RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 KIAA1143Q96AT1 154 aaPredicted RBP25.55■■□□□ 1.68
TSPAN4-217ENST00000527644 EFHD1Q9BUP0 239 aa25.55■■□□□ 1.68
TSPAN4-217ENST00000527644 TUBB2BQ9BVA1 445 aa25.55■■□□□ 1.68
TSPAN4-217ENST00000527644 PITPNM3Q9BZ71 974 aa25.55■■□□□ 1.68
TSPAN4-217ENST00000527644 KCND1Q9NSA2 647 aa25.55■■□□□ 1.68
TSPAN4-217ENST00000527644 INTS10Q9NVR2 710 aaKnown RBP25.55■■□□□ 1.68
TSPAN4-217ENST00000527644 SOHLH2Q9NX45 425 aa25.55■■□□□ 1.68
TSPAN4-217ENST00000527644 ACTR10Q9NZ32 417 aa25.55■■□□□ 1.68
TSPAN4-217ENST00000527644 MAD1L1Q9Y6D9 718 aa25.55■■□□□ 1.68
TSPAN4-217ENST00000527644 PIPSLA2A3N6 862 aa25.54■■□□□ 1.68
TSPAN4-217ENST00000527644 SLC9B1P1A6NJY1 282 aa25.54■■□□□ 1.68
TSPAN4-217ENST00000527644 KIAA0754O94854 1291 aa25.54■■□□□ 1.68
TSPAN4-217ENST00000527644 TPBGLP0DKB5 382 aa25.54■■□□□ 1.68
TSPAN4-217ENST00000527644 ABRQ12979 859 aa25.54■■□□□ 1.68
TSPAN4-217ENST00000527644 PLEKHS1Q5SXH7 462 aa25.54■■□□□ 1.68
TSPAN4-217ENST00000527644 CENPUQ71F23 418 aa25.54■■□□□ 1.68
TSPAN4-217ENST00000527644 KLHL7Q8IXQ5 586 aa25.54■■□□□ 1.68
TSPAN4-217ENST00000527644 OR8K5Q8NH50 307 aa25.54■■□□□ 1.68
TSPAN4-217ENST00000527644 TTC9Q92623 222 aa25.54■■□□□ 1.68
TSPAN4-217ENST00000527644 IL1RAPL1Q9NZN1 696 aa25.54■■□□□ 1.68
TSPAN4-217ENST00000527644 CRYL1Q9Y2S2 319 aa25.54■■□□□ 1.68
TSPAN4-217ENST00000527644 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.54■■□□□ 1.68
TSPAN4-217ENST00000527644 EIF4E1BA6NMX2 242 aaKnown RBP25.53■■□□□ 1.68
TSPAN4-217ENST00000527644 CCDC188H7C350 402 aa25.53■■□□□ 1.68
TSPAN4-217ENST00000527644 MAP3K7O43318 606 aa25.53■■□□□ 1.68
TSPAN4-217ENST00000527644 DR1Q01658 176 aa25.53■■□□□ 1.68
TSPAN4-217ENST00000527644 LONRF1Q17RB8 773 aa25.53■■□□□ 1.68
TSPAN4-217ENST00000527644 TAF1BQ53T94 588 aaPredicted RBP25.53■■□□□ 1.68
TSPAN4-217ENST00000527644 IZUMO3Q5VZ72 239 aa25.53■■□□□ 1.68
TSPAN4-217ENST00000527644 PCSK4Q6UW60 755 aa25.53■■□□□ 1.68
TSPAN4-217ENST00000527644 LMNTD2Q8IXW0 634 aa25.53■■□□□ 1.68
TSPAN4-217ENST00000527644 CFAP61Q8NHU2 1237 aa25.53■■□□□ 1.68
TSPAN4-217ENST00000527644 STAMBPL1Q96FJ0 436 aa25.53■■□□□ 1.68
TSPAN4-217ENST00000527644 GPN2Q9H9Y4 310 aaPredicted RBP25.53■■□□□ 1.68
TSPAN4-217ENST00000527644 LNPEPQ9UIQ6 1025 aa25.53■■□□□ 1.68
TSPAN4-217ENST00000527644 LOC101059948A0A1B0GTJ6 334 aa25.52■■□□□ 1.68
TSPAN4-217ENST00000527644 S1PR4O95977 384 aa25.52■■□□□ 1.68
TSPAN4-217ENST00000527644 MT-ND3P03897 115 aa25.52■■□□□ 1.68
TSPAN4-217ENST00000527644 CHRM5P08912 532 aaPredicted RBP25.52■■□□□ 1.68
TSPAN4-217ENST00000527644 IVDP26440 423 aa25.52■■□□□ 1.68
TSPAN4-217ENST00000527644 STAT5AP42229 794 aa25.52■■□□□ 1.68
TSPAN4-217ENST00000527644 ZNF470Q6ECI4 717 aa25.52■■□□□ 1.68
TSPAN4-217ENST00000527644 PWWP2BQ6NUJ5 590 aa25.52■■□□□ 1.68
TSPAN4-217ENST00000527644 SPESP1Q6UW49 350 aa25.52■■□□□ 1.68
TSPAN4-217ENST00000527644 DCUN1D3Q8IWE4 304 aa25.52■■□□□ 1.68
TSPAN4-217ENST00000527644 GALNT6Q8NCL4 622 aa25.52■■□□□ 1.68
TSPAN4-217ENST00000527644 CALML6Q8TD86 181 aa25.52■■□□□ 1.68
TSPAN4-217ENST00000527644 SLC39A7Q92504 469 aa25.52■■□□□ 1.68
TSPAN4-217ENST00000527644 ZNF501Q96CX3 271 aaPredicted RBP25.52■■□□□ 1.68
TSPAN4-217ENST00000527644 TRAPPC9Q96Q05 1148 aa25.52■■□□□ 1.68
TSPAN4-217ENST00000527644 TWSG1Q9GZX9 223 aa25.52■■□□□ 1.68
TSPAN4-217ENST00000527644 SYTL2Q9HCH5 934 aa25.52■■□□□ 1.68
TSPAN4-217ENST00000527644 PLAGL1Q9UM63 463 aa25.52■■□□□ 1.68
TSPAN4-217ENST00000527644 MRFAP1Q9Y605 127 aa25.52■■□□□ 1.68
TSPAN4-217ENST00000527644 FAM169AQ9Y6X4 670 aa25.52■■□□□ 1.68
TSPAN4-217ENST00000527644 FANCGO15287 622 aa25.51■■□□□ 1.67
TSPAN4-217ENST00000527644 PKMP14618 531 aaKnown RBP25.51■■□□□ 1.67
TSPAN4-217ENST00000527644 ST6GAL1P15907 406 aa25.51■■□□□ 1.67
TSPAN4-217ENST00000527644 CHRM3P20309 590 aa25.51■■□□□ 1.67
TSPAN4-217ENST00000527644 RAB28P51157 221 aa25.51■■□□□ 1.67
TSPAN4-217ENST00000527644 GPR19Q15760 415 aa25.51■■□□□ 1.67
TSPAN4-217ENST00000527644 KYNUQ16719 465 aa25.51■■□□□ 1.67
TSPAN4-217ENST00000527644 SLC45A3Q96JT2 553 aa25.51■■□□□ 1.67
TSPAN4-217ENST00000527644 OR2A14Q96R47 310 aa25.51■■□□□ 1.67
TSPAN4-217ENST00000527644 SLC12A9Q9BXP2 914 aa25.51■■□□□ 1.67
TSPAN4-217ENST00000527644 FANCEQ9HB96 536 aa25.51■■□□□ 1.67
TSPAN4-217ENST00000527644 LATS2Q9NRM7 1088 aa25.51■■□□□ 1.67
TSPAN4-217ENST00000527644 C20orf96Q9NUD7 363 aaPredicted RBP25.51■■□□□ 1.67
TSPAN4-217ENST00000527644 SMG1Q96Q15 3661 aaKnown RBP25.51■■□□□ 1.67
TSPAN4-217ENST00000527644 NIPSNAP2O75323 286 aa25.5■■□□□ 1.67
TSPAN4-217ENST00000527644 TIAF1O95411 115 aa25.5■■□□□ 1.67
TSPAN4-217ENST00000527644 ITGB2P05107 769 aa25.5■■□□□ 1.67
TSPAN4-217ENST00000527644 CCNYL3P0C7X3 344 aa25.5■■□□□ 1.67
TSPAN4-217ENST00000527644 MSL3P1P0C860 447 aa25.5■■□□□ 1.67
TSPAN4-217ENST00000527644 UGT2B7P16662 529 aa25.5■■□□□ 1.67
TSPAN4-217ENST00000527644 PGAM1P18669 254 aa25.5■■□□□ 1.67
TSPAN4-217ENST00000527644 MORF4L2Q15014 288 aa25.5■■□□□ 1.67
TSPAN4-217ENST00000527644 TTC23LQ6PF05 361 aa25.5■■□□□ 1.67
TSPAN4-217ENST00000527644 UNC5BQ8IZJ1 945 aa25.5■■□□□ 1.67
TSPAN4-217ENST00000527644 SERBP1Q8NC51 408 aaKnown RBP eCLIP25.5■■□□□ 1.67
TSPAN4-217ENST00000527644 RNF31Q96EP0 1072 aa25.5■■□□□ 1.67
TSPAN4-217ENST00000527644 NAT9Q9BTE0 207 aa25.5■■□□□ 1.67
TSPAN4-217ENST00000527644 SPHK1Q9NYA1 384 aa25.5■■□□□ 1.67
TSPAN4-217ENST00000527644 ZNF891A8MT65 544 aaPredicted RBP25.49■■□□□ 1.67
TSPAN4-217ENST00000527644 SMAPO00193 183 aa25.49■■□□□ 1.67
TSPAN4-217ENST00000527644 PKLRP30613 574 aa25.49■■□□□ 1.67
TSPAN4-217ENST00000527644 DHX9Q08211 1270 aaKnown RBP25.49■■□□□ 1.67
TSPAN4-217ENST00000527644 CTBP1Q13363 440 aa25.49■■□□□ 1.67
TSPAN4-217ENST00000527644 KIR2DS3Q14952 304 aa25.49■■□□□ 1.67
TSPAN4-217ENST00000527644 ZNF789Q5FWF6 425 aa25.49■■□□□ 1.67
TSPAN4-217ENST00000527644 DENND6AQ8IWF6 608 aa25.49■■□□□ 1.67
TSPAN4-217ENST00000527644 SKA2Q8WVK7 121 aaPredicted RBP25.49■■□□□ 1.67
TSPAN4-217ENST00000527644 FOPNLQ96NB1 174 aa25.49■■□□□ 1.67
TSPAN4-217ENST00000527644 EBNA1BP2Q99848 306 aaKnown RBP25.49■■□□□ 1.67
TSPAN4-217ENST00000527644 PADI1Q9ULC6 663 aa25.49■■□□□ 1.67
TSPAN4-217ENST00000527644 ATMQ13315 3056 aa25.48■■□□□ 1.67
TSPAN4-217ENST00000527644 E5RI56 91 aa25.48■■□□□ 1.67
TSPAN4-217ENST00000527644 TTC4O95801 387 aa25.48■■□□□ 1.67
TSPAN4-217ENST00000527644 PVRP15151 417 aa25.48■■□□□ 1.67
TSPAN4-217ENST00000527644 ATP5DP30049 168 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms