RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 RBM18Q96H35 190 aaKnown RBP13.46□□□□□ -0.25
LRRK1-202ENST00000525284 GAD1Q99259 594 aa13.46□□□□□ -0.25
LRRK1-202ENST00000525284 RAD9AQ99638 391 aa13.46□□□□□ -0.25
LRRK1-202ENST00000525284 RABL2BQ9UNT1 228 aa13.46□□□□□ -0.25
LRRK1-202ENST00000525284 CYP3A7-CYP3A51PA0A087WV96 503 aa13.46□□□□□ -0.26
LRRK1-202ENST00000525284 ZNF726A6NNF4 738 aa13.46□□□□□ -0.26
LRRK1-202ENST00000525284 H3BRB1 525 aa13.46□□□□□ -0.26
LRRK1-202ENST00000525284 M0QX08 132 aa13.46□□□□□ -0.26
LRRK1-202ENST00000525284 TGDSO95455 350 aa13.46□□□□□ -0.26
LRRK1-202ENST00000525284 ZNF35P13682 527 aa13.46□□□□□ -0.26
LRRK1-202ENST00000525284 PAX3P23760 479 aa13.46□□□□□ -0.26
LRRK1-202ENST00000525284 CYP3A7P24462 503 aa13.46□□□□□ -0.26
LRRK1-202ENST00000525284 ST3GAL4Q11206 333 aa13.46□□□□□ -0.26
LRRK1-202ENST00000525284 TBRG1Q3YBR2 411 aa13.46□□□□□ -0.26
LRRK1-202ENST00000525284 IFI44LQ53G44 452 aa13.46□□□□□ -0.26
LRRK1-202ENST00000525284 RFWD3Q6PCD5 774 aa13.46□□□□□ -0.26
LRRK1-202ENST00000525284 EGFL6Q8IUX8 553 aa13.46□□□□□ -0.26
LRRK1-202ENST00000525284 BBS1Q8NFJ9 593 aa13.46□□□□□ -0.26
LRRK1-202ENST00000525284 DQX1Q8TE96 717 aaKnown RBP13.46□□□□□ -0.26
LRRK1-202ENST00000525284 MEAF6Q9HAF1 191 aa13.46□□□□□ -0.26
LRRK1-202ENST00000525284 BRF2Q9HAW0 419 aa13.46□□□□□ -0.26
LRRK1-202ENST00000525284 BORCS7-ASMTA0A0B4J1R7 106 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 POLR1CO15160 346 aaPredicted RBP13.45□□□□□ -0.26
LRRK1-202ENST00000525284 GMPSP49915 693 aaPredicted RBP13.45□□□□□ -0.26
LRRK1-202ENST00000525284 OR7G2Q8NG99 324 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 GRHL3Q8TE85 626 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 PRDM12Q9H4Q4 367 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 PCDHGA8Q9Y5G5 932 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 SLC9A3R1O14745 358 aaPredicted RBP13.45□□□□□ -0.26
LRRK1-202ENST00000525284 KERAO60938 352 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 CLDN9O95484 217 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 AMHP03971 560 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 MYCLP1P12525 358 aaPredicted RBP13.45□□□□□ -0.26
LRRK1-202ENST00000525284 HTR2AP28223 471 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 GNG2P59768 71 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 CDKAL1Q5VV42 579 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 PAOXQ6QHF9 649 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 ELMOD2Q8IZ81 293 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 NINJ1Q92982 152 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 RNF157Q96PX1 679 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 DEFB129Q9H1M3 183 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 RCOR3Q9P2K3 495 aaPredicted RBP13.45□□□□□ -0.26
LRRK1-202ENST00000525284 NFASCO94856 1347 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 LCHNA4D1U4 455 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 SLC22A1O15245 554 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 SCELO95171 688 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 CCKBRP32239 447 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 GRIA1P42261 906 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 DUSP4Q13115 394 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 CLNKQ7Z7G1 428 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 C4orf19Q8IY42 314 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 PIAS4Q8N2W9 510 aaPredicted RBP13.45□□□□□ -0.26
LRRK1-202ENST00000525284 ZBTB45Q96K62 511 aaPredicted RBP13.45□□□□□ -0.26
LRRK1-202ENST00000525284 RANBP3Q9H6Z4 567 aaPredicted RBP13.45□□□□□ -0.26
LRRK1-202ENST00000525284 MYOZ2Q9NPC6 264 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 FZD3Q9NPG1 666 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 COPS7AQ9UBW8 275 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 SIGLEC16A6NMB1 481 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 PDLIM1O00151 329 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 TRAFD1O14545 582 aaPredicted RBP13.45□□□□□ -0.26
LRRK1-202ENST00000525284 UBXN7O94888 489 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 GPIP06744 558 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 CFL1P23528 166 aaKnown RBP13.45□□□□□ -0.26
LRRK1-202ENST00000525284 HECTD2Q5U5R9 776 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 PAMR1Q6UXH9 720 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 NAT16Q8N8M0 369 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 COX18Q8N8Q8 333 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 DNAAF1Q8NEP3 725 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 TRAPPC12Q8WVT3 735 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 FBXL8Q96CD0 374 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 C14orf105Q9NVL8 296 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 MAGEB17A8MXT2 336 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 FAM155BO75949 473 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 ITGAVP06756 1048 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 CAP2P40123 477 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 ALDH3B1P43353 468 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 CDK18Q07002 472 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 BNIP1Q12981 228 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 ATAT1Q5SQI0 421 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 DCST2Q5T1A1 773 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 SPATC1Q76KD6 591 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 DCSTAMPQ9H295 470 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 SEC61A2Q9H9S3 476 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 DDX4Q9NQI0 724 aaKnown RBP13.45□□□□□ -0.26
LRRK1-202ENST00000525284 KCNS2Q9ULS6 477 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 A8MVJ9 347 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 PSEN1P49768 467 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 CDH11P55287 796 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 PRR5P85299 388 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 WSCD1Q658N2 575 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 METTL7BQ6UX53 244 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 KIAA0895Q8NCT3 520 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 CPNE2Q96FN4 548 aaPredicted RBP13.45□□□□□ -0.26
LRRK1-202ENST00000525284 SENP8Q96LD8 212 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 TMEM39AQ9NV64 488 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 DNAJC28Q9NX36 388 aa13.45□□□□□ -0.26
LRRK1-202ENST00000525284 AGAP5A6NIR3 686 aa13.44□□□□□ -0.26
LRRK1-202ENST00000525284 F5H0A9 414 aaPredicted RBP13.44□□□□□ -0.26
LRRK1-202ENST00000525284 OR1F1O43749 312 aa13.44□□□□□ -0.26
LRRK1-202ENST00000525284 TGM6O95932 706 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 141.3 ms