RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 HBQ1P09105 142 aa17.23■□□□□ 0.35
PCF11-206ENST00000533018 UGT2B7P16662 529 aa17.23■□□□□ 0.35
PCF11-206ENST00000533018 ZNF789Q5FWF6 425 aa17.23■□□□□ 0.35
PCF11-206ENST00000533018 SEL1L2Q5TEA6 688 aa17.23■□□□□ 0.35
PCF11-206ENST00000533018 LYPLAL1Q5VWZ2 237 aa17.23■□□□□ 0.35
PCF11-206ENST00000533018 TBC1D21Q8IYX1 336 aa17.23■□□□□ 0.35
PCF11-206ENST00000533018 C19orf47Q8N9M1 422 aaKnown RBP17.23■□□□□ 0.35
PCF11-206ENST00000533018 SPC24Q8NBT2 197 aa17.23■□□□□ 0.35
PCF11-206ENST00000533018 OR6P1Q8NGX9 317 aa17.23■□□□□ 0.35
PCF11-206ENST00000533018 HDAC10Q969S8 669 aa17.23■□□□□ 0.35
PCF11-206ENST00000533018 TCTN2Q96GX1 697 aa17.23■□□□□ 0.35
PCF11-206ENST00000533018 ETNK1Q9HBU6 452 aa17.23■□□□□ 0.35
PCF11-206ENST00000533018 PLAGL1Q9UM63 463 aa17.23■□□□□ 0.35
PCF11-206ENST00000533018 VPS4AQ9UN37 437 aa17.23■□□□□ 0.35
PCF11-206ENST00000533018 SNRNP200O75643 2136 aaKnown RBP17.23■□□□□ 0.35
PCF11-206ENST00000533018 ERI2A8K979 691 aaKnown RBP17.22■□□□□ 0.35
PCF11-206ENST00000533018 ISM1B1AKI9 464 aa17.22■□□□□ 0.35
PCF11-206ENST00000533018 F8W8V4 182 aa17.22■□□□□ 0.35
PCF11-206ENST00000533018 KDM1AO60341 852 aa17.22■□□□□ 0.35
PCF11-206ENST00000533018 OR1I1O60431 355 aa17.22■□□□□ 0.35
PCF11-206ENST00000533018 OR2B3O76000 313 aa17.22■□□□□ 0.35
PCF11-206ENST00000533018 GOT2P00505 430 aaKnown RBP17.22■□□□□ 0.35
PCF11-206ENST00000533018 CHRM5P08912 532 aaPredicted RBP17.22■□□□□ 0.35
PCF11-206ENST00000533018 MSL3P1P0C860 447 aa17.22■□□□□ 0.35
PCF11-206ENST00000533018 FOXN2P32314 431 aa17.22■□□□□ 0.35
PCF11-206ENST00000533018 FDFT1P37268 417 aa17.22■□□□□ 0.35
PCF11-206ENST00000533018 PLOD1Q02809 727 aaPredicted RBP17.22■□□□□ 0.35
PCF11-206ENST00000533018 DEFB110Q30KQ9 67 aa17.22■□□□□ 0.35
PCF11-206ENST00000533018 MLIPQ5VWP3 458 aa17.22■□□□□ 0.35
PCF11-206ENST00000533018 PACS1Q6VY07 963 aa17.22■□□□□ 0.35
PCF11-206ENST00000533018 TMEM139Q8IV31 216 aa17.22■□□□□ 0.35
PCF11-206ENST00000533018 FAM26EQ8N5C1 309 aa17.22■□□□□ 0.35
PCF11-206ENST00000533018 OR13J1Q8NGT2 312 aa17.22■□□□□ 0.35
PCF11-206ENST00000533018 OR5K2Q8NHB8 316 aa17.22■□□□□ 0.35
PCF11-206ENST00000533018 OR2A14Q96R47 310 aa17.22■□□□□ 0.35
PCF11-206ENST00000533018 DPH2Q9BQC3 489 aaPredicted RBP17.22■□□□□ 0.35
PCF11-206ENST00000533018 FAM60AQ9NP50 221 aa17.22■□□□□ 0.35
PCF11-206ENST00000533018 SPHK1Q9NYA1 384 aa17.22■□□□□ 0.35
PCF11-206ENST00000533018 SLC2A6Q9UGQ3 507 aa17.22■□□□□ 0.35
PCF11-206ENST00000533018 GPN3Q9UHW5 284 aaPredicted RBP17.22■□□□□ 0.35
PCF11-206ENST00000533018 PADI2Q9Y2J8 665 aa17.22■□□□□ 0.35
PCF11-206ENST00000533018 PCDHGA9Q9Y5G4 932 aaKnown RBP17.22■□□□□ 0.35
PCF11-206ENST00000533018 CAPN6Q9Y6Q1 641 aa17.22■□□□□ 0.35
PCF11-206ENST00000533018 LIASO43766 372 aa17.21■□□□□ 0.35
PCF11-206ENST00000533018 ACADLP28330 430 aa17.21■□□□□ 0.35
PCF11-206ENST00000533018 OTX2P32243 289 aa17.21■□□□□ 0.35
PCF11-206ENST00000533018 PRAMEP78395 509 aa17.21■□□□□ 0.35
PCF11-206ENST00000533018 SNX1Q13596 522 aa17.21■□□□□ 0.35
PCF11-206ENST00000533018 NCF4Q15080 339 aa17.21■□□□□ 0.35
PCF11-206ENST00000533018 NADK2Q4G0N4 442 aa17.21■□□□□ 0.35
PCF11-206ENST00000533018 FASTKD1Q53R41 847 aaKnown RBP17.21■□□□□ 0.35
PCF11-206ENST00000533018 TSTD2Q5T7W7 516 aa17.21■□□□□ 0.35
PCF11-206ENST00000533018 C1orf189Q5VU69 101 aa17.21■□□□□ 0.35
PCF11-206ENST00000533018 AFTPHQ6ULP2 937 aa17.21■□□□□ 0.35
PCF11-206ENST00000533018 FAM198BQ6UWH4 519 aa17.21■□□□□ 0.35
PCF11-206ENST00000533018 OR4L1Q8NH43 312 aa17.21■□□□□ 0.35
PCF11-206ENST00000533018 ADAMTS17Q8TE56 1095 aa17.21■□□□□ 0.35
PCF11-206ENST00000533018 C1orf54Q8WWF1 131 aa17.21■□□□□ 0.35
PCF11-206ENST00000533018 OR6C2Q9NZP2 312 aa17.21■□□□□ 0.35
PCF11-206ENST00000533018 ZNF451Q9Y4E5 1061 aa17.21■□□□□ 0.35
PCF11-206ENST00000533018 AP1M2Q9Y6Q5 423 aa17.21■□□□□ 0.35
PCF11-206ENST00000533018 USP9XQ93008 2570 aaPredicted RBP17.2■□□□□ 0.34
PCF11-206ENST00000533018 A0A0J9YY10 115 aa17.2■□□□□ 0.34
PCF11-206ENST00000533018 SLC5A10A0PJK1 596 aa17.2■□□□□ 0.34
PCF11-206ENST00000533018 BHMG1C9JSJ3 638 aaPredicted RBP17.2■□□□□ 0.34
PCF11-206ENST00000533018 CAPN1P07384 714 aa17.2■□□□□ 0.34
PCF11-206ENST00000533018 ADRA1DP25100 572 aa17.2■□□□□ 0.34
PCF11-206ENST00000533018 PPARGP37231 505 aaPredicted RBP17.2■□□□□ 0.34
PCF11-206ENST00000533018 GRIA1P42261 906 aa17.2■□□□□ 0.34
PCF11-206ENST00000533018 CD97P48960 835 aa17.2■□□□□ 0.34
PCF11-206ENST00000533018 RRADP55042 308 aa17.2■□□□□ 0.34
PCF11-206ENST00000533018 HSPA14Q0VDF9 509 aa17.2■□□□□ 0.34
PCF11-206ENST00000533018 ZIC1Q15915 447 aa17.2■□□□□ 0.34
PCF11-206ENST00000533018 MED25Q71SY5 747 aa17.2■□□□□ 0.34
PCF11-206ENST00000533018 PRUNE1Q86TP1 453 aa17.2■□□□□ 0.34
PCF11-206ENST00000533018 RAB43Q86YS6 212 aa17.2■□□□□ 0.34
PCF11-206ENST00000533018 RNF10Q8N5U6 811 aaKnown RBP17.2■□□□□ 0.34
PCF11-206ENST00000533018 ZBTB2Q8N680 514 aa17.2■□□□□ 0.34
PCF11-206ENST00000533018 CCDC89Q8N998 374 aa17.2■□□□□ 0.34
PCF11-206ENST00000533018 TMEM102Q8N9M5 508 aaPredicted RBP17.2■□□□□ 0.34
PCF11-206ENST00000533018 FDCSPQ8NFU4 85 aa17.2■□□□□ 0.34
PCF11-206ENST00000533018 CFAP61Q8NHU2 1237 aa17.2■□□□□ 0.34
PCF11-206ENST00000533018 CPT1CQ8TCG5 803 aa17.2■□□□□ 0.34
PCF11-206ENST00000533018 C17orf62Q9BQA9 187 aa17.2■□□□□ 0.34
PCF11-206ENST00000533018 TSSK1BQ9BXA7 367 aa17.2■□□□□ 0.34
PCF11-206ENST00000533018 SPRTNQ9H040 489 aaPredicted RBP17.2■□□□□ 0.34
PCF11-206ENST00000533018 RAB6BQ9NRW1 208 aa17.2■□□□□ 0.34
PCF11-206ENST00000533018 TXLNGQ9NUQ3 528 aa17.2■□□□□ 0.34
PCF11-206ENST00000533018 MAP10Q9P2G4 905 aa17.2■□□□□ 0.34
PCF11-206ENST00000533018 ANAPC5Q9UJX4 755 aa17.2■□□□□ 0.34
PCF11-206ENST00000533018 GUCA1BQ9UMX6 200 aa17.2■□□□□ 0.34
PCF11-206ENST00000533018 FER1L5A0AVI2 2057 aa17.2■□□□□ 0.34
PCF11-206ENST00000533018 USP9YO00507 2555 aaPredicted RBP17.19■□□□□ 0.34
PCF11-206ENST00000533018 APRTP07741 180 aa17.19■□□□□ 0.34
PCF11-206ENST00000533018 CBSLP0DN79 551 aa17.19■□□□□ 0.34
PCF11-206ENST00000533018 ETS1P14921 441 aa17.19■□□□□ 0.34
PCF11-206ENST00000533018 PSMA3P25788 255 aa17.19■□□□□ 0.34
PCF11-206ENST00000533018 CBSP35520 551 aa17.19■□□□□ 0.34
PCF11-206ENST00000533018 SRSF1Q07955 248 aaKnown RBP eCLIP17.19■□□□□ 0.346e-9■■■□□ 15.3
PCF11-206ENST00000533018 RAPSNQ13702 412 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms