RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 KCNS2Q9ULS6 477 aa3.26□□□□□ -1.89
HMGN1P28-201ENST00000521340 AMDHD2Q9Y303 409 aa3.26□□□□□ -1.89
HMGN1P28-201ENST00000521340 KNSTRNQ9Y448 316 aa3.26□□□□□ -1.89
HMGN1P28-201ENST00000521340 NACADO15069 1562 aa3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 A0A0G2JNG1 304 aa3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 ARHGEF37A1IGU5 675 aa3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 ANKRD66B4E2M5 251 aa3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 IPO8O15397 1037 aaKnown RBP3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 ZNHIT1O43257 154 aa3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 FCGR3BO75015 233 aa3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 SLC16A8O95907 504 aa3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 SYF2O95926 243 aaKnown RBP3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 TFAP2AP05549 437 aa3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 SNRNP70P08621 437 aaKnown RBP3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 CSF2RAP15509 400 aa3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 ACAT1P24752 427 aaKnown RBP3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 HNF4AP41235 474 aa3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 CASP3P42574 277 aa3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 PCYT1AP49585 367 aa3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 RGS7P49802 495 aa3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 KHKP50053 298 aa3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 THOP1P52888 689 aa3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 GSDMDP57764 484 aa3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 DLK1P80370 383 aa3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 DSC1Q08554 894 aa3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 GTF2H2Q13888 395 aa3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 KIR2DS5Q14953 304 aa3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 MORF4L2Q15014 288 aa3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 TWISTNBQ3B726 338 aaPredicted RBP3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 SFMBT2Q5VUG0 894 aa3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 KRT39Q6A163 491 aa3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 GTF2H2CQ6P1K8 395 aa3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 FAM122CQ6P4D5 195 aa3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 KLC3Q6P597 504 aa3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 ALKBH5Q6P6C2 394 aaKnown RBP3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 C11orf57Q6ZUT1 292 aaPredicted RBP3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 CNTN4Q8IWV2 1026 aa3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 SYCP3Q8IZU3 236 aa3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 SFRP1Q8N474 314 aa3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 ZNF441Q8N8Z8 693 aa3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 TRIML1Q8N9V2 468 aa3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 NPEPL1Q8NDH3 523 aa3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 OR7G3Q8NG95 312 aa3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 OR8H1Q8NGG4 311 aa3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 LNX1Q8TBB1 728 aaPredicted RBP3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 RNF128Q8TEB7 428 aa3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 SAP25Q8TEE9 199 aa3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 SSMEM1Q8WWF3 244 aa3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 MOB3AQ96BX8 217 aa3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 C17orf77Q96MU5 243 aa3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 SEPHS2Q99611 448 aa3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 FNDC11Q9BVV2 318 aa3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 SLC2A11Q9BYW1 496 aa3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 LRMDAQ9H2I8 198 aa3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 FN3KQ9H479 309 aa3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 CDH20Q9HBT6 801 aa3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 MIOSQ9NXC5 875 aa3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 DPP3Q9NY33 737 aa3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 ERAP1Q9NZ08 941 aa3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 SEPT10Q9P0V9 454 aa3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 GRIP1Q9Y3R0 1128 aa3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 SPIN1Q9Y657 262 aaPredicted RBP3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 BAZ1AQ9NRL2 1556 aaPredicted RBP3.25□□□□□ -1.89
HMGN1P28-201ENST00000521340 BICDL2A1A5D9 508 aa3.24□□□□□ -1.89
HMGN1P28-201ENST00000521340 HYKKA2RU49 373 aa3.24□□□□□ -1.89
HMGN1P28-201ENST00000521340 ASPDHA6ND91 283 aa3.24□□□□□ -1.89
HMGN1P28-201ENST00000521340 PROB1E7EW31 1015 aa3.24□□□□□ -1.89
HMGN1P28-201ENST00000521340 MEIS2O14770 477 aa3.24□□□□□ -1.89
HMGN1P28-201ENST00000521340 PSMA7O14818 248 aa3.24□□□□□ -1.89
HMGN1P28-201ENST00000521340 BMP10O95393 424 aa3.24□□□□□ -1.89
HMGN1P28-201ENST00000521340 MT-ND3P03897 115 aa3.24□□□□□ -1.89
HMGN1P28-201ENST00000521340 SAGP10523 405 aaPredicted RBP3.24□□□□□ -1.89
HMGN1P28-201ENST00000521340 CDK4P11802 303 aa3.24□□□□□ -1.89
HMGN1P28-201ENST00000521340 NR1D1P20393 614 aa3.24□□□□□ -1.89
HMGN1P28-201ENST00000521340 TMPOP42166 694 aaKnown RBP3.24□□□□□ -1.89
HMGN1P28-201ENST00000521340 MATR3P43243 847 aaKnown RBP eCLIP3.24□□□□□ -1.89
HMGN1P28-201ENST00000521340 CDX1P47902 265 aaPredicted RBP3.24□□□□□ -1.89
HMGN1P28-201ENST00000521340 MFAP3P55082 362 aa3.24□□□□□ -1.89
HMGN1P28-201ENST00000521340 TUBA1BP68363 451 aa3.24□□□□□ -1.89
HMGN1P28-201ENST00000521340 AP1B1Q10567 949 aa3.24□□□□□ -1.89
HMGN1P28-201ENST00000521340 COASYQ13057 564 aa3.24□□□□□ -1.89
HMGN1P28-201ENST00000521340 NPTX1Q15818 432 aa3.24□□□□□ -1.89
HMGN1P28-201ENST00000521340 CALCRLQ16602 461 aa3.24□□□□□ -1.89
HMGN1P28-201ENST00000521340 CTU2Q2VPK5 515 aaKnown RBP3.24□□□□□ -1.89
HMGN1P28-201ENST00000521340 UGT3A2Q3SY77 523 aa3.24□□□□□ -1.89
HMGN1P28-201ENST00000521340 ZNF260Q3ZCT1 412 aa3.24□□□□□ -1.89
HMGN1P28-201ENST00000521340 LACTB2Q53H82 288 aaPredicted RBP3.24□□□□□ -1.89
HMGN1P28-201ENST00000521340 CYB5D1Q6P9G0 228 aa3.24□□□□□ -1.89
HMGN1P28-201ENST00000521340 PRSS55Q6UWB4 352 aaPredicted RBP3.24□□□□□ -1.89
HMGN1P28-201ENST00000521340 BTNL8Q6UX41 500 aa3.24□□□□□ -1.89
HMGN1P28-201ENST00000521340 C9orf47Q6ZRZ4 202 aa3.24□□□□□ -1.89
HMGN1P28-201ENST00000521340 RBM23Q86U06 439 aaKnown RBP3.24□□□□□ -1.89
HMGN1P28-201ENST00000521340 HOOK3Q86VS8 718 aa3.24□□□□□ -1.89
HMGN1P28-201ENST00000521340 FAM114A1Q8IWE2 563 aa3.24□□□□□ -1.89
HMGN1P28-201ENST00000521340 UNC45BQ8IWX7 931 aa3.24□□□□□ -1.89
HMGN1P28-201ENST00000521340 ZNF611Q8N823 705 aa3.24□□□□□ -1.89
HMGN1P28-201ENST00000521340 VANGL1Q8TAA9 524 aaPredicted RBP3.24□□□□□ -1.89
HMGN1P28-201ENST00000521340 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.24□□□□□ -1.89
HMGN1P28-201ENST00000521340 GRHL3Q8TE85 626 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms