RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 AFF4Q9UHB7 1163 aaKnown RBP18.95■□□□□ 0.62
CAPN1-226ENST00000533820 BAG5Q9UL15 447 aa18.95■□□□□ 0.62
CAPN1-226ENST00000533820 ZBBXA8MT70 800 aa18.95■□□□□ 0.62
CAPN1-226ENST00000533820 FFAR2O15552 330 aa18.95■□□□□ 0.62
CAPN1-226ENST00000533820 KLK8O60259 260 aa18.95■□□□□ 0.62
CAPN1-226ENST00000533820 HTR1BP28222 390 aa18.95■□□□□ 0.62
CAPN1-226ENST00000533820 OPRL1P41146 370 aa18.95■□□□□ 0.62
CAPN1-226ENST00000533820 DGCR6Q14129 220 aa18.95■□□□□ 0.62
CAPN1-226ENST00000533820 COLGALT2Q8IYK4 626 aa18.95■□□□□ 0.62
CAPN1-226ENST00000533820 LKAAEAR1Q8TD35 194 aa18.95■□□□□ 0.62
CAPN1-226ENST00000533820 CHPT1Q8WUD6 406 aa18.95■□□□□ 0.62
CAPN1-226ENST00000533820 FUBP3Q96I24 572 aaKnown RBP eCLIP18.95■□□□□ 0.62
CAPN1-226ENST00000533820 MYOCQ99972 504 aa18.95■□□□□ 0.62
CAPN1-226ENST00000533820 ARHGAP39Q9C0H5 1083 aa18.95■□□□□ 0.62
CAPN1-226ENST00000533820 ELOVL2Q9NXB9 296 aa18.95■□□□□ 0.62
CAPN1-226ENST00000533820 SLC25A37Q9NYZ2 338 aa18.95■□□□□ 0.62
CAPN1-226ENST00000533820 NEUROG3Q9Y4Z2 214 aa18.95■□□□□ 0.62
CAPN1-226ENST00000533820 ANKRD28O15084 1053 aa18.94■□□□□ 0.62
CAPN1-226ENST00000533820 TULP3O75386 442 aa18.94■□□□□ 0.62
CAPN1-226ENST00000533820 DIRAS1O95057 198 aa18.94■□□□□ 0.62
CAPN1-226ENST00000533820 FTH1P02794 183 aa18.94■□□□□ 0.62
CAPN1-226ENST00000533820 SIM2Q14190 667 aaPredicted RBP18.94■□□□□ 0.62
CAPN1-226ENST00000533820 CARTPTQ16568 116 aa18.94■□□□□ 0.62
CAPN1-226ENST00000533820 DPY19L1Q2PZI1 675 aa18.94■□□□□ 0.62
CAPN1-226ENST00000533820 RNF219Q5W0B1 726 aaPredicted RBP18.94■□□□□ 0.62
CAPN1-226ENST00000533820 CCDC81Q6ZN84 652 aa18.94■□□□□ 0.62
CAPN1-226ENST00000533820 DPP10Q8N608 796 aa18.94■□□□□ 0.62
CAPN1-226ENST00000533820 ZBTB18Q99592 522 aa18.94■□□□□ 0.62
CAPN1-226ENST00000533820 C8orf4Q9NR00 106 aa18.94■□□□□ 0.62
CAPN1-226ENST00000533820 HEBP1Q9NRV9 189 aa18.94■□□□□ 0.62
CAPN1-226ENST00000533820 PKP3Q9Y446 797 aa18.94■□□□□ 0.62
CAPN1-226ENST00000533820 TRPM7Q96QT4 1865 aa18.94■□□□□ 0.62
CAPN1-226ENST00000533820 COL4A4P53420 1690 aaPredicted RBP18.94■□□□□ 0.62
CAPN1-226ENST00000533820 CXCR6O00574 342 aa18.94■□□□□ 0.62
CAPN1-226ENST00000533820 ACSL4O60488 711 aa18.94■□□□□ 0.62
CAPN1-226ENST00000533820 CLPXO76031 633 aa18.94■□□□□ 0.62
CAPN1-226ENST00000533820 C1QCP02747 245 aa18.94■□□□□ 0.62
CAPN1-226ENST00000533820 PFKLP17858 780 aa18.94■□□□□ 0.62
CAPN1-226ENST00000533820 RPL17P18621 184 aaKnown RBP18.94■□□□□ 0.62
CAPN1-226ENST00000533820 IL5RAQ01344 420 aa18.94■□□□□ 0.62
CAPN1-226ENST00000533820 IGFN1Q86VF2 1251 aa18.94■□□□□ 0.62
CAPN1-226ENST00000533820 SLC38A6Q8IZM9 456 aa18.94■□□□□ 0.62
CAPN1-226ENST00000533820 SUN5Q8TC36 379 aa18.94■□□□□ 0.62
CAPN1-226ENST00000533820 GTF2H4Q92759 462 aa18.94■□□□□ 0.62
CAPN1-226ENST00000533820 KLHL3Q9UH77 587 aa18.94■□□□□ 0.62
CAPN1-226ENST00000533820 BCAS1O75363 584 aaPredicted RBP18.94■□□□□ 0.62
CAPN1-226ENST00000533820 LRATO95237 230 aa18.94■□□□□ 0.62
CAPN1-226ENST00000533820 UBL4AP11441 157 aa18.94■□□□□ 0.62
CAPN1-226ENST00000533820 AKT1P31749 480 aa18.94■□□□□ 0.62
CAPN1-226ENST00000533820 GKP32189 559 aa18.94■□□□□ 0.62
CAPN1-226ENST00000533820 CLCN7P51798 805 aa18.94■□□□□ 0.62
CAPN1-226ENST00000533820 TMBIM6P55061 237 aa18.94■□□□□ 0.62
CAPN1-226ENST00000533820 HUNKP57058 714 aa18.94■□□□□ 0.62
CAPN1-226ENST00000533820 CPSF6Q16630 551 aaKnown RBP eCLIP18.94■□□□□ 0.62
CAPN1-226ENST00000533820 SBSNQ6UWP8 590 aa18.94■□□□□ 0.62
CAPN1-226ENST00000533820 EID2BQ96D98 161 aa18.94■□□□□ 0.62
CAPN1-226ENST00000533820 OR52E6Q96RD3 313 aa18.94■□□□□ 0.62
CAPN1-226ENST00000533820 CTRCQ99895 268 aa18.94■□□□□ 0.62
CAPN1-226ENST00000533820 C1QTNF3Q9BXJ4 246 aa18.94■□□□□ 0.62
CAPN1-226ENST00000533820 UGT2B28Q9BY64 529 aa18.94■□□□□ 0.62
CAPN1-226ENST00000533820 MAGEH1Q9H213 219 aa18.94■□□□□ 0.62
CAPN1-226ENST00000533820 PAK1IP1Q9NWT1 392 aaPredicted RBP18.94■□□□□ 0.62
CAPN1-226ENST00000533820 WWOXQ9NZC7 414 aa18.94■□□□□ 0.62
CAPN1-226ENST00000533820 ERVK-11Q9UQG0 969 aa18.94■□□□□ 0.62
CAPN1-226ENST00000533820 FCF1Q9Y324 198 aaKnown RBP18.94■□□□□ 0.62
CAPN1-226ENST00000533820 SNX5Q9Y5X3 404 aa18.94■□□□□ 0.62
CAPN1-226ENST00000533820 GLTPD2A6NH11 291 aa18.93■□□□□ 0.62
CAPN1-226ENST00000533820 FMO3P31513 532 aa18.93■□□□□ 0.62
CAPN1-226ENST00000533820 GTF2H3Q13889 308 aa18.93■□□□□ 0.62
CAPN1-226ENST00000533820 PRSS55Q6UWB4 352 aaPredicted RBP18.93■□□□□ 0.62
CAPN1-226ENST00000533820 LEMD2Q8NC56 503 aa18.93■□□□□ 0.62
CAPN1-226ENST00000533820 ZNF548Q8NEK5 533 aaPredicted RBP18.93■□□□□ 0.62
CAPN1-226ENST00000533820 ABHD11Q8NFV4 315 aa18.93■□□□□ 0.62
CAPN1-226ENST00000533820 RAB2BQ8WUD1 216 aa18.93■□□□□ 0.62
CAPN1-226ENST00000533820 KCNJ9Q92806 393 aa18.93■□□□□ 0.62
CAPN1-226ENST00000533820 OLA1Q9NTK5 396 aaKnown RBP18.93■□□□□ 0.62
CAPN1-226ENST00000533820 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.93■□□□□ 0.62
CAPN1-226ENST00000533820 ELOVL7A1L3X0 281 aa18.93■□□□□ 0.62
CAPN1-226ENST00000533820 MTMR11A4FU01 709 aa18.93■□□□□ 0.62
CAPN1-226ENST00000533820 UPK3BL1B0FP48 263 aa18.93■□□□□ 0.62
CAPN1-226ENST00000533820 UPK3BL2E5RIL1 263 aa18.93■□□□□ 0.62
CAPN1-226ENST00000533820 SERPINA1P01009 418 aa18.93■□□□□ 0.62
CAPN1-226ENST00000533820 IGLV3-27P01718 113 aa18.93■□□□□ 0.62
CAPN1-226ENST00000533820 KLKB1P03952 638 aa18.93■□□□□ 0.62
CAPN1-226ENST00000533820 IDUAP35475 653 aa18.93■□□□□ 0.62
CAPN1-226ENST00000533820 CLK3P49761 638 aaKnown RBP18.93■□□□□ 0.62
CAPN1-226ENST00000533820 FPGSQ05932 587 aa18.93■□□□□ 0.62
CAPN1-226ENST00000533820 TRAF3Q13114 568 aa18.93■□□□□ 0.62
CAPN1-226ENST00000533820 ZNF177Q13360 481 aaPredicted RBP18.93■□□□□ 0.62
CAPN1-226ENST00000533820 SPATS1Q496A3 300 aa18.93■□□□□ 0.62
CAPN1-226ENST00000533820 TTC23Q5W5X9 447 aa18.93■□□□□ 0.62
CAPN1-226ENST00000533820 NECAB2Q7Z6G3 386 aa18.93■□□□□ 0.62
CAPN1-226ENST00000533820 MSRB3Q8IXL7 192 aa18.93■□□□□ 0.62
CAPN1-226ENST00000533820 TERB1Q8NA31 727 aa18.93■□□□□ 0.62
CAPN1-226ENST00000533820 OR7G1Q8NGA0 311 aa18.93■□□□□ 0.62
CAPN1-226ENST00000533820 BARD1Q99728 777 aaKnown RBP18.93■□□□□ 0.62
CAPN1-226ENST00000533820 RHNO1Q9BSD3 238 aa18.93■□□□□ 0.62
CAPN1-226ENST00000533820 LATS2Q9NRM7 1088 aa18.93■□□□□ 0.62
CAPN1-226ENST00000533820 DNAJB9Q9UBS3 223 aa18.93■□□□□ 0.62
CAPN1-226ENST00000533820 DAPK2Q9UIK4 370 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms