RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 EIF3BP55884 814 aaKnown RBP10.11□□□□□ -0.79
CAPN1-225ENST00000533704 GPS1Q13098 491 aa10.11□□□□□ -0.79
CAPN1-225ENST00000533704 GPS2Q13227 327 aa10.11□□□□□ -0.79
CAPN1-225ENST00000533704 TMED2Q15363 201 aa10.11□□□□□ -0.79
CAPN1-225ENST00000533704 DEFB110Q30KQ9 67 aa10.11□□□□□ -0.79
CAPN1-225ENST00000533704 CASC4Q6P4E1 433 aa10.11□□□□□ -0.79
CAPN1-225ENST00000533704 SPESP1Q6UW49 350 aa10.11□□□□□ -0.79
CAPN1-225ENST00000533704 UNC5AQ6ZN44 842 aa10.11□□□□□ -0.79
CAPN1-225ENST00000533704 TMEM135Q86UB9 458 aa10.11□□□□□ -0.79
CAPN1-225ENST00000533704 TAX1BP1Q86VP1 789 aa10.11□□□□□ -0.79
CAPN1-225ENST00000533704 VRK3Q8IV63 474 aa10.11□□□□□ -0.79
CAPN1-225ENST00000533704 TBC1D21Q8IYX1 336 aa10.11□□□□□ -0.79
CAPN1-225ENST00000533704 CARFQ8N187 725 aa10.11□□□□□ -0.79
CAPN1-225ENST00000533704 C2orf73Q8N5S3 287 aaPredicted RBP10.11□□□□□ -0.79
CAPN1-225ENST00000533704 OR8K5Q8NH50 307 aa10.11□□□□□ -0.79
CAPN1-225ENST00000533704 OR1L3Q8NH93 324 aa10.11□□□□□ -0.79
CAPN1-225ENST00000533704 OR5K2Q8NHB8 316 aa10.11□□□□□ -0.79
CAPN1-225ENST00000533704 C9orf43Q8TAL5 461 aaPredicted RBP10.11□□□□□ -0.79
CAPN1-225ENST00000533704 GSDMBQ8TAX9 411 aa10.11□□□□□ -0.79
CAPN1-225ENST00000533704 SKA2Q8WVK7 121 aaPredicted RBP10.11□□□□□ -0.79
CAPN1-225ENST00000533704 APOBEC4Q8WW27 367 aaKnown RBP10.11□□□□□ -0.79
CAPN1-225ENST00000533704 CPT1BQ92523 772 aa10.11□□□□□ -0.79
CAPN1-225ENST00000533704 MS4A14Q96JA4 679 aa10.11□□□□□ -0.79
CAPN1-225ENST00000533704 TRAPPC9Q96Q05 1148 aa10.11□□□□□ -0.79
CAPN1-225ENST00000533704 AP1M1Q9BXS5 423 aa10.11□□□□□ -0.79
CAPN1-225ENST00000533704 IL22Q9GZX6 179 aa10.11□□□□□ -0.79
CAPN1-225ENST00000533704 ACTL8Q9H568 366 aa10.11□□□□□ -0.79
CAPN1-225ENST00000533704 IRAK4Q9NWZ3 460 aa10.11□□□□□ -0.79
CAPN1-225ENST00000533704 SPHK1Q9NYA1 384 aa10.11□□□□□ -0.79
CAPN1-225ENST00000533704 POLG2Q9UHN1 485 aa10.11□□□□□ -0.79
CAPN1-225ENST00000533704 POLHQ9Y253 713 aa10.11□□□□□ -0.79
CAPN1-225ENST00000533704 NBASA2RRP1 2371 aa10.11□□□□□ -0.79
CAPN1-225ENST00000533704 C21orf140B9A014 251 aa10.1□□□□□ -0.79
CAPN1-225ENST00000533704 AP3B1O00203 1094 aa10.1□□□□□ -0.79
CAPN1-225ENST00000533704 PRMT5O14744 637 aaPredicted RBP10.1□□□□□ -0.79
CAPN1-225ENST00000533704 TERTO14746 1132 aaKnown RBP10.1□□□□□ -0.79
CAPN1-225ENST00000533704 KDM1AO60341 852 aa10.1□□□□□ -0.79
CAPN1-225ENST00000533704 CHRM5P08912 532 aaPredicted RBP10.1□□□□□ -0.79
CAPN1-225ENST00000533704 TPSB2P20231 275 aa10.1□□□□□ -0.79
CAPN1-225ENST00000533704 RPS15P62841 145 aaKnown RBP10.1□□□□□ -0.79
CAPN1-225ENST00000533704 SARNPP82979 210 aaKnown RBP10.1□□□□□ -0.79
CAPN1-225ENST00000533704 PLOD1Q02809 727 aaPredicted RBP10.1□□□□□ -0.79
CAPN1-225ENST00000533704 TPSAB1Q15661 275 aa10.1□□□□□ -0.79
CAPN1-225ENST00000533704 TTC27Q6P3X3 843 aa10.1□□□□□ -0.79
CAPN1-225ENST00000533704 LRRC8BQ6P9F7 803 aa10.1□□□□□ -0.79
CAPN1-225ENST00000533704 FAM20CQ8IXL6 584 aa10.1□□□□□ -0.79
CAPN1-225ENST00000533704 SLC22A15Q8IZD6 547 aa10.1□□□□□ -0.79
CAPN1-225ENST00000533704 LMNTD1Q8N9Z9 388 aa10.1□□□□□ -0.79
CAPN1-225ENST00000533704 SLC38A9Q8NBW4 561 aa10.1□□□□□ -0.79
CAPN1-225ENST00000533704 ASZ1Q8WWH4 475 aa10.1□□□□□ -0.79
CAPN1-225ENST00000533704 PEX13Q92968 403 aa10.1□□□□□ -0.79
CAPN1-225ENST00000533704 MAGOHBQ96A72 148 aaKnown RBP10.1□□□□□ -0.79
CAPN1-225ENST00000533704 FAM136AQ96C01 138 aa10.1□□□□□ -0.79
CAPN1-225ENST00000533704 MFSD3Q96ES6 412 aa10.1□□□□□ -0.79
CAPN1-225ENST00000533704 CARD6Q9BX69 1037 aa10.1□□□□□ -0.79
CAPN1-225ENST00000533704 PITPNM3Q9BZ71 974 aa10.1□□□□□ -0.79
CAPN1-225ENST00000533704 CHST8Q9H2A9 424 aa10.1□□□□□ -0.79
CAPN1-225ENST00000533704 ACTR5Q9H9F9 607 aaPredicted RBP10.1□□□□□ -0.79
CAPN1-225ENST00000533704 GRPEL1Q9HAV7 217 aa10.1□□□□□ -0.79
CAPN1-225ENST00000533704 TREX1Q9NSU2 369 aa10.1□□□□□ -0.79
CAPN1-225ENST00000533704 GNPTGQ9UJJ9 305 aa10.1□□□□□ -0.79
CAPN1-225ENST00000533704 SERTAD3Q9UJW9 196 aa10.1□□□□□ -0.79
CAPN1-225ENST00000533704 MAN2B2Q9Y2E5 1009 aa10.1□□□□□ -0.79
CAPN1-225ENST00000533704 MYO18BQ8IUG5 2567 aa10.09□□□□□ -0.79
CAPN1-225ENST00000533704 E7EQ34 232 aa10.09□□□□□ -0.79
CAPN1-225ENST00000533704 GOLGA8MH3BSY2 632 aa10.09□□□□□ -0.79
CAPN1-225ENST00000533704 MEN1O00255 615 aa10.09□□□□□ -0.79
CAPN1-225ENST00000533704 AVILO75366 819 aa10.09□□□□□ -0.79
CAPN1-225ENST00000533704 RPN2P04844 631 aa10.09□□□□□ -0.79
CAPN1-225ENST00000533704 TPBGLP0DKB5 382 aa10.09□□□□□ -0.79
CAPN1-225ENST00000533704 PTPN4P29074 926 aa10.09□□□□□ -0.79
CAPN1-225ENST00000533704 FMO4P31512 558 aa10.09□□□□□ -0.79
CAPN1-225ENST00000533704 ITGA1P56199 1179 aa10.09□□□□□ -0.79
CAPN1-225ENST00000533704 PTCHD3Q3KNS1 767 aa10.09□□□□□ -0.79
CAPN1-225ENST00000533704 DNAJC21Q5F1R6 531 aaKnown RBP10.09□□□□□ -0.79
CAPN1-225ENST00000533704 COLEC12Q5KU26 742 aa10.09□□□□□ -0.79
CAPN1-225ENST00000533704 PLEKHS1Q5SXH7 462 aa10.09□□□□□ -0.79
CAPN1-225ENST00000533704 ANKRD22Q5VYY1 191 aa10.09□□□□□ -0.79
CAPN1-225ENST00000533704 MRNIPQ6NTE8 343 aa10.09□□□□□ -0.79
CAPN1-225ENST00000533704 ATG14Q6ZNE5 492 aa10.09□□□□□ -0.79
CAPN1-225ENST00000533704 CDHR3Q6ZTQ4 885 aa10.09□□□□□ -0.79
CAPN1-225ENST00000533704 OTOAQ7RTW8 1153 aa10.09□□□□□ -0.79
CAPN1-225ENST00000533704 SDCCAG8Q86SQ7 713 aaPredicted RBP10.09□□□□□ -0.79
CAPN1-225ENST00000533704 GPR135Q8IZ08 494 aa10.09□□□□□ -0.79
CAPN1-225ENST00000533704 SLC35F6Q8N357 371 aa10.09□□□□□ -0.79
CAPN1-225ENST00000533704 MPP5Q8N3R9 675 aa10.09□□□□□ -0.79
CAPN1-225ENST00000533704 C19orf47Q8N9M1 422 aaKnown RBP10.09□□□□□ -0.79
CAPN1-225ENST00000533704 ABHD17AQ96GS6 310 aa10.09□□□□□ -0.79
CAPN1-225ENST00000533704 SGSM3Q96HU1 749 aa10.09□□□□□ -0.79
CAPN1-225ENST00000533704 PBKQ96KB5 322 aa10.09□□□□□ -0.79
CAPN1-225ENST00000533704 IL17FQ96PD4 163 aa10.09□□□□□ -0.79
CAPN1-225ENST00000533704 PANX3Q96QZ0 392 aa10.09□□□□□ -0.79
CAPN1-225ENST00000533704 OR2A14Q96R47 310 aa10.09□□□□□ -0.79
CAPN1-225ENST00000533704 SYTL2Q9HCH5 934 aa10.09□□□□□ -0.79
CAPN1-225ENST00000533704 FAM60AQ9NP50 221 aa10.09□□□□□ -0.79
CAPN1-225ENST00000533704 LATS2Q9NRM7 1088 aa10.09□□□□□ -0.79
CAPN1-225ENST00000533704 OR6C2Q9NZP2 312 aa10.09□□□□□ -0.79
CAPN1-225ENST00000533704 SAMD15Q9P1V8 674 aa10.09□□□□□ -0.79
CAPN1-225ENST00000533704 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.09□□□□□ -0.79
CAPN1-225ENST00000533704 SOX13Q9UN79 622 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms