RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 SPATA19Q7Z5L4 167 aa7.69□□□□□ -1.18
SPIDR-223ENST00000524033 SPPL2CQ8IUH8 684 aa7.69□□□□□ -1.18
SPIDR-223ENST00000524033 DHRSXQ8N5I4 330 aa7.69□□□□□ -1.18
SPIDR-223ENST00000524033 PTGR2Q8N8N7 351 aaPredicted RBP7.69□□□□□ -1.18
SPIDR-223ENST00000524033 SUMF1Q8NBK3 374 aa7.69□□□□□ -1.18
SPIDR-223ENST00000524033 ZBTB44Q8NCP5 570 aa7.69□□□□□ -1.18
SPIDR-223ENST00000524033 GABPB2Q8TAK5 448 aaPredicted RBP7.69□□□□□ -1.18
SPIDR-223ENST00000524033 CHPT1Q8WUD6 406 aa7.69□□□□□ -1.18
SPIDR-223ENST00000524033 OSCP1Q8WVF1 389 aa7.69□□□□□ -1.18
SPIDR-223ENST00000524033 PEX13Q92968 403 aa7.69□□□□□ -1.18
SPIDR-223ENST00000524033 ABTB1Q969K4 478 aaPredicted RBP7.69□□□□□ -1.18
SPIDR-223ENST00000524033 ACDQ96AP0 544 aa7.69□□□□□ -1.18
SPIDR-223ENST00000524033 RSPRY1Q96DX4 576 aa7.69□□□□□ -1.18
SPIDR-223ENST00000524033 PHF21BQ96EK2 531 aa7.69□□□□□ -1.18
SPIDR-223ENST00000524033 COX4I2Q96KJ9 171 aa7.69□□□□□ -1.18
SPIDR-223ENST00000524033 LRRC3BQ96PB8 259 aa7.69□□□□□ -1.18
SPIDR-223ENST00000524033 ACBD6Q9BR61 282 aa7.69□□□□□ -1.18
SPIDR-223ENST00000524033 SLC46A2Q9BY10 475 aa7.69□□□□□ -1.18
SPIDR-223ENST00000524033 FAM126AQ9BYI3 521 aaPredicted RBP7.69□□□□□ -1.18
SPIDR-223ENST00000524033 NAA50Q9GZZ1 169 aaKnown RBP7.69□□□□□ -1.18
SPIDR-223ENST00000524033 TFB2MQ9H5Q4 396 aaKnown RBP7.69□□□□□ -1.18
SPIDR-223ENST00000524033 ALG9Q9H6U8 611 aa7.69□□□□□ -1.18
SPIDR-223ENST00000524033 C8orf33Q9H7E9 229 aaPredicted RBP7.69□□□□□ -1.18
SPIDR-223ENST00000524033 GPN2Q9H9Y4 310 aaPredicted RBP7.69□□□□□ -1.18
SPIDR-223ENST00000524033 POLR1BQ9H9Y6 1135 aa7.69□□□□□ -1.18
SPIDR-223ENST00000524033 TBC1D23Q9NUY8 699 aa7.69□□□□□ -1.18
SPIDR-223ENST00000524033 NDFIP2Q9NV92 336 aa7.69□□□□□ -1.18
SPIDR-223ENST00000524033 RBM22Q9NW64 420 aaKnown RBP eCLIP7.69□□□□□ -1.18
SPIDR-223ENST00000524033 THG1LQ9NWX6 298 aaKnown RBP7.69□□□□□ -1.18
SPIDR-223ENST00000524033 ABI2Q9NYB9 513 aaPredicted RBP7.69□□□□□ -1.18
SPIDR-223ENST00000524033 GMIPQ9P107 970 aa7.69□□□□□ -1.18
SPIDR-223ENST00000524033 MARCH4Q9P2E8 410 aaPredicted RBP7.69□□□□□ -1.18
SPIDR-223ENST00000524033 GIMAP2Q9UG22 337 aa7.69□□□□□ -1.18
SPIDR-223ENST00000524033 ANAPC2Q9UJX6 822 aa7.69□□□□□ -1.18
SPIDR-223ENST00000524033 ATXN7L1Q9ULK2 861 aaPredicted RBP7.69□□□□□ -1.18
SPIDR-223ENST00000524033 PCDHB5Q9Y5E4 795 aa7.69□□□□□ -1.18
SPIDR-223ENST00000524033 PTGDR2Q9Y5Y4 395 aa7.69□□□□□ -1.18
SPIDR-223ENST00000524033 ST14Q9Y5Y6 855 aa7.69□□□□□ -1.18
SPIDR-223ENST00000524033 SLC30A1Q9Y6M5 507 aa7.69□□□□□ -1.18
SPIDR-223ENST00000524033 LAMA1P25391 3075 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 LOC285095A0A1B0GVY8 99 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 A0A1W2PP18 115 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 TYW5A2RUC4 315 aaKnown RBP7.68□□□□□ -1.18
SPIDR-223ENST00000524033 FAM149AA5PLN7 773 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 LRRC14BA6NHZ5 514 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 SLC38A8A6NNN8 435 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 BOLA2-SMG1P6H3BVE0 249 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 LDB2O43679 373 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 ATP6V1G1O75348 118 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 SULT1C4O75897 302 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 SUPT7LO94864 414 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 MT-CO1P00395 513 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 HPRP00739 348 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 FUCA1P04066 466 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 CHRNB1P11230 501 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 CDH1P12830 882 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 PORP16435 677 aaPredicted RBP7.68□□□□□ -1.18
SPIDR-223ENST00000524033 ZNF37AP17032 561 aaPredicted RBP7.68□□□□□ -1.18
SPIDR-223ENST00000524033 ATF6P18850 670 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 CHRM3P20309 590 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 TPP2P29144 1249 aaPredicted RBP7.68□□□□□ -1.18
SPIDR-223ENST00000524033 CXCL12P48061 93 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 SLC5A3P53794 718 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 PRAMEP78395 509 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 RELAQ04206 551 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 EMX2Q04743 252 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 TUBA3CQ13748 450 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 CCINQ13939 588 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 CAPRIN1Q14444 709 aaKnown RBP7.68□□□□□ -1.18
SPIDR-223ENST00000524033 TGFBIQ15582 683 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 OR4D1Q15615 310 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 NFE2Q16621 373 aaPredicted RBP7.68□□□□□ -1.18
SPIDR-223ENST00000524033 DDR2Q16832 855 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 VPS26BQ4G0F5 336 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 SETMARQ53H47 684 aaPredicted RBP7.68□□□□□ -1.18
SPIDR-223ENST00000524033 PYCR3Q53H96 274 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 GPR107Q5VW38 600 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 GTF2IRD2BQ6EKJ0 949 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 NANOGP8Q6NSW7 305 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 PRR23BQ6ZRT6 265 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 KCTD8Q6ZWB6 473 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 FKBP9P1Q75LS8 142 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 C14orf80Q86SX3 495 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 GTF2IRD2Q86UP8 949 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 PIM3Q86V86 326 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 RALGPS2Q86X27 583 aaPredicted RBP7.68□□□□□ -1.18
SPIDR-223ENST00000524033 DDIASQ8IXT1 998 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 UMODL1-AS1Q8N2C9 162 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 DPP10Q8N608 796 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 CELF5Q8N6W0 485 aaKnown RBP7.68□□□□□ -1.18
SPIDR-223ENST00000524033 ARRDC2Q8TBH0 407 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 GIPC3Q8TF64 312 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 SNRNP27Q8WVK2 155 aaKnown RBP7.68□□□□□ -1.18
SPIDR-223ENST00000524033 TRUB1Q8WWH5 349 aaKnown RBP7.68□□□□□ -1.18
SPIDR-223ENST00000524033 NELL1Q92832 810 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 PPWD1Q96BP3 646 aaKnown RBP7.68□□□□□ -1.18
SPIDR-223ENST00000524033 MSANTD3Q96H12 275 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 PLEKHA8Q96JA3 519 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 ZFYVE19Q96K21 471 aa7.68□□□□□ -1.18
SPIDR-223ENST00000524033 BTN2A3PQ96KV6 586 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms