RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 FGFRL1Q8N441 504 aa3.49□□□□□ -1.85
PTPRK-220ENST00000531466 ARHGAP45Q92619 1136 aa3.49□□□□□ -1.85
PTPRK-220ENST00000531466 HVCN1Q96D96 273 aa3.49□□□□□ -1.85
PTPRK-220ENST00000531466 PIP5K1AQ99755 562 aa3.49□□□□□ -1.85
PTPRK-220ENST00000531466 CRYL1Q9Y2S2 319 aa3.49□□□□□ -1.85
PTPRK-220ENST00000531466 J3KRW8 73 aa3.48□□□□□ -1.85
PTPRK-220ENST00000531466 SMAD9O15198 467 aaKnown RBP3.48□□□□□ -1.85
PTPRK-220ENST00000531466 HTATSF1O43719 755 aaKnown RBP3.48□□□□□ -1.85
PTPRK-220ENST00000531466 TPPPO94811 219 aa3.48□□□□□ -1.85
PTPRK-220ENST00000531466 IPO7O95373 1038 aaKnown RBP3.48□□□□□ -1.85
PTPRK-220ENST00000531466 KIF5BP33176 963 aa3.48□□□□□ -1.85
PTPRK-220ENST00000531466 SH3BGRP55822 239 aaPredicted RBP3.48□□□□□ -1.85
PTPRK-220ENST00000531466 NUCB1Q02818 461 aa3.48□□□□□ -1.85
PTPRK-220ENST00000531466 CEBPZQ03701 1054 aaKnown RBP3.48□□□□□ -1.85
PTPRK-220ENST00000531466 ZFP36L1Q07352 338 aaKnown RBP3.48□□□□□ -1.85
PTPRK-220ENST00000531466 LY6DQ14210 128 aa3.48□□□□□ -1.85
PTPRK-220ENST00000531466 FAM198BQ6UWH4 519 aa3.48□□□□□ -1.85
PTPRK-220ENST00000531466 SLC47A2Q86VL8 602 aa3.48□□□□□ -1.85
PTPRK-220ENST00000531466 N4BP2L2Q92802 583 aaPredicted RBP3.48□□□□□ -1.85
PTPRK-220ENST00000531466 RFT1Q96AA3 541 aa3.48□□□□□ -1.85
PTPRK-220ENST00000531466 GAL3ST4Q96RP7 486 aa3.48□□□□□ -1.85
PTPRK-220ENST00000531466 SEPT5Q99719 369 aaPredicted RBP3.48□□□□□ -1.85
PTPRK-220ENST00000531466 CCDC94Q9BW85 323 aaPredicted RBP3.48□□□□□ -1.85
PTPRK-220ENST00000531466 A4GALTQ9NPC4 353 aa3.48□□□□□ -1.85
PTPRK-220ENST00000531466 TRMT1Q9NXH9 659 aaKnown RBP3.48□□□□□ -1.85
PTPRK-220ENST00000531466 XPO7Q9UIA9 1087 aaKnown RBP3.48□□□□□ -1.85
PTPRK-220ENST00000531466 DBNLQ9UJU6 430 aaKnown RBP3.48□□□□□ -1.85
PTPRK-220ENST00000531466 SPIN1Q9Y657 262 aaPredicted RBP3.48□□□□□ -1.85
PTPRK-220ENST00000531466 ARHGEF40Q8TER5 1519 aa3.48□□□□□ -1.85
PTPRK-220ENST00000531466 DCAF1Q9Y4B6 1507 aa3.48□□□□□ -1.85
PTPRK-220ENST00000531466 ACOD1A6NK06 481 aa3.47□□□□□ -1.85
PTPRK-220ENST00000531466 MPHOSPH10O00566 681 aaKnown RBP3.47□□□□□ -1.85
PTPRK-220ENST00000531466 CPLX1O14810 134 aa3.47□□□□□ -1.85
PTPRK-220ENST00000531466 DAB1O75553 588 aa3.47□□□□□ -1.85
PTPRK-220ENST00000531466 HPRP00739 348 aa3.47□□□□□ -1.85
PTPRK-220ENST00000531466 XBP1P17861 261 aa3.47□□□□□ -1.85
PTPRK-220ENST00000531466 CYP2A7P20853 494 aa3.47□□□□□ -1.85
PTPRK-220ENST00000531466 CA4P22748 312 aa3.47□□□□□ -1.85
PTPRK-220ENST00000531466 ABCD3P28288 659 aa3.47□□□□□ -1.85
PTPRK-220ENST00000531466 OAS2P29728 719 aaKnown RBP3.47□□□□□ -1.85
PTPRK-220ENST00000531466 TSPAN7P41732 249 aa3.47□□□□□ -1.85
PTPRK-220ENST00000531466 HARS2P49590 506 aaKnown RBP3.47□□□□□ -1.85
PTPRK-220ENST00000531466 OLR1P78380 273 aa3.47□□□□□ -1.85
PTPRK-220ENST00000531466 TRPC3Q13507 836 aa3.47□□□□□ -1.85
PTPRK-220ENST00000531466 ADIPOQQ15848 244 aa3.47□□□□□ -1.85
PTPRK-220ENST00000531466 MOGAT2Q3SYC2 334 aa3.47□□□□□ -1.85
PTPRK-220ENST00000531466 KLHL26Q53HC5 615 aa3.47□□□□□ -1.85
PTPRK-220ENST00000531466 SOWAHCQ53LP3 525 aaPredicted RBP3.47□□□□□ -1.85
PTPRK-220ENST00000531466 SPECC1Q5M775 1068 aa3.47□□□□□ -1.85
PTPRK-220ENST00000531466 CFAP161Q6P656 301 aa3.47□□□□□ -1.85
PTPRK-220ENST00000531466 CTR9Q6PD62 1173 aa3.47□□□□□ -1.85
PTPRK-220ENST00000531466 IQCF2Q8IXL9 164 aa3.47□□□□□ -1.85
PTPRK-220ENST00000531466 MARVELD2Q8N4S9 558 aa3.47□□□□□ -1.85
PTPRK-220ENST00000531466 TEX9Q8N6V9 391 aa3.47□□□□□ -1.85
PTPRK-220ENST00000531466 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.47□□□□□ -1.85
PTPRK-220ENST00000531466 TSPYL6Q8N831 410 aa3.47□□□□□ -1.85
PTPRK-220ENST00000531466 CCDC191Q8NCU4 936 aa3.47□□□□□ -1.85
PTPRK-220ENST00000531466 AFAP1L1Q8TED9 768 aa3.47□□□□□ -1.85
PTPRK-220ENST00000531466 SMAP2Q8WU79 429 aaPredicted RBP3.47□□□□□ -1.85
PTPRK-220ENST00000531466 SMARCE1Q969G3 411 aa3.47□□□□□ -1.85
PTPRK-220ENST00000531466 TBC1D31Q96DN5 1066 aa3.47□□□□□ -1.85
PTPRK-220ENST00000531466 SEC62Q99442 399 aaKnown RBP3.47□□□□□ -1.85
PTPRK-220ENST00000531466 UBN1Q9NPG3 1134 aa3.47□□□□□ -1.85
PTPRK-220ENST00000531466 GGA3Q9NZ52 723 aa3.47□□□□□ -1.85
PTPRK-220ENST00000531466 CPSF2Q9P2I0 782 aaKnown RBP3.47□□□□□ -1.85
PTPRK-220ENST00000531466 EPS15L1Q9UBC2 864 aa3.47□□□□□ -1.85
PTPRK-220ENST00000531466 TTLL3Q9Y4R7 772 aa3.47□□□□□ -1.85
PTPRK-220ENST00000531466 ITIH6Q6UXX5 1313 aa3.46□□□□□ -1.85
PTPRK-220ENST00000531466 TMEM110-MUSTN1A8MSY1 372 aa3.46□□□□□ -1.86
PTPRK-220ENST00000531466 PRKRAO75569 313 aaKnown RBP3.46□□□□□ -1.86
PTPRK-220ENST00000531466 BAIAP3O94812 1187 aa3.46□□□□□ -1.86
PTPRK-220ENST00000531466 KIAA0754O94854 1291 aa3.46□□□□□ -1.86
PTPRK-220ENST00000531466 BAG2O95816 211 aa3.46□□□□□ -1.86
PTPRK-220ENST00000531466 POLBP06746 335 aa3.46□□□□□ -1.86
PTPRK-220ENST00000531466 ZBTB25P24278 435 aa3.46□□□□□ -1.86
PTPRK-220ENST00000531466 ICAM3P32942 547 aa3.46□□□□□ -1.86
PTPRK-220ENST00000531466 MSH2P43246 934 aa3.46□□□□□ -1.86
PTPRK-220ENST00000531466 LEPRP48357 1165 aaKnown RBP3.46□□□□□ -1.86
PTPRK-220ENST00000531466 PRKCZQ05513 592 aa3.46□□□□□ -1.86
PTPRK-220ENST00000531466 SLMAPQ14BN4 828 aa3.46□□□□□ -1.86
PTPRK-220ENST00000531466 TOMM20Q15388 145 aa3.46□□□□□ -1.86
PTPRK-220ENST00000531466 NAB2Q15742 525 aa3.46□□□□□ -1.86
PTPRK-220ENST00000531466 SLC9C2Q5TAH2 1124 aa3.46□□□□□ -1.86
PTPRK-220ENST00000531466 ADALQ6DHV7 355 aa3.46□□□□□ -1.86
PTPRK-220ENST00000531466 FAM166AQ6J272 317 aa3.46□□□□□ -1.86
PTPRK-220ENST00000531466 MTERF4Q7Z6M4 381 aaKnown RBP3.46□□□□□ -1.86
PTPRK-220ENST00000531466 KCNMB4Q86W47 210 aa3.46□□□□□ -1.86
PTPRK-220ENST00000531466 MARCH9Q86YJ5 346 aa3.46□□□□□ -1.86
PTPRK-220ENST00000531466 RNF168Q8IYW5 571 aaPredicted RBP3.46□□□□□ -1.86
PTPRK-220ENST00000531466 CCAR2Q8N163 923 aaKnown RBP3.46□□□□□ -1.86
PTPRK-220ENST00000531466 ESX1Q8N693 406 aa3.46□□□□□ -1.86
PTPRK-220ENST00000531466 NIPA2Q8N8Q9 360 aa3.46□□□□□ -1.86
PTPRK-220ENST00000531466 INTS12Q96CB8 462 aaKnown RBP3.46□□□□□ -1.86
PTPRK-220ENST00000531466 ARSGQ96EG1 525 aa3.46□□□□□ -1.86
PTPRK-220ENST00000531466 VMP1Q96GC9 406 aa3.46□□□□□ -1.86
PTPRK-220ENST00000531466 LINC00167Q96N53 147 aa3.46□□□□□ -1.86
PTPRK-220ENST00000531466 PITPNM3Q9BZ71 974 aa3.46□□□□□ -1.86
PTPRK-220ENST00000531466 XPO4Q9C0E2 1151 aaKnown RBP3.46□□□□□ -1.86
PTPRK-220ENST00000531466 JMJD4Q9H9V9 463 aa3.46□□□□□ -1.86
PTPRK-220ENST00000531466 DIAPH3Q9NSV4 1193 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms