RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 TRAF3Q13114 568 aa13.72□□□□□ -0.21
LIG1-203ENST00000536218 DUSP7Q16829 419 aa13.72□□□□□ -0.21
LIG1-203ENST00000536218 CTU2Q2VPK5 515 aaKnown RBP13.72□□□□□ -0.21
LIG1-203ENST00000536218 AFMIDQ63HM1 303 aa13.72□□□□□ -0.21
LIG1-203ENST00000536218 NADSYN1Q6IA69 706 aa13.72□□□□□ -0.21
LIG1-203ENST00000536218 CNSTQ6PJW8 725 aa13.72□□□□□ -0.21
LIG1-203ENST00000536218 ANKS3Q6ZW76 656 aa13.72□□□□□ -0.21
LIG1-203ENST00000536218 CEP97Q8IW35 865 aa13.72□□□□□ -0.21
LIG1-203ENST00000536218 ZNF683Q8IZ20 524 aa13.72□□□□□ -0.21
LIG1-203ENST00000536218 GTF2H4Q92759 462 aa13.72□□□□□ -0.21
LIG1-203ENST00000536218 SLC30A3Q99726 388 aa13.72□□□□□ -0.21
LIG1-203ENST00000536218 AIFM2Q9BRQ8 373 aa13.72□□□□□ -0.21
LIG1-203ENST00000536218 SLC25A51Q9H1U9 297 aa13.72□□□□□ -0.21
LIG1-203ENST00000536218 RHOJQ9H4E5 214 aa13.72□□□□□ -0.21
LIG1-203ENST00000536218 ELAC1Q9H777 363 aaKnown RBP13.72□□□□□ -0.21
LIG1-203ENST00000536218 TMEM248Q9NWD8 314 aa13.72□□□□□ -0.21
LIG1-203ENST00000536218 C14orf119Q9NWQ9 140 aa13.72□□□□□ -0.21
LIG1-203ENST00000536218 ACTR3BQ9P1U1 418 aa13.72□□□□□ -0.21
LIG1-203ENST00000536218 SNX6Q9UNH7 406 aa13.72□□□□□ -0.21
LIG1-203ENST00000536218 OR51F1A6NGY5 319 aa13.71□□□□□ -0.21
LIG1-203ENST00000536218 ANGPT2O15123 496 aa13.71□□□□□ -0.21
LIG1-203ENST00000536218 EPN2O95208 641 aa13.71□□□□□ -0.21
LIG1-203ENST00000536218 TCF3P15923 654 aa13.71□□□□□ -0.21
LIG1-203ENST00000536218 HTR7P34969 479 aa13.71□□□□□ -0.21
LIG1-203ENST00000536218 CD47Q08722 323 aa13.71□□□□□ -0.21
LIG1-203ENST00000536218 EPS8Q12929 822 aa13.71□□□□□ -0.21
LIG1-203ENST00000536218 PPP1R8Q12972 351 aaKnown RBP13.71□□□□□ -0.21
LIG1-203ENST00000536218 TAF12Q16514 161 aa13.71□□□□□ -0.21
LIG1-203ENST00000536218 TYSND1Q2T9J0 566 aa13.71□□□□□ -0.21
LIG1-203ENST00000536218 DENND1CQ8IV53 801 aa13.71□□□□□ -0.21
LIG1-203ENST00000536218 PELI3Q8N2H9 469 aa13.71□□□□□ -0.21
LIG1-203ENST00000536218 FSTL5Q8N475 847 aaPredicted RBP13.71□□□□□ -0.21
LIG1-203ENST00000536218 ZNF555Q8NEP9 628 aa13.71□□□□□ -0.21
LIG1-203ENST00000536218 OR7D4Q8NG98 312 aa13.71□□□□□ -0.21
LIG1-203ENST00000536218 LGALS12Q96DT0 336 aa13.71□□□□□ -0.21
LIG1-203ENST00000536218 EXOC2Q96KP1 924 aa13.71□□□□□ -0.21
LIG1-203ENST00000536218 SEMA3CQ99985 751 aa13.71□□□□□ -0.21
LIG1-203ENST00000536218 NECTIN3Q9NQS3 549 aa13.71□□□□□ -0.21
LIG1-203ENST00000536218 FAM95CA0A1B0GW59 222 aa13.71□□□□□ -0.21
LIG1-203ENST00000536218 CCDC154A6NI56 674 aa13.71□□□□□ -0.21
LIG1-203ENST00000536218 TSPAN3O60637 253 aa13.71□□□□□ -0.21
LIG1-203ENST00000536218 GPIP06744 558 aa13.71□□□□□ -0.21
LIG1-203ENST00000536218 TSPAN8P19075 237 aa13.71□□□□□ -0.21
LIG1-203ENST00000536218 RPS24P62847 133 aaKnown RBP13.71□□□□□ -0.21
LIG1-203ENST00000536218 TXNDC11Q6PKC3 985 aa13.71□□□□□ -0.21
LIG1-203ENST00000536218 HORMAD1Q86X24 394 aa13.71□□□□□ -0.21
LIG1-203ENST00000536218 MFSD6LQ8IWD5 586 aa13.71□□□□□ -0.21
LIG1-203ENST00000536218 PGBD5Q8N414 524 aa13.71□□□□□ -0.21
LIG1-203ENST00000536218 DACT3Q96B18 629 aaPredicted RBP13.71□□□□□ -0.21
LIG1-203ENST00000536218 CMTM6Q9NX76 183 aa13.71□□□□□ -0.21
LIG1-203ENST00000536218 AASSQ9UDR5 926 aa13.71□□□□□ -0.21
LIG1-203ENST00000536218 FBXO5Q9UKT4 447 aa13.71□□□□□ -0.21
LIG1-203ENST00000536218 H7C4K7 107 aa13.71□□□□□ -0.22
LIG1-203ENST00000536218 COL6A1P12109 1028 aa13.71□□□□□ -0.22
LIG1-203ENST00000536218 TACR2P21452 398 aa13.71□□□□□ -0.22
LIG1-203ENST00000536218 GRK3P35626 688 aa13.71□□□□□ -0.22
LIG1-203ENST00000536218 HK2P52789 917 aa13.71□□□□□ -0.22
LIG1-203ENST00000536218 PLK1P53350 603 aa13.71□□□□□ -0.22
LIG1-203ENST00000536218 RABL3Q5HYI8 236 aa13.71□□□□□ -0.22
LIG1-203ENST00000536218 KDELC1Q6UW63 502 aa13.71□□□□□ -0.22
LIG1-203ENST00000536218 TBC1D21Q8IYX1 336 aa13.71□□□□□ -0.22
LIG1-203ENST00000536218 FLCNQ8NFG4 579 aa13.71□□□□□ -0.22
LIG1-203ENST00000536218 MCOLN3Q8TDD5 553 aa13.71□□□□□ -0.22
LIG1-203ENST00000536218 BLOC1S5Q8TDH9 187 aa13.71□□□□□ -0.22
LIG1-203ENST00000536218 ST6GAL2Q96JF0 529 aa13.71□□□□□ -0.22
LIG1-203ENST00000536218 NECTIN4Q96NY8 510 aa13.71□□□□□ -0.22
LIG1-203ENST00000536218 GPR22Q99680 433 aa13.71□□□□□ -0.22
LIG1-203ENST00000536218 C8orf4Q9NR00 106 aa13.71□□□□□ -0.22
LIG1-203ENST00000536218 OLA1Q9NTK5 396 aaKnown RBP13.71□□□□□ -0.22
LIG1-203ENST00000536218 SMPD4Q9NXE4 827 aa13.71□□□□□ -0.22
LIG1-203ENST00000536218 NOS1APO75052 506 aaPredicted RBP13.7□□□□□ -0.22
LIG1-203ENST00000536218 SBK3P0C264 359 aa13.7□□□□□ -0.22
LIG1-203ENST00000536218 NAGAP17050 411 aa13.7□□□□□ -0.22
LIG1-203ENST00000536218 DNAJB2P25686 324 aa13.7□□□□□ -0.22
LIG1-203ENST00000536218 SLC12A2P55011 1212 aa13.7□□□□□ -0.22
LIG1-203ENST00000536218 TAS2R39P59534 338 aa13.7□□□□□ -0.22
LIG1-203ENST00000536218 DAG1Q14118 895 aa13.7□□□□□ -0.22
LIG1-203ENST00000536218 RBM20Q5T481 1227 aaKnown RBP13.7□□□□□ -0.22
LIG1-203ENST00000536218 LCN8Q6JVE9 175 aa13.7□□□□□ -0.22
LIG1-203ENST00000536218 LINC00299Q6ZSB3 139 aa13.7□□□□□ -0.22
LIG1-203ENST00000536218 RDH11Q8TC12 318 aa13.7□□□□□ -0.22
LIG1-203ENST00000536218 IMP4Q96G21 291 aaKnown RBP13.7□□□□□ -0.22
LIG1-203ENST00000536218 FYTTD1Q96QD9 318 aaKnown RBP13.7□□□□□ -0.22
LIG1-203ENST00000536218 FEM1AQ9BSK4 669 aa13.7□□□□□ -0.22
LIG1-203ENST00000536218 NUAK2Q9H093 628 aa13.7□□□□□ -0.22
LIG1-203ENST00000536218 ERVK-18Q9QC07 812 aa13.7□□□□□ -0.22
LIG1-203ENST00000536218 BTBD3Q9Y2F9 522 aa13.7□□□□□ -0.22
LIG1-203ENST00000536218 AGAP5A6NIR3 686 aa13.7□□□□□ -0.22
LIG1-203ENST00000536218 F5H5T6 163 aa13.7□□□□□ -0.22
LIG1-203ENST00000536218 MUSKO15146 869 aa13.7□□□□□ -0.22
LIG1-203ENST00000536218 FADS2O95864 444 aaKnown RBP13.7□□□□□ -0.22
LIG1-203ENST00000536218 GSTM1P09488 218 aa13.7□□□□□ -0.22
LIG1-203ENST00000536218 PAMP19021 973 aa13.7□□□□□ -0.22
LIG1-203ENST00000536218 SLC6A4P31645 630 aa13.7□□□□□ -0.22
LIG1-203ENST00000536218 S100A5P33763 92 aa13.7□□□□□ -0.22
LIG1-203ENST00000536218 ATP5C1P36542 298 aaKnown RBP13.7□□□□□ -0.22
LIG1-203ENST00000536218 PIGAP37287 484 aa13.7□□□□□ -0.22
LIG1-203ENST00000536218 ELAVL2Q12926 359 aaKnown RBP13.7□□□□□ -0.22
LIG1-203ENST00000536218 GALNT3Q14435 633 aa13.7□□□□□ -0.22
LIG1-203ENST00000536218 ZNF235Q14590 738 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms