKDC-207ENST00000536483 D2HGDHQ8N465 521 aa12.08□□□□□ -0.48
PRKDC-207ENST00000536483 OR6P1Q8NGX9 317 aa12.08□□□□□ -0.48
PRKDC-207ENST00000536483 CPT1BQ92523 772 aa12.08□□□□□ -0.48
PRKDC-207ENST00000536483 TFGQ92734 400 aaPredicted RBP12.08□□□□□ -0.48
PRKDC-207ENST00000536483 RUFY1Q96T51 708 aa12.08□□□□□ -0.48
PRKDC-207ENST00000536483 AKIRIN1Q9H9L7 192 aaPredicted RBP12.08□□□□□ -0.48
PRKDC-207ENST00000536483 PDE7BQ9NP56 450 aa12.08□□□□□ -0.48
PRKDC-207ENST00000536483 HRASLS2Q9NWW9 162 aa12.08□□□□□ -0.48
PRKDC-207ENST00000536483 SOX13Q9UN79 622 aa12.08□□□□□ -0.48
PRKDC-207ENST00000536483 PCDHGA6Q9Y5G7 932 aa12.08□□□□□ -0.48
PRKDC-207ENST00000536483 C21orf140B9A014 251 aa12.07□□□□□ -0.48
PRKDC-207ENST00000536483 IFRD1O00458 451 aaPredicted RBP12.07□□□□□ -0.48
PRKDC-207ENST00000536483 PRMT5O14744 637 aaPredicted RBP12.07□□□□□ -0.48
PRKDC-207ENST00000536483 CD3EAPO15446 510 aaKnown RBP12.07□□□□□ -0.48
PRKDC-207ENST00000536483 OR1I1O60431 355 aa12.07□□□□□ -0.48
PRKDC-207ENST00000536483 PHF2O75151 1096 aa12.07□□□□□ -0.48
PRKDC-207ENST00000536483 SLCO2B1O94956 709 aa12.07□□□□□ -0.48
PRKDC-207ENST00000536483 RECKO95980 971 aa12.07□□□□□ -0.48
PRKDC-207ENST00000536483 TCP1P17987 556 aaKnown RBP12.07□□□□□ -0.48
PRKDC-207ENST00000536483 ARCN1P48444 511 aaKnown RBP12.07□□□□□ -0.48
PRKDC-207ENST00000536483 SESN2P58004 480 aaPredicted RBP12.07□□□□□ -0.48
PRKDC-207ENST00000536483 GPS1Q13098 491 aa12.07□□□□□ -0.48
PRKDC-207ENST00000536483 TUBB3Q13509 450 aa12.07□□□□□ -0.48
PRKDC-207ENST00000536483 KIAA0930Q6ICG6 404 aaPredicted RBP12.07□□□□□ -0.48
PRKDC-207ENST00000536483 FAM199XQ6PEV8 388 aaPredicted RBP12.07□□□□□ -0.48
PRKDC-207ENST00000536483 OOSP2Q86WS3 158 aa12.07□□□□□ -0.48
PRKDC-207ENST00000536483 APLFQ8IW19 511 aaPredicted RBP12.07□□□□□ -0.48
PRKDC-207ENST00000536483 SIDT2Q8NBJ9 832 aaKnown RBP12.07□□□□□ -0.48
PRKDC-207ENST00000536483 TCF12Q99081 682 aa12.07□□□□□ -0.48
PRKDC-207ENST00000536483 AP1M1Q9BXS5 423 aa12.07□□□□□ -0.48
PRKDC-207ENST00000536483 TRIM55Q9BYV6 548 aa12.07□□□□□ -0.48
PRKDC-207ENST00000536483 CHRNA10Q9GZZ6 450 aa12.07□□□□□ -0.48
PRKDC-207ENST00000536483 P2RY12Q9H244 342 aa12.07□□□□□ -0.48
PRKDC-207ENST00000536483 ACTL8Q9H568 366 aa12.07□□□□□ -0.48
PRKDC-207ENST00000536483 LRRC4CQ9HCJ2 640 aa12.07□□□□□ -0.48
PRKDC-207ENST00000536483 XAB2Q9HCS7 855 aaKnown RBP12.07□□□□□ -0.48
PRKDC-207ENST00000536483 CATSPERZQ9NTU4 200 aa12.07□□□□□ -0.48
PRKDC-207ENST00000536483 PCYOX1Q9UHG3 505 aa12.07□□□□□ -0.48
PRKDC-207ENST00000536483 RARRES3Q9UL19 164 aa12.07□□□□□ -0.48
PRKDC-207ENST00000536483 CDYLQ9Y232 598 aa12.07□□□□□ -0.48
PRKDC-207ENST00000536483 BTRCQ9Y297 605 aa12.07□□□□□ -0.48
PRKDC-207ENST00000536483 CFAP20Q9Y6A4 193 aaKnown RBP12.07□□□□□ -0.48
PRKDC-207ENST00000536483 SPTBN1Q01082 2364 aaKnown RBP12.07□□□□□ -0.48
PRKDC-207ENST00000536483 FAM237BA0A1B0GVD1 139 aa12.06□□□□□ -0.48
PRKDC-207ENST00000536483 CCDC78A2IDD5 438 aa12.06□□□□□ -0.48
PRKDC-207ENST00000536483 TTLL8A6PVC2 850 aa12.06□□□□□ -0.48
PRKDC-207ENST00000536483 KIF2AO00139 706 aaPredicted RBP12.06□□□□□ -0.48
PRKDC-207ENST00000536483 ZBTB11O95625 1053 aaPredicted RBP12.06□□□□□ -0.48
PRKDC-207ENST00000536483 EBLN1P0CF75 366 aa12.06□□□□□ -0.48
PRKDC-207ENST00000536483 MGAT1P26572 445 aa12.06□□□□□ -0.48
PRKDC-207ENST00000536483 NMBRP28336 390 aa12.06□□□□□ -0.48
PRKDC-207ENST00000536483 CCR7P32248 378 aa12.06□□□□□ -0.48
PRKDC-207ENST00000536483 UQCRFS1P47985 274 aa12.06□□□□□ -0.48
PRKDC-207ENST00000536483 RPS18P62269 152 aaKnown RBP12.06□□□□□ -0.48
PRKDC-207ENST00000536483 HSD11B2P80365 405 aa12.06□□□□□ -0.48
PRKDC-207ENST00000536483 PLCL1Q15111 1095 aa12.06□□□□□ -0.48
PRKDC-207ENST00000536483 TYSND1Q2T9J0 566 aa12.06□□□□□ -0.48
PRKDC-207ENST00000536483 C4orf17Q53FE4 359 aa12.06□□□□□ -0.48
PRKDC-207ENST00000536483 ANKRD22Q5VYY1 191 aa12.06□□□□□ -0.48
PRKDC-207ENST00000536483 DUS1LQ6P1R4 473 aaKnown RBP12.06□□□□□ -0.48
PRKDC-207ENST00000536483 TBC1D21Q8IYX1 336 aa12.06□□□□□ -0.48
PRKDC-207ENST00000536483 SLC22A15Q8IZD6 547 aa12.06□□□□□ -0.48
PRKDC-207ENST00000536483 NAT8LQ8N9F0 302 aa12.06□□□□□ -0.48
PRKDC-207ENST00000536483 OR8K5Q8NH50 307 aa12.06□□□□□ -0.48
PRKDC-207ENST00000536483 OR5K2Q8NHB8 316 aa12.06□□□□□ -0.48
PRKDC-207ENST00000536483 GRK7Q8WTQ7 553 aa12.06□□□□□ -0.48
PRKDC-207ENST00000536483 ASZ1Q8WWH4 475 aa12.06□□□□□ -0.48
PRKDC-207ENST00000536483 LCN9Q8WX39 176 aa12.06□□□□□ -0.48
PRKDC-207ENST00000536483 MAP3K3Q99759 626 aa12.06□□□□□ -0.48
PRKDC-207ENST00000536483 PITPNM3Q9BZ71 974 aa12.06□□□□□ -0.48
PRKDC-207ENST00000536483 SYTL2Q9HCH5 934 aa12.06□□□□□ -0.48
PRKDC-207ENST00000536483 LATS2Q9NRM7 1088 aa12.06□□□□□ -0.48
PRKDC-207ENST00000536483 C1GALT1Q9NS00 363 aa12.06□□□□□ -0.48
PRKDC-207ENST00000536483 SYBUQ9NX95 663 aa12.06□□□□□ -0.48
PRKDC-207ENST00000536483 MARCH4Q9P2E8 410 aaPredicted RBP12.06□□□□□ -0.48
PRKDC-207ENST00000536483 POLG2Q9UHN1 485 aa12.06□□□□□ -0.48
PRKDC-207ENST00000536483 ANAPC5Q9UJX4 755 aa12.06□□□□□ -0.48
PRKDC-207ENST00000536483 POMT2Q9UKY4 750 aa12.06□□□□□ -0.48
PRKDC-207ENST00000536483 UTP20O75691 2785 aaKnown RBP12.06□□□□□ -0.48
PRKDC-207ENST00000536483 ICE1Q9Y2F5 2266 aa12.06□□□□□ -0.48
PRKDC-207ENST00000536483 NOTCH2Q04721 2471 aa12.05□□□□□ -0.48
PRKDC-207ENST00000536483 GOLGA6L10A0A0M3HER8 536 aa12.05□□□□□ -0.48
PRKDC-207ENST00000536483 OR6C74A6NCV1 312 aa12.05□□□□□ -0.48
PRKDC-207ENST00000536483 SDR42E2A6NKP2 422 aa12.05□□□□□ -0.48
PRKDC-207ENST00000536483 VPS4BO75351 444 aa12.05□□□□□ -0.48
PRKDC-207ENST00000536483 TMEM63AO94886 807 aa12.05□□□□□ -0.48
PRKDC-207ENST00000536483 TPBGLP0DKB5 382 aa12.05□□□□□ -0.48
PRKDC-207ENST00000536483 GNLYP22749 145 aa12.05□□□□□ -0.48
PRKDC-207ENST00000536483 AOAHP28039 575 aa12.05□□□□□ -0.48
PRKDC-207ENST00000536483 PREPP48147 710 aa12.05□□□□□ -0.48
PRKDC-207ENST00000536483 KPNA2P52292 529 aaKnown RBP12.05□□□□□ -0.48
PRKDC-207ENST00000536483 CRADDP78560 199 aa12.05□□□□□ -0.48
PRKDC-207ENST00000536483 ACY1Q03154 408 aa12.05□□□□□ -0.48
PRKDC-207ENST00000536483 CHAF1BQ13112 559 aa12.05□□□□□ -0.48
PRKDC-207ENST00000536483 TRIP13Q15645 432 aaPredicted RBP12.05□□□□□ -0.48
PRKDC-207ENST00000536483 DNAJC21Q5F1R6 531 aaKnown RBP12.05□□□□□ -0.48
PRKDC-207ENST00000536483 DNTTIP2Q5QJE6 756 aaKnown RBP12.05□□□□□ -0.48
PRKDC-207ENST00000536483 HIST2H2BCQ6DN03 193 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms