RNA–Protein interactions for RNA: ENST00000530267.5

USP35-204, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 2 BASIC

Gene USP35, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-204ENST00000530267 VAPAQ9P0L0 249 aa14.8□□□□□ -0.04
USP35-204ENST00000530267 MRPS23Q9Y3D9 190 aaKnown RBP14.8□□□□□ -0.04
USP35-204ENST00000530267 UPK3BL1B0FP48 263 aa14.8□□□□□ -0.04
USP35-204ENST00000530267 UPK3BL2E5RIL1 263 aa14.8□□□□□ -0.04
USP35-204ENST00000530267 SLC28A1O00337 649 aa14.8□□□□□ -0.04
USP35-204ENST00000530267 XYLBO75191 536 aa14.8□□□□□ -0.04
USP35-204ENST00000530267 CYP2A6P11509 494 aaPredicted RBP14.8□□□□□ -0.04
USP35-204ENST00000530267 PBLDP30039 288 aaPredicted RBP14.8□□□□□ -0.04
USP35-204ENST00000530267 PREPP48147 710 aa14.8□□□□□ -0.04
USP35-204ENST00000530267 HSPA13P48723 471 aa14.8□□□□□ -0.04
USP35-204ENST00000530267 PLOD1Q02809 727 aaPredicted RBP14.8□□□□□ -0.04
USP35-204ENST00000530267 PPIGQ13427 754 aaKnown RBP eCLIP14.8□□□□□ -0.048e-6■■■■□ 22.7
USP35-204ENST00000530267 NEK5Q6P3R8 708 aa14.8□□□□□ -0.04
USP35-204ENST00000530267 CBR4Q8N4T8 237 aa14.8□□□□□ -0.04
USP35-204ENST00000530267 SELENOMQ8WWX9 145 aa14.8□□□□□ -0.04
USP35-204ENST00000530267 UHRF1Q96T88 793 aaPredicted RBP14.8□□□□□ -0.04
USP35-204ENST00000530267 CGREF1Q99674 301 aa14.8□□□□□ -0.04
USP35-204ENST00000530267 SLC12A9Q9BXP2 914 aa14.8□□□□□ -0.04
USP35-204ENST00000530267 PRM3Q9NNZ6 103 aa14.8□□□□□ -0.04
USP35-204ENST00000530267 LZTS1Q9Y250 596 aa14.8□□□□□ -0.04
USP35-204ENST00000530267 COQ6Q9Y2Z9 468 aa14.8□□□□□ -0.04
USP35-204ENST00000530267 NUP214P35658 2090 aaPredicted RBP14.79□□□□□ -0.04
USP35-204ENST00000530267 WASH3PC4AMC7 463 aa14.79□□□□□ -0.04
USP35-204ENST00000530267 KPNA3O00505 521 aaPredicted RBP14.79□□□□□ -0.04
USP35-204ENST00000530267 FGF19O95750 216 aa14.79□□□□□ -0.04
USP35-204ENST00000530267 JAK1P23458 1154 aa14.79□□□□□ -0.04
USP35-204ENST00000530267 HRH2P25021 359 aa14.79□□□□□ -0.04
USP35-204ENST00000530267 DGKGP49619 791 aa14.79□□□□□ -0.04
USP35-204ENST00000530267 ACOX1Q15067 660 aa14.79□□□□□ -0.04
USP35-204ENST00000530267 CACHD1Q5VU97 1274 aa14.79□□□□□ -0.04
USP35-204ENST00000530267 ZDHHC20Q5W0Z9 365 aa14.79□□□□□ -0.04
USP35-204ENST00000530267 SLC13A3Q8WWT9 602 aa14.79□□□□□ -0.04
USP35-204ENST00000530267 GFM2Q969S9 779 aaKnown RBP14.79□□□□□ -0.04
USP35-204ENST00000530267 ZNF597Q96LX8 424 aa14.79□□□□□ -0.04
USP35-204ENST00000530267 TSC22D3Q99576 134 aa14.79□□□□□ -0.04
USP35-204ENST00000530267 ZBTB18Q99592 522 aa14.79□□□□□ -0.04
USP35-204ENST00000530267 ELOVL6Q9H5J4 265 aa14.79□□□□□ -0.04
USP35-204ENST00000530267 DUS2Q9NX74 493 aaKnown RBP14.79□□□□□ -0.04
USP35-204ENST00000530267 TRPS1Q9UHF7 1281 aa14.79□□□□□ -0.04
USP35-204ENST00000530267 DLGAP4Q9Y2H0 992 aa14.79□□□□□ -0.04
USP35-204ENST00000530267 LINC01553A4QN01 128 aa14.78□□□□□ -0.04
USP35-204ENST00000530267 C16orf96A6NNT2 1141 aa14.78□□□□□ -0.04
USP35-204ENST00000530267 PLK4O00444 970 aa14.78□□□□□ -0.04
USP35-204ENST00000530267 HNRNPRO43390 633 aaKnown RBP14.78□□□□□ -0.04
USP35-204ENST00000530267 TSPAN6O43657 245 aa14.78□□□□□ -0.04
USP35-204ENST00000530267 LRATO95237 230 aa14.78□□□□□ -0.04
USP35-204ENST00000530267 B3GALT4O96024 378 aa14.78□□□□□ -0.04
USP35-204ENST00000530267 ENO2P09104 434 aaPredicted RBP14.78□□□□□ -0.04
USP35-204ENST00000530267 SMIM18P0DKX4 95 aa14.78□□□□□ -0.04
USP35-204ENST00000530267 HLA-EP13747 358 aa14.78□□□□□ -0.04
USP35-204ENST00000530267 HALP42357 657 aa14.78□□□□□ -0.04
USP35-204ENST00000530267 POLE2P56282 527 aa14.78□□□□□ -0.04
USP35-204ENST00000530267 IRX1P78414 480 aaPredicted RBP14.78□□□□□ -0.04
USP35-204ENST00000530267 MAPKAPK3Q16644 382 aa14.78□□□□□ -0.04
USP35-204ENST00000530267 LIN52Q52LA3 116 aa14.78□□□□□ -0.04
USP35-204ENST00000530267 TMC5Q6UXY8 1006 aa14.78□□□□□ -0.04
USP35-204ENST00000530267 TRIM46Q7Z4K8 759 aa14.78□□□□□ -0.04
USP35-204ENST00000530267 EPHX4Q8IUS5 362 aa14.78□□□□□ -0.04
USP35-204ENST00000530267 ARMC5Q96C12 935 aa14.78□□□□□ -0.04
USP35-204ENST00000530267 RSPRY1Q96DX4 576 aa14.78□□□□□ -0.04
USP35-204ENST00000530267 ZDHHC4Q9NPG8 344 aa14.78□□□□□ -0.04
USP35-204ENST00000530267 AGPAT4Q9NRZ5 378 aa14.78□□□□□ -0.04
USP35-204ENST00000530267 C1orf109Q9NX04 203 aa14.78□□□□□ -0.04
USP35-204ENST00000530267 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.78□□□□□ -0.04
USP35-204ENST00000530267 OAZ3Q9UMX2 235 aa14.78□□□□□ -0.04
USP35-204ENST00000530267 RNF103-CHMP3A0A140T963 221 aa14.78□□□□□ -0.04
USP35-204ENST00000530267 CFAP99D6REC4 459 aa14.78□□□□□ -0.04
USP35-204ENST00000530267 PLOD2O00469 737 aa14.78□□□□□ -0.04
USP35-204ENST00000530267 SGTAO43765 313 aa14.78□□□□□ -0.04
USP35-204ENST00000530267 NUAK1O60285 661 aa14.78□□□□□ -0.04
USP35-204ENST00000530267 OR6B1O95007 311 aa14.78□□□□□ -0.04
USP35-204ENST00000530267 KCNH1O95259 989 aa14.78□□□□□ -0.04
USP35-204ENST00000530267 KRT6AP02538 564 aa14.78□□□□□ -0.04
USP35-204ENST00000530267 KRT6BP04259 564 aa14.78□□□□□ -0.04
USP35-204ENST00000530267 C8GP07360 202 aa14.78□□□□□ -0.04
USP35-204ENST00000530267 FAM58BPP0C7Q3 252 aa14.78□□□□□ -0.04
USP35-204ENST00000530267 BMP2P12643 396 aa14.78□□□□□ -0.04
USP35-204ENST00000530267 BCKDHAP12694 445 aa14.78□□□□□ -0.04
USP35-204ENST00000530267 ZNF30P17039 623 aa14.78□□□□□ -0.04
USP35-204ENST00000530267 FASP25445 335 aa14.78□□□□□ -0.04
USP35-204ENST00000530267 KRT6CP48668 564 aa14.78□□□□□ -0.04
USP35-204ENST00000530267 CTSCP53634 463 aa14.78□□□□□ -0.04
USP35-204ENST00000530267 EEFSECP57772 596 aaKnown RBP14.78□□□□□ -0.04
USP35-204ENST00000530267 DMC1Q14565 340 aa14.78□□□□□ -0.04
USP35-204ENST00000530267 GTDC1Q4AE62 458 aa14.78□□□□□ -0.04
USP35-204ENST00000530267 GLYATQ6IB77 296 aa14.78□□□□□ -0.04
USP35-204ENST00000530267 TRIM74Q86UV6 250 aa14.78□□□□□ -0.04
USP35-204ENST00000530267 SFTPA1Q8IWL2 248 aa14.78□□□□□ -0.04
USP35-204ENST00000530267 DPP10Q8N608 796 aa14.78□□□□□ -0.04
USP35-204ENST00000530267 USP7Q93009 1102 aa14.78□□□□□ -0.04
USP35-204ENST00000530267 BIRC7Q96CA5 298 aa14.78□□□□□ -0.04
USP35-204ENST00000530267 RNF145Q96MT1 663 aa14.78□□□□□ -0.04
USP35-204ENST00000530267 TSSK3Q96PN8 268 aa14.78□□□□□ -0.04
USP35-204ENST00000530267 THUMPD3Q9BV44 507 aaKnown RBP14.78□□□□□ -0.04
USP35-204ENST00000530267 IKZF5Q9H5V7 419 aa14.78□□□□□ -0.04
USP35-204ENST00000530267 CNOT11Q9UKZ1 510 aaKnown RBP14.78□□□□□ -0.04
USP35-204ENST00000530267 SLC8A2Q9UPR5 921 aa14.78□□□□□ -0.04
USP35-204ENST00000530267 DNAH14Q0VDD8 3507 aa14.78□□□□□ -0.04
USP35-204ENST00000530267 TCRBV5S2A0A599 114 aa14.77□□□□□ -0.04
USP35-204ENST00000530267 KANSL1LA0AUZ9 987 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms