RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 SPG21Q9NZD8 308 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 CDH7Q9ULB5 785 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 PAM16Q9Y3D7 125 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 PCDHGA1Q9Y5H4 931 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 TRPV2Q9Y5S1 764 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 NLRC5Q86WI3 1866 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 BOD1L1Q8NFC6 3051 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 GREB1Q4ZG55 1949 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 MGAQ8IWI9 3026 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 LRBAP50851 2863 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 KIAA1671Q9BY89 1806 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 C17orf113A0A1B0GUU1 675 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 BCLAF3A2AJT9 711 aaKnown RBP1.61□□□□□ -2.15
CD44-212ENST00000524922 MYBPHLA2RUH7 354 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 PABPN1LA6NDY0 278 aaKnown RBP1.61□□□□□ -2.15
CD44-212ENST00000524922 HMX3A6NHT5 357 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 SHISA7A6NL88 538 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 HIDE1A8MVS5 230 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 C16orf97H3BN30 126 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 IFNL4K9M1U5 179 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 FIBPO43427 364 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 EXTL3O43909 919 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 CHRNA1P02708 482 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 LGALS2P05162 132 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 SMIM10L2AP0DMW4 78 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 SMIM10L2BP0DMW5 78 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 HSPD1P10809 573 aaKnown RBP1.61□□□□□ -2.15
CD44-212ENST00000524922 KRT5P13647 590 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 PAX1P15863 534 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 UBA1P22314 1058 aaKnown RBP1.61□□□□□ -2.15
CD44-212ENST00000524922 PAX3P23760 479 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 CHATP28329 748 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 ADORA1P30542 326 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 KRT9P35527 623 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 ADD2P35612 726 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 BLKP51451 505 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 EFNA5P52803 228 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 CRYBB1P53674 252 aaPredicted RBP1.61□□□□□ -2.15
CD44-212ENST00000524922 RARSP54136 660 aaKnown RBP1.61□□□□□ -2.15
CD44-212ENST00000524922 NR1H2P55055 460 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 PITX1P78337 314 aaPredicted RBP1.61□□□□□ -2.15
CD44-212ENST00000524922 CSTF1Q05048 431 aaKnown RBP1.61□□□□□ -2.15
CD44-212ENST00000524922 FCHO2Q0JRZ9 810 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 ELAVL2Q12926 359 aaKnown RBP1.61□□□□□ -2.15
CD44-212ENST00000524922 ILKQ13418 452 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 LPAL2Q16609 132 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 SGO1Q5FBB7 561 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 STXBP5Q5T5C0 1151 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 GORABQ5T7V8 394 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 ZC2HC1BQ5TFG8 222 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 FAM122CQ6P4D5 195 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 WDR73Q6P4I2 378 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 MOB3CQ70IA8 216 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 SLC26A9Q7LBE3 791 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 RALGPS2Q86X27 583 aaPredicted RBP1.61□□□□□ -2.15
CD44-212ENST00000524922 SFR1Q86XK3 245 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 EXOC8Q8IYI6 725 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 SPICE1Q8N0Z3 855 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 ZNF843Q8N446 348 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 DCLK2Q8N568 766 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 PARP16Q8N5Y8 322 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 CNNM3Q8NE01 707 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 GJC3Q8NFK1 279 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 OR2AK2Q8NG84 335 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 OR13A1Q8NGR1 328 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 DUSP19Q8WTR2 217 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 HSPH1Q92598 858 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 ZNF707Q96C28 371 aaPredicted RBP1.61□□□□□ -2.15
CD44-212ENST00000524922 SPATA33Q96N06 139 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 F2RL3Q96RI0 385 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 RPS6KC1Q96S38 1066 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP1.61□□□□□ -2.15
CD44-212ENST00000524922 EDEM2Q9BV94 578 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 NACAP1Q9BZK3 213 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 LRRCC1Q9C099 1032 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 ZNF700Q9H0M5 742 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 SMARCAD1Q9H4L7 1026 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 RAVER2Q9HCJ3 691 aaKnown RBP1.61□□□□□ -2.15
CD44-212ENST00000524922 MKKSQ9NPJ1 570 aaPredicted RBP1.61□□□□□ -2.15
CD44-212ENST00000524922 TMEM9BQ9NQ34 198 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 ENTPD7Q9NQZ7 604 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 MRPL17Q9NRX2 175 aaKnown RBP1.61□□□□□ -2.15
CD44-212ENST00000524922 TUBE1Q9UJT0 475 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 POU2F3Q9UKI9 436 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 RALYQ9UKM9 306 aaKnown RBP1.61□□□□□ -2.15
CD44-212ENST00000524922 CCPG1Q9ULG6 757 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 VDAC3Q9Y277 283 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 DNAJC16Q9Y2G8 782 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 MRPL11Q9Y3B7 192 aaKnown RBP1.61□□□□□ -2.15
CD44-212ENST00000524922 DYNC1LI1Q9Y6G9 523 aaKnown RBP1.61□□□□□ -2.15
CD44-212ENST00000524922 ATG2AQ2TAZ0 1938 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 ZNFX1Q9P2E3 1918 aaKnown RBP1.61□□□□□ -2.15
CD44-212ENST00000524922 HIVEP3Q5T1R4 2406 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 ATRQ13535 2644 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 NFASCO94856 1347 aa1.61□□□□□ -2.15
CD44-212ENST00000524922 FN1P02751 2386 aaKnown RBP1.61□□□□□ -2.15
CD44-212ENST00000524922 NAV1Q8NEY1 1877 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 SPAG17Q6Q759 2223 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 NID2Q14112 1375 aa1.6□□□□□ -2.15
CD44-212ENST00000524922 DOCK8Q8NF50 2099 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms