RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 FAM45BPQ6NSW5 357 aa12.19□□□□□ -0.46
VEGFA-225ENST00000523950 FOXR1Q6PIV2 292 aa12.19□□□□□ -0.46
VEGFA-225ENST00000523950 BMPERQ8N8U9 685 aa12.19□□□□□ -0.46
VEGFA-225ENST00000523950 ZNF248Q8NDW4 579 aa12.19□□□□□ -0.46
VEGFA-225ENST00000523950 OR4E2Q8NGC2 313 aa12.19□□□□□ -0.46
VEGFA-225ENST00000523950 FAM45AQ8TCE6 357 aa12.19□□□□□ -0.46
VEGFA-225ENST00000523950 JPH3Q8WXH2 748 aaPredicted RBP12.19□□□□□ -0.46
VEGFA-225ENST00000523950 RAD51AP1Q96B01 352 aa12.19□□□□□ -0.46
VEGFA-225ENST00000523950 TEFMQ96QE5 360 aaKnown RBP12.19□□□□□ -0.46
VEGFA-225ENST00000523950 TAAR9Q96RI9 348 aa12.19□□□□□ -0.46
VEGFA-225ENST00000523950 ZPBPQ9BS86 351 aa12.19□□□□□ -0.46
VEGFA-225ENST00000523950 ASPSCR1Q9BZE9 553 aa12.19□□□□□ -0.46
VEGFA-225ENST00000523950 TWSG1Q9GZX9 223 aa12.19□□□□□ -0.46
VEGFA-225ENST00000523950 FBXO8Q9NRD0 319 aa12.19□□□□□ -0.46
VEGFA-225ENST00000523950 C1GALT1Q9NS00 363 aa12.19□□□□□ -0.46
VEGFA-225ENST00000523950 ZDHHC18Q9NUE0 388 aa12.19□□□□□ -0.46
VEGFA-225ENST00000523950 KLHL3Q9UH77 587 aa12.19□□□□□ -0.46
VEGFA-225ENST00000523950 POMT2Q9UKY4 750 aa12.19□□□□□ -0.46
VEGFA-225ENST00000523950 ZMIZ1Q9ULJ6 1067 aa12.19□□□□□ -0.46
VEGFA-225ENST00000523950 ICKQ9UPZ9 632 aa12.19□□□□□ -0.46
VEGFA-225ENST00000523950 MED16Q9Y2X0 877 aa12.19□□□□□ -0.46
VEGFA-225ENST00000523950 EFCAB7A8K855 629 aa12.18□□□□□ -0.46
VEGFA-225ENST00000523950 A8MU76 341 aa12.18□□□□□ -0.46
VEGFA-225ENST00000523950 C1orf105O95561 183 aa12.18□□□□□ -0.46
VEGFA-225ENST00000523950 FGF3P11487 239 aaPredicted RBP12.18□□□□□ -0.46
VEGFA-225ENST00000523950 HGFP14210 728 aa12.18□□□□□ -0.46
VEGFA-225ENST00000523950 ITIH1P19827 911 aa12.18□□□□□ -0.46
VEGFA-225ENST00000523950 GABRB3P28472 473 aa12.18□□□□□ -0.46
VEGFA-225ENST00000523950 MAGEA4P43358 317 aa12.18□□□□□ -0.46
VEGFA-225ENST00000523950 RGS4P49798 205 aa12.18□□□□□ -0.46
VEGFA-225ENST00000523950 MAPK10P53779 464 aa12.18□□□□□ -0.46
VEGFA-225ENST00000523950 MC2RQ01718 297 aa12.18□□□□□ -0.46
VEGFA-225ENST00000523950 ABRQ12979 859 aa12.18□□□□□ -0.46
VEGFA-225ENST00000523950 PRKG2Q13237 762 aa12.18□□□□□ -0.46
VEGFA-225ENST00000523950 ACSBG2Q5FVE4 666 aa12.18□□□□□ -0.46
VEGFA-225ENST00000523950 FAM92BQ6ZTR7 304 aa12.18□□□□□ -0.46
VEGFA-225ENST00000523950 FAM129CQ86XR2 697 aa12.18□□□□□ -0.46
VEGFA-225ENST00000523950 RELL1Q8IUW5 271 aa12.18□□□□□ -0.46
VEGFA-225ENST00000523950 CD200R1Q8TD46 325 aa12.18□□□□□ -0.46
VEGFA-225ENST00000523950 SKA2Q8WVK7 121 aaPredicted RBP12.18□□□□□ -0.46
VEGFA-225ENST00000523950 SLC41A2Q96JW4 573 aa12.18□□□□□ -0.46
VEGFA-225ENST00000523950 GPR21Q99679 349 aa12.18□□□□□ -0.46
VEGFA-225ENST00000523950 SIDT1Q9NXL6 827 aaKnown RBP12.18□□□□□ -0.46
VEGFA-225ENST00000523950 SPATA7Q9P0W8 599 aa12.18□□□□□ -0.46
VEGFA-225ENST00000523950 TRMT6Q9UJA5 497 aaKnown RBP12.18□□□□□ -0.46
VEGFA-225ENST00000523950 TDRKHQ9Y2W6 561 aaKnown RBP12.18□□□□□ -0.46
VEGFA-225ENST00000523950 PCDHB11Q9Y5F2 797 aa12.18□□□□□ -0.46
VEGFA-225ENST00000523950 ESYT3A0FGR9 886 aa12.17□□□□□ -0.46
VEGFA-225ENST00000523950 PIPSLA2A3N6 862 aa12.17□□□□□ -0.46
VEGFA-225ENST00000523950 GSAPA4D1B5 854 aa12.17□□□□□ -0.46
VEGFA-225ENST00000523950 PMS2P1A4D2B8 440 aa12.17□□□□□ -0.46
VEGFA-225ENST00000523950 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.17□□□□□ -0.46
VEGFA-225ENST00000523950 TAF4O00268 1085 aa12.17□□□□□ -0.46
VEGFA-225ENST00000523950 BTN3A3O00478 584 aa12.17□□□□□ -0.46
VEGFA-225ENST00000523950 BTN3A1O00481 513 aa12.17□□□□□ -0.46
VEGFA-225ENST00000523950 RASGRF2O14827 1237 aa12.17□□□□□ -0.46
VEGFA-225ENST00000523950 RRP8O43159 456 aaKnown RBP12.17□□□□□ -0.46
VEGFA-225ENST00000523950 TLX3O43711 291 aaPredicted RBP12.17□□□□□ -0.46
VEGFA-225ENST00000523950 PSIP1O75475 530 aaKnown RBP12.17□□□□□ -0.46
VEGFA-225ENST00000523950 FKBP9O95302 570 aa12.17□□□□□ -0.46
VEGFA-225ENST00000523950 ZBTB11O95625 1053 aaPredicted RBP12.17□□□□□ -0.46
VEGFA-225ENST00000523950 CATP04040 527 aaKnown RBP12.17□□□□□ -0.46
VEGFA-225ENST00000523950 CCL4P13236 92 aa12.17□□□□□ -0.46
VEGFA-225ENST00000523950 NELFEP18615 380 aaKnown RBP12.17□□□□□ -0.46
VEGFA-225ENST00000523950 POLR2CP19387 275 aaPredicted RBP12.17□□□□□ -0.46
VEGFA-225ENST00000523950 PKLRP30613 574 aa12.17□□□□□ -0.46
VEGFA-225ENST00000523950 SSTR1P30872 391 aa12.17□□□□□ -0.46
VEGFA-225ENST00000523950 STX2P32856 288 aa12.17□□□□□ -0.46
VEGFA-225ENST00000523950 EIF2S3P41091 472 aaKnown RBP12.17□□□□□ -0.46
VEGFA-225ENST00000523950 ETV5P41161 510 aa12.17□□□□□ -0.46
VEGFA-225ENST00000523950 KPNA2P52292 529 aaKnown RBP12.17□□□□□ -0.46
VEGFA-225ENST00000523950 NAB1Q13506 487 aa12.17□□□□□ -0.46
VEGFA-225ENST00000523950 CUL1Q13616 776 aa12.17□□□□□ -0.46
VEGFA-225ENST00000523950 KIR2DS3Q14952 304 aa12.17□□□□□ -0.46
VEGFA-225ENST00000523950 TRADDQ15628 312 aa12.17□□□□□ -0.46
VEGFA-225ENST00000523950 KLHL38Q2WGJ6 581 aa12.17□□□□□ -0.46
VEGFA-225ENST00000523950 DCAF12Q5T6F0 453 aa12.17□□□□□ -0.46
VEGFA-225ENST00000523950 CEACAM20Q6UY09 585 aa12.17□□□□□ -0.46
VEGFA-225ENST00000523950 C3orf62Q6ZUJ4 267 aa12.17□□□□□ -0.46
VEGFA-225ENST00000523950 STRA8Q7Z7C7 330 aa12.17□□□□□ -0.46
VEGFA-225ENST00000523950 BPHLQ86WA6 291 aaPredicted RBP12.17□□□□□ -0.46
VEGFA-225ENST00000523950 CCDC25Q86WR0 208 aa12.17□□□□□ -0.46
VEGFA-225ENST00000523950 ADGRF3Q8IZF5 1079 aa12.17□□□□□ -0.46
VEGFA-225ENST00000523950 SIDT2Q8NBJ9 832 aaKnown RBP12.17□□□□□ -0.46
VEGFA-225ENST00000523950 FBXO15Q8NCQ5 510 aaPredicted RBP12.17□□□□□ -0.46
VEGFA-225ENST00000523950 CFAP61Q8NHU2 1237 aa12.17□□□□□ -0.46
VEGFA-225ENST00000523950 GIMAP7Q8NHV1 300 aa12.17□□□□□ -0.46
VEGFA-225ENST00000523950 HMGCLL1Q8TB92 370 aa12.17□□□□□ -0.46
VEGFA-225ENST00000523950 USP7Q93009 1102 aa12.17□□□□□ -0.46
VEGFA-225ENST00000523950 SLC22A18Q96BI1 424 aa12.17□□□□□ -0.46
VEGFA-225ENST00000523950 FAM136AQ96C01 138 aa12.17□□□□□ -0.46
VEGFA-225ENST00000523950 NDNQ99608 321 aa12.17□□□□□ -0.46
VEGFA-225ENST00000523950 MAP3K3Q99759 626 aa12.17□□□□□ -0.46
VEGFA-225ENST00000523950 MENTQ9BUN1 341 aa12.17□□□□□ -0.46
VEGFA-225ENST00000523950 PITPNM3Q9BZ71 974 aa12.17□□□□□ -0.46
VEGFA-225ENST00000523950 DPH1Q9BZG8 443 aa12.17□□□□□ -0.46
VEGFA-225ENST00000523950 RHOJQ9H4E5 214 aa12.17□□□□□ -0.46
VEGFA-225ENST00000523950 L2HGDHQ9H9P8 463 aa12.17□□□□□ -0.46
VEGFA-225ENST00000523950 SYTL2Q9HCH5 934 aa12.17□□□□□ -0.46
VEGFA-225ENST00000523950 OCIAD1Q9NX40 245 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms