RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-223	ENST00000523636	MYO1F	O00160	1098 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	RNF103	O00237	685 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	HNRNPDL	O14979	420 aa	Known RBP	5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	MSH4	O15457	936 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	PHGDH	O43175	533 aa	Known RBP	5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	PPP6R2	O75170	966 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	GCNT3	O95395	438 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	SEMA4F	O95754	770 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	FTCD	O95954	541 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	CLEC3B	P05452	202 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	TPO	P07202	933 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	ZNF888	P0CJ79	500 aa	Predicted RBP	5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	PCNA	P12004	261 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	BRAF	P15056	766 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	GLRA2	P23416	452 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	DGKA	P23743	735 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	AARS	P49588	968 aa	Known RBP eCLIP	5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	LUM	P51884	338 aa	Predicted RBP	5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	MAP2K6	P52564	334 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	IRX1	P78414	480 aa	Predicted RBP	5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	CEBPZ	Q03701	1054 aa	Known RBP	5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	SLC39A14	Q15043	492 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	TRADD	Q15628	312 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	STK11	Q15831	433 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	CNGA2	Q16280	664 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	TPD52L1	Q16890	204 aa	Predicted RBP	5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	KRTAP19-4	Q3LI73	84 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	C3orf36	Q3SXR2	165 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	MGAT5B	Q3V5L5	792 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	ZNF568	Q3ZCX4	644 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	NADK2	Q4G0N4	442 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	GAGE13	Q4V321	117 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	HSP90AA5P	Q58FG0	334 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	MIIP	Q5JXC2	388 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	MPP7	Q5T2T1	576 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	ERMARD	Q5T6L9	678 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	ATP1A1-AS1	Q5TC04	95 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	SLC25A24	Q6NUK1	477 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	TCTN3	Q6NUS6	607 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	FAM173B	Q6P4H8	233 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	GUSBP11	Q6P575	273 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	PET117	Q6UWS5	81 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	MARK2	Q7KZI7	788 aa	Known RBP	5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	BNIPL	Q7Z465	357 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	TRIM74	Q86UV6	250 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	TRIM73	Q86UV7	250 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	LUZP1	Q86V48	1076 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	TMEM25	Q86YD3	366 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	CDH26	Q8IXH8	852 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	KBTBD2	Q8IY47	623 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	MB21D2	Q8IYB1	491 aa	Predicted RBP	5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	DIS3L2	Q8IYB7	885 aa	Known RBP	5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	CCDC13	Q8IYE1	715 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	SLC7A5P1	Q8MH63	180 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	SLC4A11	Q8NBS3	891 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	PLA2G15	Q8NCC3	412 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	GCDH	Q92947	438 aa	Predicted RBP	5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	GRAMD1A	Q96CP6	724 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	C19orf60	Q96EN9	201 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	PDLIM5	Q96HC4	596 aa	Known RBP	5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	DHTKD1	Q96HY7	919 aa	Predicted RBP	5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	CCDC106	Q9BWC9	280 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	NFKBIZ	Q9BYH8	718 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	LRRC2	Q9BYS8	371 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	ISCU	Q9H1K1	167 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	HSD3B7	Q9H2F3	369 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	CXXC4	Q9H2H0	198 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	SLC6A15	Q9H2J7	730 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	GDF3	Q9NR23	364 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	SELENON	Q9NZV5	590 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	CWC15	Q9P013	229 aa	Known RBP	5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	FETUB	Q9UGM5	382 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	PCDHA7	Q9UN72	937 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	POMT1	Q9Y6A1	747 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	FER1L5	A0AVI2	2057 aa		5.08	□□□□□ -1.6
PABPC1-223	ENST00000523636	OR6C75	A6NL08	312 aa		5.07	□□□□□ -1.6
PABPC1-223	ENST00000523636	EFCAB7	A8K855	629 aa		5.07	□□□□□ -1.6
PABPC1-223	ENST00000523636	PIP5K1B	O14986	540 aa		5.07	□□□□□ -1.6
PABPC1-223	ENST00000523636	CETN3	O15182	167 aa		5.07	□□□□□ -1.6
PABPC1-223	ENST00000523636	ASNA1	O43681	348 aa		5.07	□□□□□ -1.6
PABPC1-223	ENST00000523636	ZG16	O60844	167 aa		5.07	□□□□□ -1.6
PABPC1-223	ENST00000523636	PSMD10	O75832	226 aa		5.07	□□□□□ -1.6
PABPC1-223	ENST00000523636	NOL4	O94818	638 aa		5.07	□□□□□ -1.6
PABPC1-223	ENST00000523636	CTDNEP1	O95476	244 aa		5.07	□□□□□ -1.6
PABPC1-223	ENST00000523636	METTL18	O95568	372 aa		5.07	□□□□□ -1.6
PABPC1-223	ENST00000523636	PLG	P00747	810 aa	Predicted RBP	5.07	□□□□□ -1.6
PABPC1-223	ENST00000523636	TK1	P04183	234 aa		5.07	□□□□□ -1.6
PABPC1-223	ENST00000523636	CISD3	P0C7P0	127 aa		5.07	□□□□□ -1.6
PABPC1-223	ENST00000523636	PRR35	P0CG20	571 aa		5.07	□□□□□ -1.6
PABPC1-223	ENST00000523636	TPBGL	P0DKB5	382 aa		5.07	□□□□□ -1.6
PABPC1-223	ENST00000523636	HAPLN1	P10915	354 aa	Predicted RBP	5.07	□□□□□ -1.6
PABPC1-223	ENST00000523636	PRLR	P16471	622 aa		5.07	□□□□□ -1.6
PABPC1-223	ENST00000523636	TYMP	P19971	482 aa		5.07	□□□□□ -1.6
PABPC1-223	ENST00000523636	CCNA2	P20248	432 aa		5.07	□□□□□ -1.6
PABPC1-223	ENST00000523636	ITGA3	P26006	1051 aa		5.07	□□□□□ -1.6
PABPC1-223	ENST00000523636	CD38	P28907	300 aa		5.07	□□□□□ -1.6
PABPC1-223	ENST00000523636	SLC7A1	P30825	629 aa		5.07	□□□□□ -1.6
PABPC1-223	ENST00000523636	KIR2DL3	P43628	341 aa		5.07	□□□□□ -1.6
PABPC1-223	ENST00000523636	LEPR	P48357	1165 aa	Known RBP	5.07	□□□□□ -1.6

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