RNA–Protein interactions for RNA: ENST00000526734.5

VPS28-206, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 570 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-206ENST00000526734 UNC5AQ6ZN44 842 aa19.97■□□□□ 0.79
VPS28-206ENST00000526734 OTOAQ7RTW8 1153 aa19.97■□□□□ 0.79
VPS28-206ENST00000526734 PCGF5Q86SE9 256 aa19.97■□□□□ 0.79
VPS28-206ENST00000526734 TMEM135Q86UB9 458 aa19.97■□□□□ 0.79
VPS28-206ENST00000526734 NAT8LQ8N9F0 302 aa19.97■□□□□ 0.79
VPS28-206ENST00000526734 LKAAEAR1Q8TD35 194 aa19.97■□□□□ 0.79
VPS28-206ENST00000526734 STARD8Q92502 1023 aa19.97■□□□□ 0.79
VPS28-206ENST00000526734 SEC14L1Q92503 715 aa19.97■□□□□ 0.79
VPS28-206ENST00000526734 LPGAT1Q92604 370 aa19.97■□□□□ 0.79
VPS28-206ENST00000526734 LRFN5Q96NI6 719 aa19.97■□□□□ 0.79
VPS28-206ENST00000526734 TRAPPC9Q96Q05 1148 aa19.97■□□□□ 0.79
VPS28-206ENST00000526734 RAB11FIP5Q9BXF6 653 aa19.97■□□□□ 0.79
VPS28-206ENST00000526734 XKR8Q9H6D3 395 aa19.97■□□□□ 0.79
VPS28-206ENST00000526734 INTS10Q9NVR2 710 aaKnown RBP19.97■□□□□ 0.79
VPS28-206ENST00000526734 PCYOX1Q9UHG3 505 aa19.97■□□□□ 0.79
VPS28-206ENST00000526734 PCDHB3Q9Y5E6 796 aa19.97■□□□□ 0.79
VPS28-206ENST00000526734 PCDHGA6Q9Y5G7 932 aa19.97■□□□□ 0.79
VPS28-206ENST00000526734 MGAQ8IWI9 3026 aa19.96■□□□□ 0.79
VPS28-206ENST00000526734 IQCF5A8MTL0 148 aa19.96■□□□□ 0.79
VPS28-206ENST00000526734 SCRG1O75711 98 aa19.96■□□□□ 0.79
VPS28-206ENST00000526734 CHRM5P08912 532 aaPredicted RBP19.96■□□□□ 0.79
VPS28-206ENST00000526734 DLSTP36957 453 aa19.96■□□□□ 0.79
VPS28-206ENST00000526734 RAB28P51157 221 aa19.96■□□□□ 0.79
VPS28-206ENST00000526734 TERF1P54274 439 aa19.96■□□□□ 0.79
VPS28-206ENST00000526734 GNG11P61952 73 aa19.96■□□□□ 0.79
VPS28-206ENST00000526734 CDC20Q12834 499 aa19.96■□□□□ 0.79
VPS28-206ENST00000526734 DHX34Q14147 1143 aaKnown RBP19.96■□□□□ 0.79
VPS28-206ENST00000526734 GPR19Q15760 415 aa19.96■□□□□ 0.79
VPS28-206ENST00000526734 TBR1Q16650 682 aa19.96■□□□□ 0.79
VPS28-206ENST00000526734 KYNUQ16719 465 aa19.96■□□□□ 0.79
VPS28-206ENST00000526734 ANKRD20A4Q4UJ75 823 aa19.96■□□□□ 0.79
VPS28-206ENST00000526734 PAPD7Q5XG87 772 aaKnown RBP19.96■□□□□ 0.79
VPS28-206ENST00000526734 NEPROQ6NW34 567 aa19.96■□□□□ 0.79
VPS28-206ENST00000526734 BORAQ6PGQ7 559 aa19.96■□□□□ 0.79
VPS28-206ENST00000526734 CES3Q6UWW8 571 aa19.96■□□□□ 0.79
VPS28-206ENST00000526734 NAPRTQ6XQN6 538 aa19.96■□□□□ 0.79
VPS28-206ENST00000526734 SYDE1Q6ZW31 735 aaPredicted RBP19.96■□□□□ 0.79
VPS28-206ENST00000526734 TMEM126BQ8IUX1 230 aa19.96■□□□□ 0.79
VPS28-206ENST00000526734 KRT222Q8N1A0 295 aa19.96■□□□□ 0.79
VPS28-206ENST00000526734 CALML6Q8TD86 181 aa19.96■□□□□ 0.79
VPS28-206ENST00000526734 EXTL1Q92935 676 aa19.96■□□□□ 0.79
VPS28-206ENST00000526734 SLC22A18Q96BI1 424 aa19.96■□□□□ 0.79
VPS28-206ENST00000526734 ZNF669Q96BR6 464 aaPredicted RBP19.96■□□□□ 0.79
VPS28-206ENST00000526734 LHX9Q9NQ69 397 aa19.96■□□□□ 0.79
VPS28-206ENST00000526734 CROTQ9UKG9 612 aa19.96■□□□□ 0.79
VPS28-206ENST00000526734 ZNF185O15231 689 aa19.95■□□□□ 0.78
VPS28-206ENST00000526734 C1QL1O75973 258 aa19.95■□□□□ 0.78
VPS28-206ENST00000526734 USP1O94782 785 aa19.95■□□□□ 0.78
VPS28-206ENST00000526734 TIAF1O95411 115 aa19.95■□□□□ 0.78
VPS28-206ENST00000526734 ST6GAL1P15907 406 aa19.95■□□□□ 0.78
VPS28-206ENST00000526734 UGT2B7P16662 529 aa19.95■□□□□ 0.78
VPS28-206ENST00000526734 TCN2P20062 427 aa19.95■□□□□ 0.78
VPS28-206ENST00000526734 PKLRP30613 574 aa19.95■□□□□ 0.78
VPS28-206ENST00000526734 CSE1LP55060 971 aaKnown RBP19.95■□□□□ 0.78
VPS28-206ENST00000526734 THOC5Q13769 683 aaKnown RBP19.95■□□□□ 0.78
VPS28-206ENST00000526734 PTK6Q13882 451 aa19.95■□□□□ 0.78
VPS28-206ENST00000526734 SLC5A12Q1EHB4 618 aa19.95■□□□□ 0.78
VPS28-206ENST00000526734 LINC00303Q3SY05 128 aa19.95■□□□□ 0.78
VPS28-206ENST00000526734 RNASEH2BQ5TBB1 312 aaKnown RBP19.95■□□□□ 0.78
VPS28-206ENST00000526734 CILP2Q8IUL8 1156 aa19.95■□□□□ 0.78
VPS28-206ENST00000526734 VRK3Q8IV63 474 aa19.95■□□□□ 0.78
VPS28-206ENST00000526734 UNC5BQ8IZJ1 945 aa19.95■□□□□ 0.78
VPS28-206ENST00000526734 RAB42Q8N4Z0 105 aa19.95■□□□□ 0.78
VPS28-206ENST00000526734 GABPB2Q8TAK5 448 aaPredicted RBP19.95■□□□□ 0.78
VPS28-206ENST00000526734 MAGEC3Q8TD91 643 aa19.95■□□□□ 0.78
VPS28-206ENST00000526734 TCTN2Q96GX1 697 aa19.95■□□□□ 0.78
VPS28-206ENST00000526734 PPM1MQ96MI6 270 aa19.95■□□□□ 0.78
VPS28-206ENST00000526734 FOPNLQ96NB1 174 aa19.95■□□□□ 0.78
VPS28-206ENST00000526734 BIRC8Q96P09 236 aa19.95■□□□□ 0.78
VPS28-206ENST00000526734 NAPGQ99747 312 aaPredicted RBP19.95■□□□□ 0.78
VPS28-206ENST00000526734 ADNPQ9H2P0 1102 aa19.95■□□□□ 0.78
VPS28-206ENST00000526734 ASIC3Q9UHC3 531 aa19.95■□□□□ 0.78
VPS28-206ENST00000526734 IL17BQ9UHF5 180 aa19.95■□□□□ 0.78
VPS28-206ENST00000526734 SERTAD3Q9UJW9 196 aa19.95■□□□□ 0.78
VPS28-206ENST00000526734 LOC400499M0QZD8 3231 aa19.95■□□□□ 0.78
VPS28-206ENST00000526734 ATRXP46100 2492 aa19.95■□□□□ 0.78
VPS28-206ENST00000526734 A0A0J9YY10 115 aa19.94■□□□□ 0.78
VPS28-206ENST00000526734 SMAPO00193 183 aa19.94■□□□□ 0.78
VPS28-206ENST00000526734 TERTO14746 1132 aaKnown RBP19.94■□□□□ 0.78
VPS28-206ENST00000526734 FKBP9O95302 570 aa19.94■□□□□ 0.78
VPS28-206ENST00000526734 CCNFP41002 786 aa19.94■□□□□ 0.78
VPS28-206ENST00000526734 CYP4F2P78329 520 aa19.94■□□□□ 0.78
VPS28-206ENST00000526734 DNASE1L3Q13609 305 aa19.94■□□□□ 0.78
VPS28-206ENST00000526734 LY6DQ14210 128 aa19.94■□□□□ 0.78
VPS28-206ENST00000526734 CTSL3PQ5NE16 218 aa19.94■□□□□ 0.78
VPS28-206ENST00000526734 FBXO38Q6PIJ6 1188 aa19.94■□□□□ 0.78
VPS28-206ENST00000526734 ZNF843Q8N446 348 aa19.94■□□□□ 0.78
VPS28-206ENST00000526734 C19orf47Q8N9M1 422 aaKnown RBP19.94■□□□□ 0.78
VPS28-206ENST00000526734 RAD51AP1Q96B01 352 aa19.94■□□□□ 0.78
VPS28-206ENST00000526734 OR2A14Q96R47 310 aa19.94■□□□□ 0.78
VPS28-206ENST00000526734 NAT9Q9BTE0 207 aa19.94■□□□□ 0.78
VPS28-206ENST00000526734 GPR87Q9BY21 358 aa19.94■□□□□ 0.78
VPS28-206ENST00000526734 DDX47Q9H0S4 455 aaKnown RBP19.94■□□□□ 0.78
VPS28-206ENST00000526734 RNF14Q9UBS8 474 aa19.94■□□□□ 0.78
VPS28-206ENST00000526734 SAR1BQ9Y6B6 198 aa19.94■□□□□ 0.78
VPS28-206ENST00000526734 MAD1L1Q9Y6D9 718 aa19.94■□□□□ 0.78
VPS28-206ENST00000526734 ZCWPW2A0A1B0GU75 182 aa19.93■□□□□ 0.78
VPS28-206ENST00000526734 USP27XA6NNY8 438 aa19.93■□□□□ 0.78
VPS28-206ENST00000526734 GOLGA8MH3BSY2 632 aa19.93■□□□□ 0.78
VPS28-206ENST00000526734 DNALI1O14645 258 aaPredicted RBP19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms