RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 DIDO1Q9BTC0 2240 aaKnown RBP17.81■□□□□ 0.44
SSSCA1-206ENST00000531405 SVILO95425 2214 aa17.8■□□□□ 0.44
SSSCA1-206ENST00000531405 CCDC78A2IDD5 438 aa17.8■□□□□ 0.44
SSSCA1-206ENST00000531405 H3BMH7 237 aa17.8■□□□□ 0.44
SSSCA1-206ENST00000531405 OR2B3O76000 313 aa17.8■□□□□ 0.44
SSSCA1-206ENST00000531405 HBQ1P09105 142 aa17.8■□□□□ 0.44
SSSCA1-206ENST00000531405 RPA4Q13156 261 aa17.8■□□□□ 0.44
SSSCA1-206ENST00000531405 BRD3Q15059 726 aa17.8■□□□□ 0.44
SSSCA1-206ENST00000531405 NR6A1Q15406 480 aa17.8■□□□□ 0.44
SSSCA1-206ENST00000531405 DBN1Q16643 649 aa17.8■□□□□ 0.44
SSSCA1-206ENST00000531405 VWA5B1Q5TIE3 1220 aa17.8■□□□□ 0.44
SSSCA1-206ENST00000531405 ZNF449Q6P9G9 518 aa17.8■□□□□ 0.44
SSSCA1-206ENST00000531405 NAPRTQ6XQN6 538 aa17.8■□□□□ 0.44
SSSCA1-206ENST00000531405 UNC5AQ6ZN44 842 aa17.8■□□□□ 0.44
SSSCA1-206ENST00000531405 HOOK3Q86VS8 718 aa17.8■□□□□ 0.44
SSSCA1-206ENST00000531405 HPS6Q86YV9 775 aa17.8■□□□□ 0.44
SSSCA1-206ENST00000531405 SNRNP40Q96DI7 357 aaKnown RBP17.8■□□□□ 0.44
SSSCA1-206ENST00000531405 OR2A14Q96R47 310 aa17.8■□□□□ 0.44
SSSCA1-206ENST00000531405 DHRS4Q9BTZ2 278 aa17.8■□□□□ 0.44
SSSCA1-206ENST00000531405 NLE1Q9NVX2 485 aaPredicted RBP17.8■□□□□ 0.44
SSSCA1-206ENST00000531405 SPHK1Q9NYA1 384 aa17.8■□□□□ 0.44
SSSCA1-206ENST00000531405 CDYLQ9Y232 598 aa17.8■□□□□ 0.44
SSSCA1-206ENST00000531405 PTRH2Q9Y3E5 179 aaKnown RBP17.8■□□□□ 0.44
SSSCA1-206ENST00000531405 PCDHA3Q9Y5H8 950 aa17.8■□□□□ 0.44
SSSCA1-206ENST00000531405 PRSS21Q9Y6M0 314 aa17.8■□□□□ 0.44
SSSCA1-206ENST00000531405 ZGRF1Q86YA3 2104 aa17.8■□□□□ 0.44
SSSCA1-206ENST00000531405 COL8A1P27658 744 aa17.79■□□□□ 0.44
SSSCA1-206ENST00000531405 GABRA4P48169 554 aa17.79■□□□□ 0.44
SSSCA1-206ENST00000531405 POU6F1Q14863 301 aa17.79■□□□□ 0.44
SSSCA1-206ENST00000531405 FLVCR1-AS1Q8TAF5 88 aa17.79■□□□□ 0.44
SSSCA1-206ENST00000531405 C19orf43Q9BQ61 176 aa17.79■□□□□ 0.44
SSSCA1-206ENST00000531405 ASF1BQ9NVP2 202 aa17.79■□□□□ 0.44
SSSCA1-206ENST00000531405 SMARCAL1Q9NZC9 954 aa17.79■□□□□ 0.44
SSSCA1-206ENST00000531405 DHCR7Q9UBM7 475 aaKnown RBP17.79■□□□□ 0.44
SSSCA1-206ENST00000531405 GPN3Q9UHW5 284 aaPredicted RBP17.79■□□□□ 0.44
SSSCA1-206ENST00000531405 PLAGL1Q9UM63 463 aa17.79■□□□□ 0.44
SSSCA1-206ENST00000531405 EFR3BQ9Y2G0 817 aa17.79■□□□□ 0.44
SSSCA1-206ENST00000531405 TDRKHQ9Y2W6 561 aaKnown RBP17.79■□□□□ 0.44
SSSCA1-206ENST00000531405 RCCD1A6NED2 376 aa17.78■□□□□ 0.44
SSSCA1-206ENST00000531405 H7C0S8 307 aa17.78■□□□□ 0.44
SSSCA1-206ENST00000531405 CNOT3O75175 753 aaKnown RBP17.78■□□□□ 0.44
SSSCA1-206ENST00000531405 CHRM5P08912 532 aaPredicted RBP17.78■□□□□ 0.44
SSSCA1-206ENST00000531405 TPBGLP0DKB5 382 aa17.78■□□□□ 0.44
SSSCA1-206ENST00000531405 SHMT2P34897 504 aa17.78■□□□□ 0.44
SSSCA1-206ENST00000531405 PTPN7P35236 360 aa17.78■□□□□ 0.44
SSSCA1-206ENST00000531405 FOLR3P41439 243 aa17.78■□□□□ 0.44
SSSCA1-206ENST00000531405 CACNG1Q06432 222 aa17.78■□□□□ 0.44
SSSCA1-206ENST00000531405 SSPNQ14714 243 aa17.78■□□□□ 0.44
SSSCA1-206ENST00000531405 DCAF10Q5QP82 559 aa17.78■□□□□ 0.44
SSSCA1-206ENST00000531405 KCTD11Q693B1 232 aa17.78■□□□□ 0.44
SSSCA1-206ENST00000531405 RHBDD2Q6NTF9 364 aa17.78■□□□□ 0.44
SSSCA1-206ENST00000531405 KLHDC8BQ8IXV7 354 aa17.78■□□□□ 0.44
SSSCA1-206ENST00000531405 CISD2Q8N5K1 135 aaKnown RBP17.78■□□□□ 0.44
SSSCA1-206ENST00000531405 ZNF655Q8N720 491 aaPredicted RBP17.78■□□□□ 0.44
SSSCA1-206ENST00000531405 TCTN2Q96GX1 697 aa17.78■□□□□ 0.44
SSSCA1-206ENST00000531405 CDKN2AIPNLQ96HQ2 116 aa17.78■□□□□ 0.44
SSSCA1-206ENST00000531405 GBP5Q96PP8 586 aa17.78■□□□□ 0.44
SSSCA1-206ENST00000531405 TSPY26PQ9H489 355 aa17.78■□□□□ 0.44
SSSCA1-206ENST00000531405 C5AR2Q9P296 337 aa17.78■□□□□ 0.44
SSSCA1-206ENST00000531405 FEZ2Q9UHY8 353 aaPredicted RBP17.78■□□□□ 0.44
SSSCA1-206ENST00000531405 ERRFI1Q9UJM3 462 aaPredicted RBP17.78■□□□□ 0.44
SSSCA1-206ENST00000531405 ASF1AQ9Y294 204 aa17.78■□□□□ 0.44
SSSCA1-206ENST00000531405 DUSP10Q9Y6W6 482 aa17.78■□□□□ 0.44
SSSCA1-206ENST00000531405 OR51F1A6NGY5 319 aa17.77■□□□□ 0.44
SSSCA1-206ENST00000531405 METTL18O95568 372 aa17.77■□□□□ 0.44
SSSCA1-206ENST00000531405 ACADLP28330 430 aa17.77■□□□□ 0.44
SSSCA1-206ENST00000531405 SPA17Q15506 151 aa17.77■□□□□ 0.44
SSSCA1-206ENST00000531405 ZNF787Q6DD87 383 aa17.77■□□□□ 0.44
SSSCA1-206ENST00000531405 ARHGEF18Q6ZSZ5 1173 aa17.77■□□□□ 0.44
SSSCA1-206ENST00000531405 FAM20CQ8IXL6 584 aa17.77■□□□□ 0.44
SSSCA1-206ENST00000531405 IQCKQ8N0W5 287 aa17.77■□□□□ 0.44
SSSCA1-206ENST00000531405 GALNT16Q8N428 558 aa17.77■□□□□ 0.44
SSSCA1-206ENST00000531405 TAB3Q8N5C8 712 aaPredicted RBP17.77■□□□□ 0.44
SSSCA1-206ENST00000531405 CLEC1AQ8NC01 280 aa17.77■□□□□ 0.44
SSSCA1-206ENST00000531405 ELMO1Q92556 727 aa17.77■□□□□ 0.44
SSSCA1-206ENST00000531405 ALG3Q92685 438 aa17.77■□□□□ 0.44
SSSCA1-206ENST00000531405 INPP5DQ92835 1189 aa17.77■□□□□ 0.44
SSSCA1-206ENST00000531405 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.77■□□□□ 0.44
SSSCA1-206ENST00000531405 FER1L6-AS2Q96M78 137 aa17.77■□□□□ 0.44
SSSCA1-206ENST00000531405 PPP1R2P1Q96PQ5 205 aa17.77■□□□□ 0.44
SSSCA1-206ENST00000531405 IRAK4Q9NWZ3 460 aa17.77■□□□□ 0.44
SSSCA1-206ENST00000531405 IFT80Q9P2H3 777 aaPredicted RBP17.77■□□□□ 0.44
SSSCA1-206ENST00000531405 NDOR1Q9UHB4 597 aa17.77■□□□□ 0.44
SSSCA1-206ENST00000531405 B3GNT3Q9Y2A9 372 aa17.77■□□□□ 0.44
SSSCA1-206ENST00000531405 AP1M2Q9Y6Q5 423 aa17.77■□□□□ 0.44
SSSCA1-206ENST00000531405 CROCCQ5TZA2 2017 aa17.76■□□□□ 0.43
SSSCA1-206ENST00000531405 A0A0J9YY10 115 aa17.76■□□□□ 0.43
SSSCA1-206ENST00000531405 PEX12O00623 359 aa17.76■□□□□ 0.43
SSSCA1-206ENST00000531405 LIN7AO14910 233 aaPredicted RBP17.76■□□□□ 0.43
SSSCA1-206ENST00000531405 ZSCAN9O15535 394 aaPredicted RBP17.76■□□□□ 0.43
SSSCA1-206ENST00000531405 AP2A2O94973 939 aa17.76■□□□□ 0.43
SSSCA1-206ENST00000531405 CBX6O95503 412 aa17.76■□□□□ 0.43
SSSCA1-206ENST00000531405 CLDN1O95832 211 aa17.76■□□□□ 0.43
SSSCA1-206ENST00000531405 DDAH2O95865 285 aa17.76■□□□□ 0.43
SSSCA1-206ENST00000531405 VARSP26640 1264 aaKnown RBP17.76■□□□□ 0.43
SSSCA1-206ENST00000531405 PEBP1P30086 187 aaKnown RBP17.76■□□□□ 0.43
SSSCA1-206ENST00000531405 RWDD2BP57060 319 aa17.76■□□□□ 0.43
SSSCA1-206ENST00000531405 DCDP81605 110 aaKnown RBP17.76■□□□□ 0.43
SSSCA1-206ENST00000531405 MYBPC3Q14896 1274 aa17.76■□□□□ 0.43
SSSCA1-206ENST00000531405 PPP1R32Q7Z5V6 425 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms