RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 MAGOHBQ96A72 148 aaKnown RBP9.32□□□□□ -0.92
SSBP3-215ENST00000533946 FCRL4Q96PJ5 515 aa9.32□□□□□ -0.92
SSBP3-215ENST00000533946 TEFMQ96QE5 360 aaKnown RBP9.32□□□□□ -0.92
SSBP3-215ENST00000533946 KIFC1Q9BW19 673 aa9.32□□□□□ -0.92
SSBP3-215ENST00000533946 PITPNM3Q9BZ71 974 aa9.32□□□□□ -0.92
SSBP3-215ENST00000533946 TFB2MQ9H5Q4 396 aaKnown RBP9.32□□□□□ -0.92
SSBP3-215ENST00000533946 LHX9Q9NQ69 397 aa9.32□□□□□ -0.92
SSBP3-215ENST00000533946 STARD5Q9NSY2 213 aa9.32□□□□□ -0.92
SSBP3-215ENST00000533946 CATSPERZQ9NTU4 200 aa9.32□□□□□ -0.92
SSBP3-215ENST00000533946 SOHLH2Q9NX45 425 aa9.32□□□□□ -0.92
SSBP3-215ENST00000533946 RARRES3Q9UL19 164 aa9.32□□□□□ -0.92
SSBP3-215ENST00000533946 ASF1AQ9Y294 204 aa9.32□□□□□ -0.92
SSBP3-215ENST00000533946 BTRCQ9Y297 605 aa9.32□□□□□ -0.92
SSBP3-215ENST00000533946 CRYL1Q9Y2S2 319 aa9.32□□□□□ -0.92
SSBP3-215ENST00000533946 MED16Q9Y2X0 877 aa9.32□□□□□ -0.92
SSBP3-215ENST00000533946 CDC14CA4D256 554 aa9.31□□□□□ -0.92
SSBP3-215ENST00000533946 ERI2A8K979 691 aaKnown RBP9.31□□□□□ -0.92
SSBP3-215ENST00000533946 B8ZZF3 427 aa9.31□□□□□ -0.92
SSBP3-215ENST00000533946 TOX3O15405 576 aaPredicted RBP9.31□□□□□ -0.92
SSBP3-215ENST00000533946 SCRG1O75711 98 aa9.31□□□□□ -0.92
SSBP3-215ENST00000533946 AP2A2O94973 939 aa9.31□□□□□ -0.92
SSBP3-215ENST00000533946 ITGAXP20702 1163 aa9.31□□□□□ -0.92
SSBP3-215ENST00000533946 MCM3P25205 808 aa9.31□□□□□ -0.92
SSBP3-215ENST00000533946 PTGIRP43119 386 aa9.31□□□□□ -0.92
SSBP3-215ENST00000533946 CD151P48509 253 aa9.31□□□□□ -0.92
SSBP3-215ENST00000533946 EIF3BP55884 814 aaKnown RBP9.31□□□□□ -0.92
SSBP3-215ENST00000533946 TIAL1Q01085 375 aaKnown RBP eCLIP9.31□□□□□ -0.923e-6■■■■□ 20.6
SSBP3-215ENST00000533946 CTBP1Q13363 440 aa9.31□□□□□ -0.92
SSBP3-215ENST00000533946 DNASE1L3Q13609 305 aa9.31□□□□□ -0.92
SSBP3-215ENST00000533946 FASTKQ14296 549 aaKnown RBP9.31□□□□□ -0.92
SSBP3-215ENST00000533946 ITIH4Q14624 930 aa9.31□□□□□ -0.92
SSBP3-215ENST00000533946 IL11RAQ14626 422 aa9.31□□□□□ -0.92
SSBP3-215ENST00000533946 SLC9A5Q14940 896 aa9.31□□□□□ -0.92
SSBP3-215ENST00000533946 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.31□□□□□ -0.92
SSBP3-215ENST00000533946 FASTKD1Q53R41 847 aaKnown RBP9.31□□□□□ -0.92
SSBP3-215ENST00000533946 ACSBG2Q5FVE4 666 aa9.31□□□□□ -0.92
SSBP3-215ENST00000533946 C1orf189Q5VU69 101 aa9.31□□□□□ -0.92
SSBP3-215ENST00000533946 LRRC8BQ6P9F7 803 aa9.31□□□□□ -0.92
SSBP3-215ENST00000533946 ZNF605Q86T29 641 aa9.31□□□□□ -0.92
SSBP3-215ENST00000533946 PPP1R3BQ86XI6 285 aa9.31□□□□□ -0.92
SSBP3-215ENST00000533946 SLC22A15Q8IZD6 547 aa9.31□□□□□ -0.92
SSBP3-215ENST00000533946 PPHLN1Q8NEY8 458 aaKnown RBP9.31□□□□□ -0.92
SSBP3-215ENST00000533946 GIMAP7Q8NHV1 300 aa9.31□□□□□ -0.92
SSBP3-215ENST00000533946 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.31□□□□□ -0.92
SSBP3-215ENST00000533946 UBXN4Q92575 508 aa9.31□□□□□ -0.92
SSBP3-215ENST00000533946 LPGAT1Q92604 370 aa9.31□□□□□ -0.92
SSBP3-215ENST00000533946 STAMBPL1Q96FJ0 436 aa9.31□□□□□ -0.92
SSBP3-215ENST00000533946 WBP1Q96G27 269 aa9.31□□□□□ -0.92
SSBP3-215ENST00000533946 ALS2CR12Q96Q35 445 aa9.31□□□□□ -0.92
SSBP3-215ENST00000533946 OSBPL9Q96SU4 736 aa9.31□□□□□ -0.92
SSBP3-215ENST00000533946 C19orf43Q9BQ61 176 aa9.31□□□□□ -0.92
SSBP3-215ENST00000533946 WDR83Q9BRX9 315 aaKnown RBP9.31□□□□□ -0.92
SSBP3-215ENST00000533946 FRMD8P1Q9BZ68 369 aaPredicted RBP9.31□□□□□ -0.92
SSBP3-215ENST00000533946 ACTL8Q9H568 366 aa9.31□□□□□ -0.92
SSBP3-215ENST00000533946 EIF2B3Q9NR50 452 aaKnown RBP9.31□□□□□ -0.92
SSBP3-215ENST00000533946 LATS2Q9NRM7 1088 aa9.31□□□□□ -0.92
SSBP3-215ENST00000533946 PCMTD2Q9NV79 361 aa9.31□□□□□ -0.92
SSBP3-215ENST00000533946 COLEC10Q9Y6Z7 277 aa9.31□□□□□ -0.92
SSBP3-215ENST00000533946 ANKRD12Q6UB98 2062 aa9.31□□□□□ -0.92
SSBP3-215ENST00000533946 ZCWPW2A0A1B0GU75 182 aa9.3□□□□□ -0.92
SSBP3-215ENST00000533946 PIPSLA2A3N6 862 aa9.3□□□□□ -0.92
SSBP3-215ENST00000533946 ZNF891A8MT65 544 aaPredicted RBP9.3□□□□□ -0.92
SSBP3-215ENST00000533946 GOLGA6L6A8MZA4 724 aa9.3□□□□□ -0.92
SSBP3-215ENST00000533946 IFRD1O00458 451 aaPredicted RBP9.3□□□□□ -0.92
SSBP3-215ENST00000533946 LIN7AO14910 233 aaPredicted RBP9.3□□□□□ -0.92
SSBP3-215ENST00000533946 SLC28A2O43868 658 aa9.3□□□□□ -0.92
SSBP3-215ENST00000533946 PRICKLE3O43900 615 aaPredicted RBP9.3□□□□□ -0.92
SSBP3-215ENST00000533946 ZBTB11O95625 1053 aaPredicted RBP9.3□□□□□ -0.92
SSBP3-215ENST00000533946 S1PR4O95977 384 aa9.3□□□□□ -0.92
SSBP3-215ENST00000533946 ITGB2P05107 769 aa9.3□□□□□ -0.92
SSBP3-215ENST00000533946 TPSB2P20231 275 aa9.3□□□□□ -0.92
SSBP3-215ENST00000533946 IVDP26440 423 aa9.3□□□□□ -0.92
SSBP3-215ENST00000533946 PKLRP30613 574 aa9.3□□□□□ -0.92
SSBP3-215ENST00000533946 RORAP35398 523 aa9.3□□□□□ -0.92
SSBP3-215ENST00000533946 MAGEA6P43360 314 aa9.3□□□□□ -0.92
SSBP3-215ENST00000533946 TUBB4BP68371 445 aa9.3□□□□□ -0.92
SSBP3-215ENST00000533946 PRAMEP78395 509 aa9.3□□□□□ -0.92
SSBP3-215ENST00000533946 MPP1Q00013 466 aa9.3□□□□□ -0.92
SSBP3-215ENST00000533946 RPA4Q13156 261 aa9.3□□□□□ -0.92
SSBP3-215ENST00000533946 KCNAB2Q13303 367 aa9.3□□□□□ -0.92
SSBP3-215ENST00000533946 CUL1Q13616 776 aa9.3□□□□□ -0.92
SSBP3-215ENST00000533946 TUBB2AQ13885 445 aa9.3□□□□□ -0.92
SSBP3-215ENST00000533946 TPSAB1Q15661 275 aa9.3□□□□□ -0.92
SSBP3-215ENST00000533946 IGFBP7Q16270 282 aa9.3□□□□□ -0.92
SSBP3-215ENST00000533946 CYP1B1Q16678 543 aa9.3□□□□□ -0.92
SSBP3-215ENST00000533946 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.3□□□□□ -0.92
SSBP3-215ENST00000533946 ZNF385CQ66K41 422 aaPredicted RBP9.3□□□□□ -0.92
SSBP3-215ENST00000533946 FCRL6Q6DN72 434 aa9.3□□□□□ -0.92
SSBP3-215ENST00000533946 BORAQ6PGQ7 559 aa9.3□□□□□ -0.92
SSBP3-215ENST00000533946 CNSTQ6PJW8 725 aa9.3□□□□□ -0.92
SSBP3-215ENST00000533946 CCDC137Q6PK04 289 aaKnown RBP9.3□□□□□ -0.92
SSBP3-215ENST00000533946 SPESP1Q6UW49 350 aa9.3□□□□□ -0.92
SSBP3-215ENST00000533946 FAM198BQ6UWH4 519 aa9.3□□□□□ -0.92
SSBP3-215ENST00000533946 PRICKLE2Q7Z3G6 844 aa9.3□□□□□ -0.92
SSBP3-215ENST00000533946 TMEM126BQ8IUX1 230 aa9.3□□□□□ -0.92
SSBP3-215ENST00000533946 TXLNBQ8N3L3 684 aa9.3□□□□□ -0.92
SSBP3-215ENST00000533946 ESX1Q8N693 406 aa9.3□□□□□ -0.92
SSBP3-215ENST00000533946 NAT8LQ8N9F0 302 aa9.3□□□□□ -0.92
SSBP3-215ENST00000533946 LSM14AQ8ND56 463 aaKnown RBP9.3□□□□□ -0.92
SSBP3-215ENST00000533946 OR5K2Q8NHB8 316 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms