RNA–Protein interactions for RNA: ENST00000532451.1

SORL1-210, Transcript of sortilin related receptor 1, humanhuman

TSL 1 (best)

Gene SORL1, Length 2,165 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-210ENST00000532451 A0A1W2PQ67 120 aa23.04■■□□□ 1.28
SORL1-210ENST00000532451 NEDD8-MDP1E9PL57 170 aa23.04■■□□□ 1.28
SORL1-210ENST00000532451 MT-ND1P03886 318 aa23.04■■□□□ 1.28
SORL1-210ENST00000532451 IL6P05231 212 aa23.04■■□□□ 1.28
SORL1-210ENST00000532451 C8GP07360 202 aa23.04■■□□□ 1.28
SORL1-210ENST00000532451 ANXA6P08133 673 aa23.04■■□□□ 1.28
SORL1-210ENST00000532451 GNAO1P09471 354 aa23.04■■□□□ 1.28
SORL1-210ENST00000532451 PABPC1P11940 636 aaKnown RBP23.04■■□□□ 1.28
SORL1-210ENST00000532451 HSPA14Q0VDF9 509 aa23.04■■□□□ 1.28
SORL1-210ENST00000532451 MAPKAPK3Q16644 382 aa23.04■■□□□ 1.28
SORL1-210ENST00000532451 SPANXN4Q5MJ08 99 aa23.04■■□□□ 1.28
SORL1-210ENST00000532451 DET1Q7L5Y6 550 aa23.04■■□□□ 1.28
SORL1-210ENST00000532451 RIMKLAQ8IXN7 391 aa23.04■■□□□ 1.28
SORL1-210ENST00000532451 TCAIMQ8N3R3 496 aa23.04■■□□□ 1.28
SORL1-210ENST00000532451 AADATQ8N5Z0 425 aa23.04■■□□□ 1.28
SORL1-210ENST00000532451 ZNF583Q96ND8 569 aa23.04■■□□□ 1.28
SORL1-210ENST00000532451 PARVBQ9HBI1 364 aa23.04■■□□□ 1.28
SORL1-210ENST00000532451 MBD1Q9UIS9 605 aaPredicted RBP23.04■■□□□ 1.28
SORL1-210ENST00000532451 TULP3O75386 442 aa23.03■■□□□ 1.28
SORL1-210ENST00000532451 ACRP10323 421 aa23.03■■□□□ 1.28
SORL1-210ENST00000532451 CPSF6Q16630 551 aaKnown RBP eCLIP23.03■■□□□ 1.28
SORL1-210ENST00000532451 USP39Q53GS9 565 aaKnown RBP23.03■■□□□ 1.28
SORL1-210ENST00000532451 MTFMTQ96DP5 389 aaKnown RBP23.03■■□□□ 1.28
SORL1-210ENST00000532451 CCDC115Q96NT0 180 aa23.03■■□□□ 1.28
SORL1-210ENST00000532451 ACPTQ9BZG2 426 aa23.03■■□□□ 1.28
SORL1-210ENST00000532451 CD84Q9UIB8 345 aa23.03■■□□□ 1.28
SORL1-210ENST00000532451 ZNF639Q9UID6 485 aa23.03■■□□□ 1.28
SORL1-210ENST00000532451 NUAK1O60285 661 aa23.03■■□□□ 1.28
SORL1-210ENST00000532451 PGRP06401 933 aa23.03■■□□□ 1.28
SORL1-210ENST00000532451 TUBA4AP68366 448 aa23.03■■□□□ 1.28
SORL1-210ENST00000532451 GDPD4Q6W3E5 623 aa23.03■■□□□ 1.28
SORL1-210ENST00000532451 KRTCAP2Q8N6L1 136 aa23.03■■□□□ 1.28
SORL1-210ENST00000532451 BDH2Q9BUT1 245 aa23.03■■□□□ 1.28
SORL1-210ENST00000532451 BBS2Q9BXC9 721 aa23.03■■□□□ 1.28
SORL1-210ENST00000532451 PKD2L2Q9NZM6 624 aa23.03■■□□□ 1.28
SORL1-210ENST00000532451 NIPSNAP3AQ9UFN0 247 aaPredicted RBP23.03■■□□□ 1.28
SORL1-210ENST00000532451 HELZP42694 1942 aaKnown RBP23.02■■□□□ 1.28
SORL1-210ENST00000532451 TIMP1P01033 207 aa23.02■■□□□ 1.28
SORL1-210ENST00000532451 PDYNP01213 254 aa23.02■■□□□ 1.28
SORL1-210ENST00000532451 MPC1LP0DKB6 136 aa23.02■■□□□ 1.28
SORL1-210ENST00000532451 ATP1B2P14415 290 aaPredicted RBP23.02■■□□□ 1.28
SORL1-210ENST00000532451 POLR2LP62875 67 aaKnown RBP23.02■■□□□ 1.28
SORL1-210ENST00000532451 CYP4F3Q08477 520 aa23.02■■□□□ 1.28
SORL1-210ENST00000532451 DYNC1I2Q13409 638 aaKnown RBP23.02■■□□□ 1.28
SORL1-210ENST00000532451 PYCR3Q53H96 274 aa23.02■■□□□ 1.28
SORL1-210ENST00000532451 B3GNT6Q6ZMB0 384 aa23.02■■□□□ 1.28
SORL1-210ENST00000532451 ITFG1Q8TB96 612 aa23.02■■□□□ 1.28
SORL1-210ENST00000532451 SKA2Q8WVK7 121 aaPredicted RBP23.02■■□□□ 1.28
SORL1-210ENST00000532451 ASB11Q8WXH4 323 aa23.02■■□□□ 1.28
SORL1-210ENST00000532451 VPS50Q96JG6 964 aa23.02■■□□□ 1.28
SORL1-210ENST00000532451 CD320Q9NPF0 282 aa23.02■■□□□ 1.28
SORL1-210ENST00000532451 SMPD3Q9NY59 655 aaPredicted RBP23.02■■□□□ 1.28
SORL1-210ENST00000532451 PCDH10Q9P2E7 1040 aa23.02■■□□□ 1.28
SORL1-210ENST00000532451 GMNNO75496 209 aa23.01■■□□□ 1.27
SORL1-210ENST00000532451 HIST1H2AGP0C0S8 130 aaPredicted RBP23.01■■□□□ 1.27
SORL1-210ENST00000532451 LINC00271P0C7V0 271 aa23.01■■□□□ 1.27
SORL1-210ENST00000532451 BCKDHAP12694 445 aa23.01■■□□□ 1.27
SORL1-210ENST00000532451 HIST1H2ADP20671 130 aa23.01■■□□□ 1.27
SORL1-210ENST00000532451 RPS9P46781 194 aaKnown RBP23.01■■□□□ 1.27
SORL1-210ENST00000532451 ALDH3B2P48448 385 aa23.01■■□□□ 1.27
SORL1-210ENST00000532451 ZXDCQ2QGD7 858 aaPredicted RBP23.01■■□□□ 1.27
SORL1-210ENST00000532451 GGTA1PQ4G0N0 100 aa23.01■■□□□ 1.27
SORL1-210ENST00000532451 KCTD21Q4G0X4 260 aa23.01■■□□□ 1.27
SORL1-210ENST00000532451 KLHL23Q8NBE8 558 aa23.01■■□□□ 1.27
SORL1-210ENST00000532451 OR2T12Q8NG77 320 aa23.01■■□□□ 1.27
SORL1-210ENST00000532451 CYGBQ8WWM9 190 aa23.01■■□□□ 1.27
SORL1-210ENST00000532451 TCEAL4Q96EI5 215 aa23.01■■□□□ 1.27
SORL1-210ENST00000532451 HIST1H2AHQ96KK5 128 aa23.01■■□□□ 1.27
SORL1-210ENST00000532451 HIST1H2AJQ99878 128 aa23.01■■□□□ 1.27
SORL1-210ENST00000532451 SH3GL3Q99963 347 aa23.01■■□□□ 1.27
SORL1-210ENST00000532451 H2AFJQ9BTM1 129 aa23.01■■□□□ 1.27
SORL1-210ENST00000532451 WASH3PC4AMC7 463 aa23.01■■□□□ 1.27
SORL1-210ENST00000532451 CLOCKO15516 846 aa23.01■■□□□ 1.27
SORL1-210ENST00000532451 NFKBIAP25963 317 aa23.01■■□□□ 1.27
SORL1-210ENST00000532451 SLC6A12P48065 614 aa23.01■■□□□ 1.27
SORL1-210ENST00000532451 VRK3Q8IV63 474 aa23.01■■□□□ 1.27
SORL1-210ENST00000532451 MSRB3Q8IXL7 192 aa23.01■■□□□ 1.27
SORL1-210ENST00000532451 TNIP2Q8NFZ5 429 aa23.01■■□□□ 1.27
SORL1-210ENST00000532451 SELENOMQ8WWX9 145 aa23.01■■□□□ 1.27
SORL1-210ENST00000532451 THUMPD3Q9BV44 507 aaKnown RBP23.01■■□□□ 1.27
SORL1-210ENST00000532451 GORASP2Q9H8Y8 452 aa23.01■■□□□ 1.27
SORL1-210ENST00000532451 KCNE1BA0A087WTH5 132 aa23■■□□□ 1.27
SORL1-210ENST00000532451 RAP2AP10114 183 aa23■■□□□ 1.27
SORL1-210ENST00000532451 HNMTP50135 292 aa23■■□□□ 1.27
SORL1-210ENST00000532451 BOP1Q14137 746 aaKnown RBP23■■□□□ 1.27
SORL1-210ENST00000532451 PLEKHS1Q5SXH7 462 aa23■■□□□ 1.27
SORL1-210ENST00000532451 TTC33Q6PID6 262 aaPredicted RBP23■■□□□ 1.27
SORL1-210ENST00000532451 ZNF548Q8NEK5 533 aaPredicted RBP23■■□□□ 1.27
SORL1-210ENST00000532451 OR2A12Q8NGT7 310 aa23■■□□□ 1.27
SORL1-210ENST00000532451 CLHC1Q8NHS4 586 aa23■■□□□ 1.27
SORL1-210ENST00000532451 MAGEE2Q8TD90 523 aaPredicted RBP23■■□□□ 1.27
SORL1-210ENST00000532451 IRF7Q92985 503 aa23■■□□□ 1.27
SORL1-210ENST00000532451 SLC25A37Q9NYZ2 338 aa23■■□□□ 1.27
SORL1-210ENST00000532451 THEGQ9P2T0 379 aa23■■□□□ 1.27
SORL1-210ENST00000532451 SNX6Q9UNH7 406 aa23■■□□□ 1.27
SORL1-210ENST00000532451 CEPT1Q9Y6K0 416 aa23■■□□□ 1.27
SORL1-210ENST00000532451 TRIM43BA6NCK2 446 aa23■■□□□ 1.27
SORL1-210ENST00000532451 PABPN1LA6NDY0 278 aaKnown RBP23■■□□□ 1.27
SORL1-210ENST00000532451 CAPGP40121 348 aa23■■□□□ 1.27
SORL1-210ENST00000532451 RPS14P62263 151 aaKnown RBP23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms