RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 ACSL5Q9ULC5 683 aa14.76□□□□□ -0.05
USP47-207ENST00000527733 PRKAB1Q9Y478 270 aa14.76□□□□□ -0.05
USP47-207ENST00000527733 TCRBV21S2A2A0A5A6 115 aa14.75□□□□□ -0.05
USP47-207ENST00000527733 IL6P05231 212 aa14.75□□□□□ -0.05
USP47-207ENST00000527733 OCM2P0CE71 109 aa14.75□□□□□ -0.05
USP47-207ENST00000527733 OCMP0CE72 109 aaPredicted RBP14.75□□□□□ -0.05
USP47-207ENST00000527733 SLC35E2BP0CK96 405 aa14.75□□□□□ -0.05
USP47-207ENST00000527733 BPIP17213 487 aa14.75□□□□□ -0.05
USP47-207ENST00000527733 ITGA2P17301 1181 aa14.75□□□□□ -0.05
USP47-207ENST00000527733 CCR4P51679 360 aa14.75□□□□□ -0.05
USP47-207ENST00000527733 DNAJB13P59910 316 aa14.75□□□□□ -0.05
USP47-207ENST00000527733 COPZ1P61923 177 aa14.75□□□□□ -0.05
USP47-207ENST00000527733 CREB5Q02930 508 aa14.75□□□□□ -0.05
USP47-207ENST00000527733 STX4Q12846 297 aa14.75□□□□□ -0.05
USP47-207ENST00000527733 USP39Q53GS9 565 aaKnown RBP14.75□□□□□ -0.05
USP47-207ENST00000527733 ACSBG2Q5FVE4 666 aa14.75□□□□□ -0.05
USP47-207ENST00000527733 PPP4R4Q6NUP7 873 aa14.75□□□□□ -0.05
USP47-207ENST00000527733 AAGABQ6PD74 315 aa14.75□□□□□ -0.05
USP47-207ENST00000527733 CRTC1Q6UUV9 634 aa14.75□□□□□ -0.05
USP47-207ENST00000527733 CCDC81Q6ZN84 652 aa14.75□□□□□ -0.05
USP47-207ENST00000527733 THOC6Q86W42 341 aaKnown RBP14.75□□□□□ -0.05
USP47-207ENST00000527733 FAM129CQ86XR2 697 aa14.75□□□□□ -0.05
USP47-207ENST00000527733 NRSN1Q8IZ57 195 aa14.75□□□□□ -0.05
USP47-207ENST00000527733 RHEBL1Q8TAI7 183 aa14.75□□□□□ -0.05
USP47-207ENST00000527733 AGAP11Q8TF27 550 aa14.75□□□□□ -0.05
USP47-207ENST00000527733 SLC22A12Q96S37 553 aa14.75□□□□□ -0.05
USP47-207ENST00000527733 VPS29Q9UBQ0 182 aa14.75□□□□□ -0.05
USP47-207ENST00000527733 LRCH1Q9Y2L9 728 aa14.75□□□□□ -0.05
USP47-207ENST00000527733 SPO11Q9Y5K1 396 aa14.75□□□□□ -0.05
USP47-207ENST00000527733 DLEC1Q9Y238 1755 aa14.75□□□□□ -0.05
USP47-207ENST00000527733 HMGCS1Q01581 520 aa14.75□□□□□ -0.05
USP47-207ENST00000527733 DPY19L1Q2PZI1 675 aa14.75□□□□□ -0.05
USP47-207ENST00000527733 TSPAN33Q86UF1 283 aa14.75□□□□□ -0.05
USP47-207ENST00000527733 TRIM69Q86WT6 500 aa14.75□□□□□ -0.05
USP47-207ENST00000527733 STX19Q8N4C7 294 aa14.75□□□□□ -0.05
USP47-207ENST00000527733 KLHDC7BQ96G42 594 aa14.75□□□□□ -0.05
USP47-207ENST00000527733 PLEKHG4BQ96PX9 1271 aa14.75□□□□□ -0.05
USP47-207ENST00000527733 FAM83CQ9BQN1 747 aa14.75□□□□□ -0.05
USP47-207ENST00000527733 EXD2Q9NVH0 621 aa14.75□□□□□ -0.05
USP47-207ENST00000527733 DDX18Q9NVP1 670 aaKnown RBP14.75□□□□□ -0.05
USP47-207ENST00000527733 IL17CQ9P0M4 197 aa14.75□□□□□ -0.05
USP47-207ENST00000527733 PPM1HQ9ULR3 514 aa14.75□□□□□ -0.05
USP47-207ENST00000527733 SLC9A8Q9Y2E8 581 aa14.75□□□□□ -0.05
USP47-207ENST00000527733 ZCCHC18P0CG32 403 aa14.75□□□□□ -0.05
USP47-207ENST00000527733 C6P13671 934 aa14.75□□□□□ -0.05
USP47-207ENST00000527733 TCEAL5Q5H9L2 206 aa14.75□□□□□ -0.05
USP47-207ENST00000527733 TMEM198Q66K66 360 aa14.75□□□□□ -0.05
USP47-207ENST00000527733 ROPN1LQ96C74 230 aa14.75□□□□□ -0.05
USP47-207ENST00000527733 CFHR5Q9BXR6 569 aa14.75□□□□□ -0.05
USP47-207ENST00000527733 ROGDIQ9GZN7 287 aa14.75□□□□□ -0.05
USP47-207ENST00000527733 EXOSC4Q9NPD3 245 aaKnown RBP14.75□□□□□ -0.05
USP47-207ENST00000527733 MYO18AQ92614 2054 aaKnown RBP14.75□□□□□ -0.05
USP47-207ENST00000527733 H3BN98 237 aa14.74□□□□□ -0.05
USP47-207ENST00000527733 VEGFDO43915 354 aa14.74□□□□□ -0.05
USP47-207ENST00000527733 UQCRBP14927 111 aa14.74□□□□□ -0.05
USP47-207ENST00000527733 FOSL2P15408 326 aa14.74□□□□□ -0.05
USP47-207ENST00000527733 MSX2P35548 267 aaPredicted RBP14.74□□□□□ -0.05
USP47-207ENST00000527733 HNRNPA1L2Q32P51 320 aaKnown RBP14.74□□□□□ -0.05
USP47-207ENST00000527733 ERICH5Q6P6B1 374 aa14.74□□□□□ -0.05
USP47-207ENST00000527733 HPS6Q86YV9 775 aa14.74□□□□□ -0.05
USP47-207ENST00000527733 FAM13CQ8NE31 585 aa14.74□□□□□ -0.05
USP47-207ENST00000527733 OR4F6Q8NGB9 312 aa14.74□□□□□ -0.05
USP47-207ENST00000527733 NR1H4Q96RI1 486 aaPredicted RBP14.74□□□□□ -0.05
USP47-207ENST00000527733 ZNF184Q99676 751 aaPredicted RBP14.74□□□□□ -0.05
USP47-207ENST00000527733 LOC730098B7Z3J9 87 aa14.74□□□□□ -0.05
USP47-207ENST00000527733 HOXB6P17509 224 aaKnown RBP14.74□□□□□ -0.05
USP47-207ENST00000527733 HOXA9P31269 272 aa14.74□□□□□ -0.05
USP47-207ENST00000527733 MPP2Q14168 576 aa14.74□□□□□ -0.05
USP47-207ENST00000527733 ADRM1Q16186 407 aa14.74□□□□□ -0.05
USP47-207ENST00000527733 FAM174BQ3ZCQ3 159 aa14.74□□□□□ -0.05
USP47-207ENST00000527733 REP15Q6BDI9 236 aa14.74□□□□□ -0.05
USP47-207ENST00000527733 RSPO2Q6UXX9 243 aaPredicted RBP14.74□□□□□ -0.05
USP47-207ENST00000527733 GOLGA7Q7Z5G4 137 aa14.74□□□□□ -0.05
USP47-207ENST00000527733 SETD9Q8NE22 299 aa14.74□□□□□ -0.05
USP47-207ENST00000527733 OR9A1PQ8NGU1 263 aa14.74□□□□□ -0.05
USP47-207ENST00000527733 MTG2Q9H4K7 406 aa14.74□□□□□ -0.05
USP47-207ENST00000527733 AKTIPQ9H8T0 292 aa14.74□□□□□ -0.05
USP47-207ENST00000527733 TMEM233B4DJY2 109 aa14.74□□□□□ -0.05
USP47-207ENST00000527733 CLDN4O14493 209 aa14.74□□□□□ -0.05
USP47-207ENST00000527733 RNGTTO60942 597 aaKnown RBP14.74□□□□□ -0.05
USP47-207ENST00000527733 KLKB1P03952 638 aa14.74□□□□□ -0.05
USP47-207ENST00000527733 ADRB3P13945 408 aa14.74□□□□□ -0.05
USP47-207ENST00000527733 CENPAP49450 140 aa14.74□□□□□ -0.05
USP47-207ENST00000527733 EPS8Q12929 822 aa14.74□□□□□ -0.05
USP47-207ENST00000527733 ZNF852Q6ZMS4 543 aa14.74□□□□□ -0.05
USP47-207ENST00000527733 TMEM145Q8NBT3 493 aa14.74□□□□□ -0.05
USP47-207ENST00000527733 ARNT2Q9HBZ2 717 aa14.74□□□□□ -0.05
USP47-207ENST00000527733 TAC3Q9UHF0 121 aa14.74□□□□□ -0.05
USP47-207ENST00000527733 CDH22Q9UJ99 828 aa14.74□□□□□ -0.05
USP47-207ENST00000527733 KLHL20Q9Y2M5 609 aa14.74□□□□□ -0.05
USP47-207ENST00000527733 IGLON5A6NGN9 336 aa14.74□□□□□ -0.05
USP47-207ENST00000527733 B4DGG1 531 aa14.74□□□□□ -0.05
USP47-207ENST00000527733 SUV39H1O43463 412 aa14.74□□□□□ -0.05
USP47-207ENST00000527733 SLC28A2O43868 658 aa14.74□□□□□ -0.05
USP47-207ENST00000527733 CFIP05156 583 aa14.74□□□□□ -0.05
USP47-207ENST00000527733 EBLN1P0CF75 366 aa14.74□□□□□ -0.05
USP47-207ENST00000527733 CD1DP15813 335 aa14.74□□□□□ -0.05
USP47-207ENST00000527733 CTSOP43234 321 aaPredicted RBP14.74□□□□□ -0.05
USP47-207ENST00000527733 SERPINB10P48595 397 aa14.74□□□□□ -0.05
USP47-207ENST00000527733 ARRB1P49407 418 aaPredicted RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms