RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 CDC14CA4D256 554 aa18.08■□□□□ 0.48
SPIDR-220ENST00000522900 GOLGA8KD6RF30 607 aa18.08■□□□□ 0.48
SPIDR-220ENST00000522900 GOLGA8TH3BQL2 631 aa18.08■□□□□ 0.48
SPIDR-220ENST00000522900 PRMT5O14744 637 aaPredicted RBP18.08■□□□□ 0.48
SPIDR-220ENST00000522900 HCRTR1O43613 425 aa18.08■□□□□ 0.48
SPIDR-220ENST00000522900 CPNE3O75131 537 aaKnown RBP18.08■□□□□ 0.48
SPIDR-220ENST00000522900 VAPBO95292 243 aa18.08■□□□□ 0.48
SPIDR-220ENST00000522900 CHRM5P08912 532 aaPredicted RBP18.08■□□□□ 0.48
SPIDR-220ENST00000522900 TPSB2P20231 275 aa18.08■□□□□ 0.48
SPIDR-220ENST00000522900 AOAHP28039 575 aa18.08■□□□□ 0.48
SPIDR-220ENST00000522900 SHMT2P34897 504 aa18.08■□□□□ 0.48
SPIDR-220ENST00000522900 PPARGP37231 505 aaPredicted RBP18.08■□□□□ 0.48
SPIDR-220ENST00000522900 GPS1Q13098 491 aa18.08■□□□□ 0.48
SPIDR-220ENST00000522900 KCNJ11Q14654 390 aa18.08■□□□□ 0.48
SPIDR-220ENST00000522900 TPSAB1Q15661 275 aa18.08■□□□□ 0.48
SPIDR-220ENST00000522900 ZIC1Q15915 447 aa18.08■□□□□ 0.48
SPIDR-220ENST00000522900 AARS2Q5JTZ9 985 aaKnown RBP18.08■□□□□ 0.48
SPIDR-220ENST00000522900 PLEKHS1Q5SXH7 462 aa18.08■□□□□ 0.48
SPIDR-220ENST00000522900 ANKRD22Q5VYY1 191 aa18.08■□□□□ 0.48
SPIDR-220ENST00000522900 PTRH1Q86Y79 214 aaKnown RBP18.08■□□□□ 0.48
SPIDR-220ENST00000522900 MPP5Q8N3R9 675 aa18.08■□□□□ 0.48
SPIDR-220ENST00000522900 CFAP61Q8NHU2 1237 aa18.08■□□□□ 0.48
SPIDR-220ENST00000522900 MR1Q95460 341 aa18.08■□□□□ 0.48
SPIDR-220ENST00000522900 MAGOHBQ96A72 148 aaKnown RBP18.08■□□□□ 0.48
SPIDR-220ENST00000522900 TRIM56Q9BRZ2 755 aaKnown RBP18.08■□□□□ 0.48
SPIDR-220ENST00000522900 TWSG1Q9GZX9 223 aa18.08■□□□□ 0.48
SPIDR-220ENST00000522900 ACTL8Q9H568 366 aa18.08■□□□□ 0.48
SPIDR-220ENST00000522900 HEMK1Q9Y5R4 338 aaPredicted RBP18.08■□□□□ 0.48
SPIDR-220ENST00000522900 KCNMB2Q9Y691 235 aa18.08■□□□□ 0.48
SPIDR-220ENST00000522900 HELZ2Q9BYK8 2649 aaKnown RBP18.07■□□□□ 0.48
SPIDR-220ENST00000522900 C21orf140B9A014 251 aa18.07■□□□□ 0.48
SPIDR-220ENST00000522900 AP3B1O00203 1094 aa18.07■□□□□ 0.48
SPIDR-220ENST00000522900 SUV39H1O43463 412 aa18.07■□□□□ 0.48
SPIDR-220ENST00000522900 KRT14P02533 472 aa18.07■□□□□ 0.48
SPIDR-220ENST00000522900 PEBP1P30086 187 aaKnown RBP18.07■□□□□ 0.48
SPIDR-220ENST00000522900 TTPAP49638 278 aa18.07■□□□□ 0.48
SPIDR-220ENST00000522900 CDK16Q00536 496 aa18.07■□□□□ 0.48
SPIDR-220ENST00000522900 PTRHD1Q6GMV3 140 aaKnown RBP18.07■□□□□ 0.48
SPIDR-220ENST00000522900 ZNF517Q6ZMY9 492 aaPredicted RBP18.07■□□□□ 0.48
SPIDR-220ENST00000522900 CAND1Q86VP6 1230 aaKnown RBP18.07■□□□□ 0.48
SPIDR-220ENST00000522900 FAM20CQ8IXL6 584 aa18.07■□□□□ 0.48
SPIDR-220ENST00000522900 COG1Q8WTW3 980 aa18.07■□□□□ 0.48
SPIDR-220ENST00000522900 ASZ1Q8WWH4 475 aa18.07■□□□□ 0.48
SPIDR-220ENST00000522900 CHST8Q9H2A9 424 aa18.07■□□□□ 0.48
SPIDR-220ENST00000522900 GRPEL1Q9HAV7 217 aa18.07■□□□□ 0.48
SPIDR-220ENST00000522900 ZNF71Q9NQZ8 489 aaPredicted RBP18.07■□□□□ 0.48
SPIDR-220ENST00000522900 SOX13Q9UN79 622 aa18.07■□□□□ 0.48
SPIDR-220ENST00000522900 NEU2Q9Y3R4 380 aa18.07■□□□□ 0.48
SPIDR-220ENST00000522900 COL6A6A6NMZ7 2263 aa18.07■□□□□ 0.48
SPIDR-220ENST00000522900 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.06■□□□□ 0.48
SPIDR-220ENST00000522900 F8W8V4 182 aa18.06■□□□□ 0.48
SPIDR-220ENST00000522900 MEN1O00255 615 aa18.06■□□□□ 0.48
SPIDR-220ENST00000522900 NDUFS3O75489 264 aa18.06■□□□□ 0.48
SPIDR-220ENST00000522900 SLCO2B1O94956 709 aa18.06■□□□□ 0.48
SPIDR-220ENST00000522900 CTSBP07858 339 aa18.06■□□□□ 0.48
SPIDR-220ENST00000522900 MSL3P1P0C860 447 aa18.06■□□□□ 0.48
SPIDR-220ENST00000522900 PTPN4P29074 926 aa18.06■□□□□ 0.48
SPIDR-220ENST00000522900 MAGEA6P43360 314 aa18.06■□□□□ 0.48
SPIDR-220ENST00000522900 GRB7Q14451 532 aa18.06■□□□□ 0.48
SPIDR-220ENST00000522900 DNAJC21Q5F1R6 531 aaKnown RBP18.06■□□□□ 0.48
SPIDR-220ENST00000522900 FAM69BQ5VUD6 431 aa18.06■□□□□ 0.48
SPIDR-220ENST00000522900 DSELQ8IZU8 1212 aa18.06■□□□□ 0.48
SPIDR-220ENST00000522900 SLC35F6Q8N357 371 aa18.06■□□□□ 0.48
SPIDR-220ENST00000522900 C2orf73Q8N5S3 287 aaPredicted RBP18.06■□□□□ 0.48
SPIDR-220ENST00000522900 ABHD17AQ96GS6 310 aa18.06■□□□□ 0.48
SPIDR-220ENST00000522900 PBKQ96KB5 322 aa18.06■□□□□ 0.48
SPIDR-220ENST00000522900 MENTQ9BUN1 341 aa18.06■□□□□ 0.48
SPIDR-220ENST00000522900 TSSK1BQ9BXA7 367 aa18.06■□□□□ 0.48
SPIDR-220ENST00000522900 FANCEQ9HB96 536 aa18.06■□□□□ 0.48
SPIDR-220ENST00000522900 MRM3Q9HC36 420 aaKnown RBP18.06■□□□□ 0.48
SPIDR-220ENST00000522900 OR6C2Q9NZP2 312 aa18.06■□□□□ 0.48
SPIDR-220ENST00000522900 TUBD1Q9UJT1 453 aa18.06■□□□□ 0.48
SPIDR-220ENST00000522900 SERTAD3Q9UJW9 196 aa18.06■□□□□ 0.48
SPIDR-220ENST00000522900 FARSAQ9Y285 508 aaKnown RBP18.06■□□□□ 0.48
SPIDR-220ENST00000522900 TENM4Q6N022 2769 aa18.06■□□□□ 0.48
SPIDR-220ENST00000522900 ISM1B1AKI9 464 aa18.05■□□□□ 0.48
SPIDR-220ENST00000522900 TMEM63AO94886 807 aa18.05■□□□□ 0.48
SPIDR-220ENST00000522900 APOA4P06727 396 aa18.05■□□□□ 0.48
SPIDR-220ENST00000522900 CYP2A7P20853 494 aa18.05■□□□□ 0.48
SPIDR-220ENST00000522900 PKLRP30613 574 aa18.05■□□□□ 0.48
SPIDR-220ENST00000522900 RORAP35398 523 aa18.05■□□□□ 0.48
SPIDR-220ENST00000522900 COILP38432 576 aaPredicted RBP18.05■□□□□ 0.48
SPIDR-220ENST00000522900 GABRA4P48169 554 aa18.05■□□□□ 0.48
SPIDR-220ENST00000522900 EIF3BP55884 814 aaKnown RBP18.05■□□□□ 0.48
SPIDR-220ENST00000522900 KYNUQ16719 465 aa18.05■□□□□ 0.48
SPIDR-220ENST00000522900 DEFB110Q30KQ9 67 aa18.05■□□□□ 0.48
SPIDR-220ENST00000522900 CTSL3PQ5NE16 218 aa18.05■□□□□ 0.48
SPIDR-220ENST00000522900 HOOK3Q86VS8 718 aa18.05■□□□□ 0.48
SPIDR-220ENST00000522900 OTUD6BQ8N6M0 293 aa18.05■□□□□ 0.48
SPIDR-220ENST00000522900 C19orf47Q8N9M1 422 aaKnown RBP18.05■□□□□ 0.48
SPIDR-220ENST00000522900 LINC01555Q8NAE3 123 aa18.05■□□□□ 0.48
SPIDR-220ENST00000522900 CPT1BQ92523 772 aa18.05■□□□□ 0.48
SPIDR-220ENST00000522900 CLIP3Q96DZ5 547 aa18.05■□□□□ 0.48
SPIDR-220ENST00000522900 LRFN5Q96NI6 719 aa18.05■□□□□ 0.48
SPIDR-220ENST00000522900 BIRC8Q96P09 236 aa18.05■□□□□ 0.48
SPIDR-220ENST00000522900 IL17FQ96PD4 163 aa18.05■□□□□ 0.48
SPIDR-220ENST00000522900 GPR87Q9BY21 358 aa18.05■□□□□ 0.48
SPIDR-220ENST00000522900 TRIM4Q9C037 500 aa18.05■□□□□ 0.48
SPIDR-220ENST00000522900 SPRTNQ9H040 489 aaPredicted RBP18.05■□□□□ 0.48
SPIDR-220ENST00000522900 ACTR5Q9H9F9 607 aaPredicted RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 750.8 ms