RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 OR6C2Q9NZP2 312 aa2.07□□□□□ -2.08
ECHDC1-219ENST00000526299 CTSZQ9UBR2 303 aa2.07□□□□□ -2.08
ECHDC1-219ENST00000526299 PPP2R2CQ9Y2T4 447 aa2.07□□□□□ -2.08
ECHDC1-219ENST00000526299 CSNK1G3Q9Y6M4 447 aa2.07□□□□□ -2.08
ECHDC1-219ENST00000526299 CCDC196A0A1B0GTZ2 297 aa2.06□□□□□ -2.08
ECHDC1-219ENST00000526299 FAM237BA0A1B0GVD1 139 aa2.06□□□□□ -2.08
ECHDC1-219ENST00000526299 A0A1W2PR80 420 aa2.06□□□□□ -2.08
ECHDC1-219ENST00000526299 TMEM129A0AVI4 362 aa2.06□□□□□ -2.08
ECHDC1-219ENST00000526299 SHISA9B4DS77 424 aa2.06□□□□□ -2.08
ECHDC1-219ENST00000526299 GAPDHSO14556 408 aaPredicted RBP2.06□□□□□ -2.08
ECHDC1-219ENST00000526299 NDUFS4O43181 175 aa2.06□□□□□ -2.08
ECHDC1-219ENST00000526299 PIP5K1CO60331 668 aa2.06□□□□□ -2.08
ECHDC1-219ENST00000526299 GALR3O60755 368 aaPredicted RBP2.06□□□□□ -2.08
ECHDC1-219ENST00000526299 CCNDBP1O95273 360 aa2.06□□□□□ -2.08
ECHDC1-219ENST00000526299 IGHEP01854 428 aa2.06□□□□□ -2.08
ECHDC1-219ENST00000526299 NMBRP28336 390 aa2.06□□□□□ -2.08
ECHDC1-219ENST00000526299 SNRPEP62304 92 aaKnown RBP2.06□□□□□ -2.08
ECHDC1-219ENST00000526299 GOLGA8DPQ0D2H9 430 aa2.06□□□□□ -2.08
ECHDC1-219ENST00000526299 FCHO2Q0JRZ9 810 aa2.06□□□□□ -2.08
ECHDC1-219ENST00000526299 MTF1Q14872 753 aa2.06□□□□□ -2.08
ECHDC1-219ENST00000526299 KRTAP5-7Q6L8G8 165 aa2.06□□□□□ -2.08
ECHDC1-219ENST00000526299 CYP20A1Q6UW02 462 aa2.06□□□□□ -2.08
ECHDC1-219ENST00000526299 TMEM207Q6UWW9 146 aa2.06□□□□□ -2.08
ECHDC1-219ENST00000526299 LINGO4Q6UY18 593 aa2.06□□□□□ -2.08
ECHDC1-219ENST00000526299 ARMC8Q8IUR7 673 aa2.06□□□□□ -2.08
ECHDC1-219ENST00000526299 EID3Q8N140 333 aa2.06□□□□□ -2.08
ECHDC1-219ENST00000526299 HTRA1Q92743 480 aa2.06□□□□□ -2.08
ECHDC1-219ENST00000526299 C10orf90Q96M02 699 aa2.06□□□□□ -2.08
ECHDC1-219ENST00000526299 C1orf147Q96MC9 270 aaPredicted RBP2.06□□□□□ -2.08
ECHDC1-219ENST00000526299 NUP85Q9BW27 656 aa2.06□□□□□ -2.08
ECHDC1-219ENST00000526299 TDRD1Q9BXT4 1180 aaKnown RBP2.06□□□□□ -2.08
ECHDC1-219ENST00000526299 SLITRK2Q9H156 845 aa2.06□□□□□ -2.08
ECHDC1-219ENST00000526299 ARRDC1-AS1Q9H2J1 176 aa2.06□□□□□ -2.08
ECHDC1-219ENST00000526299 CPVLQ9H3G5 476 aa2.06□□□□□ -2.08
ECHDC1-219ENST00000526299 B3GAT2Q9NPZ5 323 aa2.06□□□□□ -2.08
ECHDC1-219ENST00000526299 PPANQ9NQ55 473 aaKnown RBP2.06□□□□□ -2.08
ECHDC1-219ENST00000526299 RRP7BPQ9NSQ0 103 aa2.06□□□□□ -2.08
ECHDC1-219ENST00000526299 TAS2R10Q9NYW0 307 aa2.06□□□□□ -2.08
ECHDC1-219ENST00000526299 ARHGAP26Q9UNA1 814 aa2.06□□□□□ -2.08
ECHDC1-219ENST00000526299 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.06□□□□□ -2.081e-7■■■■■ 27.3
ECHDC1-219ENST00000526299 HCFC1P51610 2035 aa2.06□□□□□ -2.08
ECHDC1-219ENST00000526299 TRIOBPQ9H2D6 2365 aa2.05□□□□□ -2.08
ECHDC1-219ENST00000526299 ZNF840PA6NDX5 716 aa2.05□□□□□ -2.08
ECHDC1-219ENST00000526299 NPIPB15A6NHN6 443 aaPredicted RBP2.05□□□□□ -2.08
ECHDC1-219ENST00000526299 HOXC11O43248 304 aaPredicted RBP2.05□□□□□ -2.08
ECHDC1-219ENST00000526299 AVILO75366 819 aa2.05□□□□□ -2.08
ECHDC1-219ENST00000526299 LRCH4O75427 683 aa2.05□□□□□ -2.08
ECHDC1-219ENST00000526299 HPP00738 406 aa2.05□□□□□ -2.08
ECHDC1-219ENST00000526299 GH2P01242 217 aa2.05□□□□□ -2.08
ECHDC1-219ENST00000526299 TSFMP43897 325 aaKnown RBP2.05□□□□□ -2.08
ECHDC1-219ENST00000526299 LYZP61626 148 aa2.05□□□□□ -2.08
ECHDC1-219ENST00000526299 C3AR1Q16581 482 aa2.05□□□□□ -2.08
ECHDC1-219ENST00000526299 SLC25A53Q5H9E4 307 aa2.05□□□□□ -2.08
ECHDC1-219ENST00000526299 INTS11Q5TA45 600 aaKnown RBP2.05□□□□□ -2.08
ECHDC1-219ENST00000526299 CES4AQ5XG92 561 aa2.05□□□□□ -2.08
ECHDC1-219ENST00000526299 ACSM2BQ68CK6 577 aa2.05□□□□□ -2.08
ECHDC1-219ENST00000526299 CYP26C1Q6V0L0 522 aa2.05□□□□□ -2.08
ECHDC1-219ENST00000526299 GLDNQ6ZMI3 551 aaPredicted RBP2.05□□□□□ -2.08
ECHDC1-219ENST00000526299 INTS8Q75QN2 995 aaKnown RBP2.05□□□□□ -2.08
ECHDC1-219ENST00000526299 TMEM139Q8IV31 216 aa2.05□□□□□ -2.08
ECHDC1-219ENST00000526299 FAM114A1Q8IWE2 563 aa2.05□□□□□ -2.08
ECHDC1-219ENST00000526299 TSPYL6Q8N831 410 aa2.05□□□□□ -2.08
ECHDC1-219ENST00000526299 PPFIBP2Q8ND30 876 aa2.05□□□□□ -2.08
ECHDC1-219ENST00000526299 OR13J1Q8NGT2 312 aa2.05□□□□□ -2.08
ECHDC1-219ENST00000526299 METTL6Q8TCB7 284 aa2.05□□□□□ -2.08
ECHDC1-219ENST00000526299 ATXN7L3BQ96GX2 97 aa2.05□□□□□ -2.08
ECHDC1-219ENST00000526299 PAIP1Q9H074 479 aaKnown RBP2.05□□□□□ -2.08
ECHDC1-219ENST00000526299 FGF21Q9NSA1 209 aa2.05□□□□□ -2.08
ECHDC1-219ENST00000526299 ANAPC11Q9NYG5 84 aa2.05□□□□□ -2.08
ECHDC1-219ENST00000526299 CACNG4Q9UBN1 327 aa2.05□□□□□ -2.08
ECHDC1-219ENST00000526299 PCDHGA5Q9Y5G8 931 aa2.05□□□□□ -2.08
ECHDC1-219ENST00000526299 STYXL1Q9Y6J8 313 aa2.05□□□□□ -2.08
ECHDC1-219ENST00000526299 KIF25-AS1Q9Y6Z4 181 aa2.05□□□□□ -2.08
ECHDC1-219ENST00000526299 LOC105371242A0A075B767 164 aa2.04□□□□□ -2.08
ECHDC1-219ENST00000526299 TO15178 435 aa2.04□□□□□ -2.08
ECHDC1-219ENST00000526299 EPHB6O15197 1021 aa2.04□□□□□ -2.08
ECHDC1-219ENST00000526299 SEC24AO95486 1093 aa2.04□□□□□ -2.08
ECHDC1-219ENST00000526299 IGHV4-31P0DP07 118 aa2.04□□□□□ -2.08
ECHDC1-219ENST00000526299 HSD3B1P14060 373 aa2.04□□□□□ -2.08
ECHDC1-219ENST00000526299 TMEM11P17152 192 aa2.04□□□□□ -2.08
ECHDC1-219ENST00000526299 RPL21P46778 160 aaKnown RBP2.04□□□□□ -2.08
ECHDC1-219ENST00000526299 CLCN4P51793 760 aa2.04□□□□□ -2.08
ECHDC1-219ENST00000526299 PDX1P52945 283 aa2.04□□□□□ -2.08
ECHDC1-219ENST00000526299 NIPAL4Q0D2K0 466 aa2.04□□□□□ -2.08
ECHDC1-219ENST00000526299 PNRC1Q12796 327 aaPredicted RBP2.04□□□□□ -2.08
ECHDC1-219ENST00000526299 PHLDA2Q53GA4 152 aa2.04□□□□□ -2.08
ECHDC1-219ENST00000526299 UMODL1Q5DID0 1318 aa2.04□□□□□ -2.08
ECHDC1-219ENST00000526299 GRTP1Q5TC63 336 aa2.04□□□□□ -2.08
ECHDC1-219ENST00000526299 GDPGP1Q6ZNW5 385 aa2.04□□□□□ -2.08
ECHDC1-219ENST00000526299 RTN4RL2Q86UN3 420 aa2.04□□□□□ -2.08
ECHDC1-219ENST00000526299 COMMD2Q86X83 199 aa2.04□□□□□ -2.08
ECHDC1-219ENST00000526299 CDK20Q8IZL9 346 aa2.04□□□□□ -2.08
ECHDC1-219ENST00000526299 RHOXF1Q8NHV9 184 aa2.04□□□□□ -2.08
ECHDC1-219ENST00000526299 NPRL2Q8WTW4 380 aa2.04□□□□□ -2.08
ECHDC1-219ENST00000526299 PHLDA1Q8WV24 401 aaPredicted RBP2.04□□□□□ -2.08
ECHDC1-219ENST00000526299 IRGQQ8WZA9 623 aa2.04□□□□□ -2.08
ECHDC1-219ENST00000526299 TUBB1Q9H4B7 451 aa2.04□□□□□ -2.08
ECHDC1-219ENST00000526299 GPN1Q9HCN4 374 aaPredicted RBP2.04□□□□□ -2.08
ECHDC1-219ENST00000526299 TNFRSF19Q9NS68 423 aa2.04□□□□□ -2.08
ECHDC1-219ENST00000526299 P4HTMQ9NXG6 502 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms