RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 PTGR2Q8N8N7 351 aaPredicted RBP13.03□□□□□ -0.32
CLK4-210ENST00000522136 RDH11Q8TC12 318 aa13.03□□□□□ -0.32
CLK4-210ENST00000522136 PKP4Q99569 1192 aa13.03□□□□□ -0.32
CLK4-210ENST00000522136 EGFL8Q99944 293 aa13.03□□□□□ -0.32
CLK4-210ENST00000522136 HGH1Q9BTY7 390 aa13.03□□□□□ -0.32
CLK4-210ENST00000522136 TRIM54Q9BYV2 358 aa13.03□□□□□ -0.32
CLK4-210ENST00000522136 GAREM1Q9H706 876 aa13.03□□□□□ -0.32
CLK4-210ENST00000522136 RDH14Q9HBH5 336 aa13.03□□□□□ -0.32
CLK4-210ENST00000522136 FAM86C1Q9NVL1 165 aa13.03□□□□□ -0.32
CLK4-210ENST00000522136 ARL15Q9NXU5 204 aa13.03□□□□□ -0.32
CLK4-210ENST00000522136 NCKIPSDQ9NZQ3 722 aa13.03□□□□□ -0.32
CLK4-210ENST00000522136 DOLKQ9UPQ8 538 aa13.03□□□□□ -0.32
CLK4-210ENST00000522136 ARID1BQ8NFD5 2236 aaPredicted RBP13.03□□□□□ -0.32
CLK4-210ENST00000522136 B4DGG1 531 aa13.03□□□□□ -0.32
CLK4-210ENST00000522136 SMIM24O75264 130 aa13.03□□□□□ -0.32
CLK4-210ENST00000522136 SIX3O95343 332 aaPredicted RBP13.03□□□□□ -0.32
CLK4-210ENST00000522136 MTHFD1P11586 935 aaKnown RBP13.03□□□□□ -0.32
CLK4-210ENST00000522136 BGNP21810 368 aa13.03□□□□□ -0.32
CLK4-210ENST00000522136 DPP6P42658 865 aa13.03□□□□□ -0.32
CLK4-210ENST00000522136 RXRGP48443 463 aa13.03□□□□□ -0.32
CLK4-210ENST00000522136 ZNF423Q2M1K9 1284 aa13.03□□□□□ -0.32
CLK4-210ENST00000522136 ZXDCQ2QGD7 858 aaPredicted RBP13.03□□□□□ -0.32
CLK4-210ENST00000522136 RPS27LQ71UM5 84 aaKnown RBP13.03□□□□□ -0.32
CLK4-210ENST00000522136 RABEPKQ7Z6M1 372 aa13.03□□□□□ -0.32
CLK4-210ENST00000522136 GKN2Q86XP6 184 aa13.03□□□□□ -0.32
CLK4-210ENST00000522136 GATAD2AQ86YP4 633 aa13.03□□□□□ -0.32
CLK4-210ENST00000522136 SUMF1Q8NBK3 374 aa13.03□□□□□ -0.32
CLK4-210ENST00000522136 OR5K2Q8NHB8 316 aa13.03□□□□□ -0.32
CLK4-210ENST00000522136 ZDHHC1Q8WTX9 485 aa13.03□□□□□ -0.32
CLK4-210ENST00000522136 DYDC1Q8WWB3 177 aa13.03□□□□□ -0.32
CLK4-210ENST00000522136 IL17FQ96PD4 163 aa13.03□□□□□ -0.32
CLK4-210ENST00000522136 OXSMQ9NWU1 459 aa13.03□□□□□ -0.32
CLK4-210ENST00000522136 NUDT4Q9NZJ9 180 aa13.03□□□□□ -0.32
CLK4-210ENST00000522136 SIRPGQ9P1W8 387 aa13.03□□□□□ -0.32
CLK4-210ENST00000522136 MID2Q9UJV3 735 aa13.03□□□□□ -0.32
CLK4-210ENST00000522136 GMEB2Q9UKD1 530 aa13.03□□□□□ -0.32
CLK4-210ENST00000522136 ASB1Q9Y576 335 aa13.03□□□□□ -0.32
CLK4-210ENST00000522136 LAMA1P25391 3075 aa13.03□□□□□ -0.32
CLK4-210ENST00000522136 A0A1B0GTQ1 180 aa13.02□□□□□ -0.32
CLK4-210ENST00000522136 CCDC189A1A4V9 331 aa13.02□□□□□ -0.32
CLK4-210ENST00000522136 ARHGAP33O14559 1287 aa13.02□□□□□ -0.32
CLK4-210ENST00000522136 TAPBPO15533 448 aa13.02□□□□□ -0.32
CLK4-210ENST00000522136 IPO13O94829 963 aaKnown RBP13.02□□□□□ -0.32
CLK4-210ENST00000522136 ENO2P09104 434 aaPredicted RBP13.02□□□□□ -0.32
CLK4-210ENST00000522136 HIST1H2AGP0C0S8 130 aaPredicted RBP13.02□□□□□ -0.32
CLK4-210ENST00000522136 FGF3P11487 239 aaPredicted RBP13.02□□□□□ -0.32
CLK4-210ENST00000522136 NEFHP12036 1026 aa13.02□□□□□ -0.32
CLK4-210ENST00000522136 HIST1H2ADP20671 130 aa13.02□□□□□ -0.32
CLK4-210ENST00000522136 MDH1P40925 334 aaKnown RBP13.02□□□□□ -0.32
CLK4-210ENST00000522136 ARRB1P49407 418 aaPredicted RBP13.02□□□□□ -0.32
CLK4-210ENST00000522136 GRB7Q14451 532 aa13.02□□□□□ -0.32
CLK4-210ENST00000522136 KRT33BQ14525 404 aa13.02□□□□□ -0.32
CLK4-210ENST00000522136 CHI3L2Q15782 390 aa13.02□□□□□ -0.32
CLK4-210ENST00000522136 TBC1D21Q8IYX1 336 aa13.02□□□□□ -0.32
CLK4-210ENST00000522136 JPH3Q8WXH2 748 aaPredicted RBP13.02□□□□□ -0.32
CLK4-210ENST00000522136 RHBDF1Q96CC6 855 aa13.02□□□□□ -0.32
CLK4-210ENST00000522136 HIST1H2AHQ96KK5 128 aa13.02□□□□□ -0.32
CLK4-210ENST00000522136 HIST1H2AJQ99878 128 aa13.02□□□□□ -0.32
CLK4-210ENST00000522136 H2AFJQ9BTM1 129 aa13.02□□□□□ -0.32
CLK4-210ENST00000522136 GTPBP2Q9BX10 602 aaKnown RBP13.02□□□□□ -0.32
CLK4-210ENST00000522136 TRIT1Q9H3H1 467 aaKnown RBP13.02□□□□□ -0.32
CLK4-210ENST00000522136 PCDHGA5Q9Y5G8 931 aa13.02□□□□□ -0.32
CLK4-210ENST00000522136 GOLGA4Q13439 2230 aaKnown RBP13.02□□□□□ -0.33
CLK4-210ENST00000522136 LMO7DNF2Z398 122 aa13.01□□□□□ -0.33
CLK4-210ENST00000522136 BIRC5O15392 142 aa13.01□□□□□ -0.33
CLK4-210ENST00000522136 KLK8O60259 260 aa13.01□□□□□ -0.33
CLK4-210ENST00000522136 SLC16A8O95907 504 aa13.01□□□□□ -0.33
CLK4-210ENST00000522136 S100BP04271 92 aaPredicted RBP13.01□□□□□ -0.33
CLK4-210ENST00000522136 ANXA6P08133 673 aa13.01□□□□□ -0.33
CLK4-210ENST00000522136 ANXA5P08758 320 aa13.01□□□□□ -0.33
CLK4-210ENST00000522136 GDF5P43026 501 aa13.01□□□□□ -0.33
CLK4-210ENST00000522136 MAPK9P45984 424 aa13.01□□□□□ -0.33
CLK4-210ENST00000522136 PRKAA2P54646 552 aa13.01□□□□□ -0.33
CLK4-210ENST00000522136 NAGLUP54802 743 aa13.01□□□□□ -0.33
CLK4-210ENST00000522136 LAIR1Q6GTX8 287 aa13.01□□□□□ -0.33
CLK4-210ENST00000522136 DCUN1D3Q8IWE4 304 aa13.01□□□□□ -0.33
CLK4-210ENST00000522136 CCNYL1Q8N7R7 359 aa13.01□□□□□ -0.33
CLK4-210ENST00000522136 PDPRQ8NCN5 879 aa13.01□□□□□ -0.33
CLK4-210ENST00000522136 PPFIBP2Q8ND30 876 aa13.01□□□□□ -0.33
CLK4-210ENST00000522136 OR9A1PQ8NGU1 263 aa13.01□□□□□ -0.33
CLK4-210ENST00000522136 SLC37A2Q8TED4 501 aa13.01□□□□□ -0.33
CLK4-210ENST00000522136 CKAP2Q8WWK9 683 aa13.01□□□□□ -0.33
CLK4-210ENST00000522136 CXorf40BQ96DE9 158 aa13.01□□□□□ -0.33
CLK4-210ENST00000522136 CAMK1GQ96NX5 476 aa13.01□□□□□ -0.33
CLK4-210ENST00000522136 TMEM237Q96Q45 408 aa13.01□□□□□ -0.33
CLK4-210ENST00000522136 GATA5Q9BWX5 397 aaPredicted RBP13.01□□□□□ -0.33
CLK4-210ENST00000522136 NUSAP1Q9BXS6 441 aaKnown RBP13.01□□□□□ -0.33
CLK4-210ENST00000522136 ATG10Q9H0Y0 220 aa13.01□□□□□ -0.33
CLK4-210ENST00000522136 PTBP2Q9UKA9 531 aaKnown RBP13.01□□□□□ -0.33
CLK4-210ENST00000522136 PABPN1LA6NDY0 278 aaKnown RBP13.01□□□□□ -0.33
CLK4-210ENST00000522136 MYO1CO00159 1063 aa13.01□□□□□ -0.33
CLK4-210ENST00000522136 DLL1O00548 723 aa13.01□□□□□ -0.33
CLK4-210ENST00000522136 TRIM13O60858 407 aa13.01□□□□□ -0.33
CLK4-210ENST00000522136 GIMD1P0DJR0 217 aa13.01□□□□□ -0.33
CLK4-210ENST00000522136 ENGP17813 658 aa13.01□□□□□ -0.33
CLK4-210ENST00000522136 EPHA8P29322 1005 aaPredicted RBP13.01□□□□□ -0.33
CLK4-210ENST00000522136 EEF1DP29692 281 aaKnown RBP13.01□□□□□ -0.33
CLK4-210ENST00000522136 CCR10P46092 362 aa13.01□□□□□ -0.33
CLK4-210ENST00000522136 HSPA7P48741 367 aa13.01□□□□□ -0.33
CLK4-210ENST00000522136 ALDH18A1P54886 795 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms