RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 RAMP2O60895 175 aa6.22□□□□□ -1.41
VPS13B-211ENST00000522802 PLATP00750 562 aa6.22□□□□□ -1.41
VPS13B-211ENST00000522802 MYL1P05976 194 aa6.22□□□□□ -1.41
VPS13B-211ENST00000522802 TNFAIP3P21580 790 aa6.22□□□□□ -1.41
VPS13B-211ENST00000522802 LGALS4P56470 323 aa6.22□□□□□ -1.41
VPS13B-211ENST00000522802 KRTAP10-9P60411 292 aa6.22□□□□□ -1.41
VPS13B-211ENST00000522802 CDK3Q00526 305 aa6.22□□□□□ -1.41
VPS13B-211ENST00000522802 APBA1Q02410 837 aa6.22□□□□□ -1.41
VPS13B-211ENST00000522802 HHEXQ03014 270 aa6.22□□□□□ -1.41
VPS13B-211ENST00000522802 RAD51Q06609 339 aa6.22□□□□□ -1.41
VPS13B-211ENST00000522802 CD69Q07108 199 aa6.22□□□□□ -1.41
VPS13B-211ENST00000522802 ITKQ08881 620 aa6.22□□□□□ -1.41
VPS13B-211ENST00000522802 ACOX1Q15067 660 aa6.22□□□□□ -1.41
VPS13B-211ENST00000522802 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.22□□□□□ -1.41
VPS13B-211ENST00000522802 SLC25A52Q3SY17 297 aa6.22□□□□□ -1.41
VPS13B-211ENST00000522802 CFAP58Q5T655 872 aa6.22□□□□□ -1.41
VPS13B-211ENST00000522802 FAM199XQ6PEV8 388 aaPredicted RBP6.22□□□□□ -1.41
VPS13B-211ENST00000522802 GJB7Q6PEY0 223 aa6.22□□□□□ -1.41
VPS13B-211ENST00000522802 BRAT1Q6PJG6 821 aa6.22□□□□□ -1.41
VPS13B-211ENST00000522802 DPPA4Q7L190 304 aa6.22□□□□□ -1.41
VPS13B-211ENST00000522802 BNIPLQ7Z465 357 aa6.22□□□□□ -1.41
VPS13B-211ENST00000522802 ZNF354CQ86Y25 554 aa6.22□□□□□ -1.41
VPS13B-211ENST00000522802 RASGRP3Q8IV61 690 aa6.22□□□□□ -1.41
VPS13B-211ENST00000522802 RHOT1Q8IXI2 618 aa6.22□□□□□ -1.41
VPS13B-211ENST00000522802 ZNF397Q8NF99 534 aaPredicted RBP6.22□□□□□ -1.41
VPS13B-211ENST00000522802 UBE2Q2Q8WVN8 375 aa6.22□□□□□ -1.41
VPS13B-211ENST00000522802 THAP4Q8WY91 577 aa6.22□□□□□ -1.41
VPS13B-211ENST00000522802 CFHR4Q92496 578 aa6.22□□□□□ -1.41
VPS13B-211ENST00000522802 RAX2Q96IS3 184 aa6.22□□□□□ -1.41
VPS13B-211ENST00000522802 COQ10AQ96MF6 247 aa6.22□□□□□ -1.41
VPS13B-211ENST00000522802 CFAP57Q96MR6 1250 aa6.22□□□□□ -1.41
VPS13B-211ENST00000522802 TBC1D10AQ9BXI6 508 aa6.22□□□□□ -1.41
VPS13B-211ENST00000522802 SCAND2PQ9GZW5 306 aaPredicted RBP6.22□□□□□ -1.41
VPS13B-211ENST00000522802 MAGEH1Q9H213 219 aa6.22□□□□□ -1.41
VPS13B-211ENST00000522802 UPF2Q9HAU5 1272 aaKnown RBP6.22□□□□□ -1.41
VPS13B-211ENST00000522802 LHX9Q9NQ69 397 aa6.22□□□□□ -1.41
VPS13B-211ENST00000522802 PHPT1Q9NRX4 125 aaPredicted RBP6.22□□□□□ -1.41
VPS13B-211ENST00000522802 TMEM248Q9NWD8 314 aa6.22□□□□□ -1.41
VPS13B-211ENST00000522802 OGFRQ9NZT2 677 aa6.22□□□□□ -1.41
VPS13B-211ENST00000522802 PPP4R1LQ9P1A2 415 aa6.22□□□□□ -1.41
VPS13B-211ENST00000522802 STAP1Q9ULZ2 295 aa6.22□□□□□ -1.41
VPS13B-211ENST00000522802 HPCAL4Q9UM19 191 aa6.22□□□□□ -1.41
VPS13B-211ENST00000522802 PHTF1Q9UMS5 762 aa6.22□□□□□ -1.41
VPS13B-211ENST00000522802 MDC1Q14676 2089 aaKnown RBP6.21□□□□□ -1.41
VPS13B-211ENST00000522802 GOLGA6CA6NDK9 693 aa6.21□□□□□ -1.42
VPS13B-211ENST00000522802 GOLGA6BA6NDN3 693 aa6.21□□□□□ -1.42
VPS13B-211ENST00000522802 ZNF185O15231 689 aa6.21□□□□□ -1.42
VPS13B-211ENST00000522802 DAPK3O43293 454 aa6.21□□□□□ -1.42
VPS13B-211ENST00000522802 KIF1CO43896 1103 aaKnown RBP6.21□□□□□ -1.42
VPS13B-211ENST00000522802 NRP2O60462 931 aa6.21□□□□□ -1.42
VPS13B-211ENST00000522802 SPAG6O75602 509 aa6.21□□□□□ -1.42
VPS13B-211ENST00000522802 SOD1P00441 154 aa6.21□□□□□ -1.42
VPS13B-211ENST00000522802 C9P02748 559 aa6.21□□□□□ -1.42
VPS13B-211ENST00000522802 IVLP07476 585 aa6.21□□□□□ -1.42
VPS13B-211ENST00000522802 GOLGA6DP0CG33 693 aa6.21□□□□□ -1.42
VPS13B-211ENST00000522802 PTPN4P29074 926 aa6.21□□□□□ -1.42
VPS13B-211ENST00000522802 PTGER4P35408 488 aa6.21□□□□□ -1.42
VPS13B-211ENST00000522802 PRCPP42785 496 aa6.21□□□□□ -1.42
VPS13B-211ENST00000522802 NDST2P52849 883 aa6.21□□□□□ -1.42
VPS13B-211ENST00000522802 PTPRRQ15256 657 aa6.21□□□□□ -1.42
VPS13B-211ENST00000522802 CYTH1Q15438 398 aa6.21□□□□□ -1.42
VPS13B-211ENST00000522802 CNGA3Q16281 694 aa6.21□□□□□ -1.42
VPS13B-211ENST00000522802 C2CD6Q53TS8 623 aa6.21□□□□□ -1.42
VPS13B-211ENST00000522802 CRB2Q5IJ48 1285 aa6.21□□□□□ -1.42
VPS13B-211ENST00000522802 FAM102AQ5T9C2 384 aaPredicted RBP6.21□□□□□ -1.42
VPS13B-211ENST00000522802 AFMIDQ63HM1 303 aa6.21□□□□□ -1.42
VPS13B-211ENST00000522802 DENND2CQ68D51 928 aa6.21□□□□□ -1.42
VPS13B-211ENST00000522802 MARK2Q7KZI7 788 aaKnown RBP6.21□□□□□ -1.42
VPS13B-211ENST00000522802 SYVN1Q86TM6 617 aa6.21□□□□□ -1.42
VPS13B-211ENST00000522802 DNAAF5Q86Y56 855 aa6.21□□□□□ -1.42
VPS13B-211ENST00000522802 ZGRF1Q86YA3 2104 aa6.21□□□□□ -1.42
VPS13B-211ENST00000522802 ECHDC3Q96DC8 303 aa6.21□□□□□ -1.42
VPS13B-211ENST00000522802 NEIL1Q96FI4 390 aaPredicted RBP6.21□□□□□ -1.42
VPS13B-211ENST00000522802 C9orf72Q96LT7 481 aa6.21□□□□□ -1.42
VPS13B-211ENST00000522802 NSMCE3Q96MG7 304 aa6.21□□□□□ -1.42
VPS13B-211ENST00000522802 TGM7Q96PF1 710 aa6.21□□□□□ -1.42
VPS13B-211ENST00000522802 BARD1Q99728 777 aaKnown RBP6.21□□□□□ -1.42
VPS13B-211ENST00000522802 SSBP3Q9BWW4 388 aaPredicted RBP6.21□□□□□ -1.42
VPS13B-211ENST00000522802 MEGF9Q9H1U4 602 aa6.21□□□□□ -1.42
VPS13B-211ENST00000522802 SYNCQ9H7C4 482 aa6.21□□□□□ -1.42
VPS13B-211ENST00000522802 PDFQ9HBH1 243 aa6.21□□□□□ -1.42
VPS13B-211ENST00000522802 GOLGA6AQ9NYA3 693 aa6.21□□□□□ -1.42
VPS13B-211ENST00000522802 GPR83Q9NYM4 423 aa6.21□□□□□ -1.42
VPS13B-211ENST00000522802 TBC1D29Q9UFV1 150 aa6.21□□□□□ -1.42
VPS13B-211ENST00000522802 OR12D3Q9UGF7 316 aa6.21□□□□□ -1.42
VPS13B-211ENST00000522802 TRHDEQ9UKU6 1024 aa6.21□□□□□ -1.42
VPS13B-211ENST00000522802 PADI1Q9ULC6 663 aa6.21□□□□□ -1.42
VPS13B-211ENST00000522802 EDARQ9UNE0 448 aa6.21□□□□□ -1.42
VPS13B-211ENST00000522802 OSGIN2Q9Y236 505 aa6.21□□□□□ -1.42
VPS13B-211ENST00000522802 HPSEQ9Y251 543 aa6.21□□□□□ -1.42
VPS13B-211ENST00000522802 B3GNT3Q9Y2A9 372 aa6.21□□□□□ -1.42
VPS13B-211ENST00000522802 TMEM98Q9Y2Y6 226 aa6.21□□□□□ -1.42
VPS13B-211ENST00000522802 ACANP16112 2415 aa6.2□□□□□ -1.42
VPS13B-211ENST00000522802 PCM1Q15154 2024 aa6.2□□□□□ -1.42
VPS13B-211ENST00000522802 A0A0U1RQS6 177 aa6.2□□□□□ -1.42
VPS13B-211ENST00000522802 HEATR9A2RTY3 570 aa6.2□□□□□ -1.42
VPS13B-211ENST00000522802 CFAP69A5D8W1 941 aa6.2□□□□□ -1.42
VPS13B-211ENST00000522802 RASA4BC9J798 803 aa6.2□□□□□ -1.42
VPS13B-211ENST00000522802 PMM2O15305 246 aa6.2□□□□□ -1.42
VPS13B-211ENST00000522802 RASA4O43374 803 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms