RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 WDR59Q6PJI9 974 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 CCDC137Q6PK04 289 aaKnown RBP3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 BLOC1S2Q6QNY1 142 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 SUSD1Q6UWL2 747 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 VSTM1Q6UX27 236 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 FRMD7Q6ZUT3 714 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 ENOSF1Q7L5Y1 443 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 STRA8Q7Z7C7 330 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 ZDHHC17Q8IUH5 632 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 UBE2J2Q8N2K1 259 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 ANKFN1Q8N957 763 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 FANCBQ8NB91 859 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 SLC37A3Q8NCC5 494 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 C11orf65Q8NCR3 313 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 MCUQ8NE86 351 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 TRPV3Q8NET8 790 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 OR5T2Q8NGG2 359 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 OR52H1Q8NGJ2 320 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 SPATA20Q8TB22 786 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 RAET1EQ8TD07 263 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 RNF139Q8WU17 664 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 SNX19Q92543 992 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 RPL36ALQ969Q0 106 aaKnown RBP3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 RILPL2Q969X0 211 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 TMIGD2Q96BF3 282 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 C19orf60Q96EN9 201 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 MCRS1Q96EZ8 462 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 FEM1CQ96JP0 617 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 TCEANC2Q96MN5 208 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 FOPNLQ96NB1 174 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 SERPINB11Q96P15 392 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 PANX3Q96QZ0 392 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 FMO2Q99518 471 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 BCL7BQ9BQE9 202 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 PELOQ9BRX2 385 aaKnown RBP3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 PI4K2AQ9BTU6 479 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 TRAF4Q9BUZ4 470 aaPredicted RBP3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 MRI1Q9BV20 369 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 ZNF416Q9BWM5 594 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 OSBPL8Q9BZF1 889 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 C1orf21Q9H246 121 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 IL25Q9H293 177 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 NEUROG2Q9H2A3 272 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 STN1Q9H668 368 aaKnown RBP3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 PCDHB16Q9NRJ7 776 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 RGS18Q9NS28 235 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 UFSP2Q9NUQ7 469 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 ARL8BQ9NVJ2 186 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 CMTM6Q9NX76 183 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 NKIRAS1Q9NYS0 192 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 WWOXQ9NZC7 414 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 MAT2BQ9NZL9 334 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 HMG20BQ9P0W2 317 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 VPS54Q9P1Q0 977 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 COPS3Q9UNS2 423 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 PLA2G4CQ9UP65 541 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 BTBD3Q9Y2F9 522 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 MTO1Q9Y2Z2 717 aaKnown RBP3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 ASB4Q9Y574 426 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 ACTL7AQ9Y615 435 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 AP4B1Q9Y6B7 739 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 WNT6Q9Y6F9 365 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 AP1M2Q9Y6Q5 423 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 A2MP01023 1474 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 ABCB11O95342 1321 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 MYO5BQ9ULV0 1848 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 PIK3C2AO00443 1686 aa3.65□□□□□ -1.83
CLNS1A-209ENST00000527299 UNC13BO14795 1591 aa3.64□□□□□ -1.83
CLNS1A-209ENST00000527299 PTPRFP10586 1907 aa3.64□□□□□ -1.83
CLNS1A-209ENST00000527299 DICER1Q9UPY3 1922 aaKnown RBP3.64□□□□□ -1.83
CLNS1A-209ENST00000527299 MYO3AQ8NEV4 1616 aa3.64□□□□□ -1.83
CLNS1A-209ENST00000527299 MADDQ8WXG6 1647 aa3.64□□□□□ -1.83
CLNS1A-209ENST00000527299 PRR23AA6NEV1 266 aa3.64□□□□□ -1.83
CLNS1A-209ENST00000527299 LOC110117498-PIK3R3F6TDL0 507 aa3.64□□□□□ -1.83
CLNS1A-209ENST00000527299 PGRMC1O00264 195 aaKnown RBP3.64□□□□□ -1.83
CLNS1A-209ENST00000527299 AP3D1O14617 1153 aa3.64□□□□□ -1.83
CLNS1A-209ENST00000527299 DNALI1O14645 258 aaPredicted RBP3.64□□□□□ -1.83
CLNS1A-209ENST00000527299 ABCD4O14678 606 aa3.64□□□□□ -1.83
CLNS1A-209ENST00000527299 TSPAN4O14817 238 aa3.64□□□□□ -1.83
CLNS1A-209ENST00000527299 ATP2A1O14983 1001 aa3.64□□□□□ -1.83
CLNS1A-209ENST00000527299 ZBTB5O15062 677 aa3.64□□□□□ -1.83
CLNS1A-209ENST00000527299 NUPL2O15504 423 aaKnown RBP3.64□□□□□ -1.83
CLNS1A-209ENST00000527299 HS6ST1O60243 411 aa3.64□□□□□ -1.83
CLNS1A-209ENST00000527299 CIDEAO60543 219 aa3.64□□□□□ -1.83
CLNS1A-209ENST00000527299 PLOD3O60568 738 aa3.64□□□□□ -1.83
CLNS1A-209ENST00000527299 JAK2O60674 1132 aa3.64□□□□□ -1.83
CLNS1A-209ENST00000527299 EIF1BO60739 113 aaKnown RBP3.64□□□□□ -1.83
CLNS1A-209ENST00000527299 SOCS5O75159 536 aa3.64□□□□□ -1.83
CLNS1A-209ENST00000527299 MOSPD3O75425 235 aa3.64□□□□□ -1.83
CLNS1A-209ENST00000527299 SPAG6O75602 509 aa3.64□□□□□ -1.83
CLNS1A-209ENST00000527299 RHOBTB1O94844 696 aa3.64□□□□□ -1.83
CLNS1A-209ENST00000527299 CCNB2O95067 398 aa3.64□□□□□ -1.83
CLNS1A-209ENST00000527299 MFN2O95140 757 aa3.64□□□□□ -1.83
CLNS1A-209ENST00000527299 LYPLA2O95372 231 aa3.64□□□□□ -1.83
CLNS1A-209ENST00000527299 DEXIO95424 95 aa3.64□□□□□ -1.83
CLNS1A-209ENST00000527299 NTN1O95631 604 aa3.64□□□□□ -1.83
CLNS1A-209ENST00000527299 LDOC1O95751 146 aaPredicted RBP3.64□□□□□ -1.83
CLNS1A-209ENST00000527299 PTBP3O95758 552 aaKnown RBP3.64□□□□□ -1.83
CLNS1A-209ENST00000527299 TGM6O95932 706 aa3.64□□□□□ -1.83
CLNS1A-209ENST00000527299 PTTG1O95997 202 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms