RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 CYP4F2P78329 520 aa13.74□□□□□ -0.21
VEGFA-221ENST00000520265 RHDQ02161 417 aa13.74□□□□□ -0.21
VEGFA-221ENST00000520265 DHX9Q08211 1270 aaKnown RBP13.74□□□□□ -0.21
VEGFA-221ENST00000520265 CTBP1Q13363 440 aa13.74□□□□□ -0.21
VEGFA-221ENST00000520265 CTSL3PQ5NE16 218 aa13.74□□□□□ -0.21
VEGFA-221ENST00000520265 C6orf15Q6UXA7 325 aaPredicted RBP13.74□□□□□ -0.21
VEGFA-221ENST00000520265 SYT10Q6XYQ8 523 aa13.74□□□□□ -0.21
VEGFA-221ENST00000520265 UNC5AQ6ZN44 842 aa13.74□□□□□ -0.21
VEGFA-221ENST00000520265 SYDE1Q6ZW31 735 aaPredicted RBP13.74□□□□□ -0.21
VEGFA-221ENST00000520265 DTX1Q86Y01 620 aa13.74□□□□□ -0.21
VEGFA-221ENST00000520265 KMT5CQ86Y97 462 aa13.74□□□□□ -0.21
VEGFA-221ENST00000520265 CILP2Q8IUL8 1156 aa13.74□□□□□ -0.21
VEGFA-221ENST00000520265 DCUN1D3Q8IWE4 304 aa13.74□□□□□ -0.21
VEGFA-221ENST00000520265 DENND6AQ8IWF6 608 aa13.74□□□□□ -0.21
VEGFA-221ENST00000520265 RAB42Q8N4Z0 105 aa13.74□□□□□ -0.21
VEGFA-221ENST00000520265 ESX1Q8N693 406 aa13.74□□□□□ -0.21
VEGFA-221ENST00000520265 GABPB2Q8TAK5 448 aaPredicted RBP13.74□□□□□ -0.21
VEGFA-221ENST00000520265 LPGAT1Q92604 370 aa13.74□□□□□ -0.21
VEGFA-221ENST00000520265 SLC41A2Q96JW4 573 aa13.74□□□□□ -0.21
VEGFA-221ENST00000520265 P2RY12Q9H244 342 aa13.74□□□□□ -0.21
VEGFA-221ENST00000520265 TFB2MQ9H5Q4 396 aaKnown RBP13.74□□□□□ -0.21
VEGFA-221ENST00000520265 IARS2Q9NSE4 1012 aaKnown RBP13.74□□□□□ -0.21
VEGFA-221ENST00000520265 PCYOX1Q9UHG3 505 aa13.74□□□□□ -0.21
VEGFA-221ENST00000520265 PILRAQ9UKJ1 303 aa13.74□□□□□ -0.21
VEGFA-221ENST00000520265 PTPRQQ9UMZ3 2332 aa13.74□□□□□ -0.21
VEGFA-221ENST00000520265 AHCTF1Q8WYP5 2266 aa13.74□□□□□ -0.21
VEGFA-221ENST00000520265 TMEM150CB9EJG8 249 aa13.73□□□□□ -0.21
VEGFA-221ENST00000520265 SPAG6O75602 509 aa13.73□□□□□ -0.21
VEGFA-221ENST00000520265 USP1O94782 785 aa13.73□□□□□ -0.21
VEGFA-221ENST00000520265 ESR1P03372 595 aa13.73□□□□□ -0.21
VEGFA-221ENST00000520265 NTRK1P04629 796 aa13.73□□□□□ -0.21
VEGFA-221ENST00000520265 CHRM5P08912 532 aaPredicted RBP13.73□□□□□ -0.21
VEGFA-221ENST00000520265 CCNYL3P0C7X3 344 aa13.73□□□□□ -0.21
VEGFA-221ENST00000520265 PKMP14618 531 aaKnown RBP13.73□□□□□ -0.21
VEGFA-221ENST00000520265 ST6GAL1P15907 406 aa13.73□□□□□ -0.21
VEGFA-221ENST00000520265 UGT2B7P16662 529 aa13.73□□□□□ -0.21
VEGFA-221ENST00000520265 SLC1A2P43004 574 aa13.73□□□□□ -0.21
VEGFA-221ENST00000520265 PTGIRP43119 386 aa13.73□□□□□ -0.21
VEGFA-221ENST00000520265 MRPS25P82663 173 aaKnown RBP13.73□□□□□ -0.21
VEGFA-221ENST00000520265 C2orf54Q08AI8 447 aa13.73□□□□□ -0.21
VEGFA-221ENST00000520265 TSTA3Q13630 321 aaPredicted RBP13.73□□□□□ -0.21
VEGFA-221ENST00000520265 TYSND1Q2T9J0 566 aa13.73□□□□□ -0.21
VEGFA-221ENST00000520265 C16orf46Q6P387 395 aa13.73□□□□□ -0.21
VEGFA-221ENST00000520265 SPESP1Q6UW49 350 aa13.73□□□□□ -0.21
VEGFA-221ENST00000520265 KCNMB4Q86W47 210 aa13.73□□□□□ -0.21
VEGFA-221ENST00000520265 PDIK1LQ8N165 341 aa13.73□□□□□ -0.21
VEGFA-221ENST00000520265 ZBTB2Q8N680 514 aa13.73□□□□□ -0.21
VEGFA-221ENST00000520265 CALML6Q8TD86 181 aa13.73□□□□□ -0.21
VEGFA-221ENST00000520265 IL17FQ96PD4 163 aa13.73□□□□□ -0.21
VEGFA-221ENST00000520265 TCF12Q99081 682 aa13.73□□□□□ -0.21
VEGFA-221ENST00000520265 FAM167BQ9BTA0 163 aa13.73□□□□□ -0.21
VEGFA-221ENST00000520265 C1GALT1Q9NS00 363 aa13.73□□□□□ -0.21
VEGFA-221ENST00000520265 INTS10Q9NVR2 710 aaKnown RBP13.73□□□□□ -0.21
VEGFA-221ENST00000520265 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.73□□□□□ -0.21
VEGFA-221ENST00000520265 CHMP2BQ9UQN3 213 aa13.73□□□□□ -0.21
VEGFA-221ENST00000520265 LOC101059948A0A1B0GTJ6 334 aa13.72□□□□□ -0.21
VEGFA-221ENST00000520265 EFCAB8A8MWE9 144 aa13.72□□□□□ -0.21
VEGFA-221ENST00000520265 SCRG1O75711 98 aa13.72□□□□□ -0.21
VEGFA-221ENST00000520265 FGF5P12034 268 aa13.72□□□□□ -0.21
VEGFA-221ENST00000520265 WT1P19544 449 aaPredicted RBP13.72□□□□□ -0.21
VEGFA-221ENST00000520265 CYP2A7P20853 494 aa13.72□□□□□ -0.21
VEGFA-221ENST00000520265 DLSTP36957 453 aa13.72□□□□□ -0.21
VEGFA-221ENST00000520265 ITGA8P53708 1063 aa13.72□□□□□ -0.21
VEGFA-221ENST00000520265 TUBB4BP68371 445 aa13.72□□□□□ -0.21
VEGFA-221ENST00000520265 MPP1Q00013 466 aa13.72□□□□□ -0.21
VEGFA-221ENST00000520265 TUBB2AQ13885 445 aa13.72□□□□□ -0.21
VEGFA-221ENST00000520265 CRYMQ14894 314 aa13.72□□□□□ -0.21
VEGFA-221ENST00000520265 MORF4L2Q15014 288 aa13.72□□□□□ -0.21
VEGFA-221ENST00000520265 DEFB110Q30KQ9 67 aa13.72□□□□□ -0.21
VEGFA-221ENST00000520265 TTLL9Q3SXZ7 439 aa13.72□□□□□ -0.21
VEGFA-221ENST00000520265 HSP90AA5PQ58FG0 334 aa13.72□□□□□ -0.21
VEGFA-221ENST00000520265 ZNF789Q5FWF6 425 aa13.72□□□□□ -0.21
VEGFA-221ENST00000520265 PLEKHS1Q5SXH7 462 aa13.72□□□□□ -0.21
VEGFA-221ENST00000520265 ARMC3Q5W041 872 aa13.72□□□□□ -0.21
VEGFA-221ENST00000520265 PWWP2BQ6NUJ5 590 aa13.72□□□□□ -0.21
VEGFA-221ENST00000520265 UNC5DQ6UXZ4 953 aa13.72□□□□□ -0.21
VEGFA-221ENST00000520265 CENPUQ71F23 418 aa13.72□□□□□ -0.21
VEGFA-221ENST00000520265 TIPARPQ7Z3E1 657 aaKnown RBP13.72□□□□□ -0.21
VEGFA-221ENST00000520265 ADGRF3Q8IZF5 1079 aa13.72□□□□□ -0.21
VEGFA-221ENST00000520265 D2HGDHQ8N465 521 aa13.72□□□□□ -0.21
VEGFA-221ENST00000520265 LMNTD1Q8N9Z9 388 aa13.72□□□□□ -0.21
VEGFA-221ENST00000520265 SLC39A7Q92504 469 aa13.72□□□□□ -0.21
VEGFA-221ENST00000520265 SLCO2A1Q92959 643 aa13.72□□□□□ -0.21
VEGFA-221ENST00000520265 CLIP3Q96DZ5 547 aa13.72□□□□□ -0.21
VEGFA-221ENST00000520265 SNF8Q96H20 258 aa13.72□□□□□ -0.21
VEGFA-221ENST00000520265 PWWP2AQ96N64 755 aa13.72□□□□□ -0.21
VEGFA-221ENST00000520265 EFHD1Q9BUP0 239 aa13.72□□□□□ -0.21
VEGFA-221ENST00000520265 TUBB2BQ9BVA1 445 aa13.72□□□□□ -0.21
VEGFA-221ENST00000520265 LATS2Q9NRM7 1088 aa13.72□□□□□ -0.21
VEGFA-221ENST00000520265 SPHK1Q9NYA1 384 aa13.72□□□□□ -0.21
VEGFA-221ENST00000520265 RNF14Q9UBS8 474 aa13.72□□□□□ -0.21
VEGFA-221ENST00000520265 CROTQ9UKG9 612 aa13.72□□□□□ -0.21
VEGFA-221ENST00000520265 CDYLQ9Y232 598 aa13.72□□□□□ -0.21
VEGFA-221ENST00000520265 TMEM184BQ9Y519 407 aaPredicted RBP13.72□□□□□ -0.21
VEGFA-221ENST00000520265 NFS1Q9Y697 457 aa13.72□□□□□ -0.21
VEGFA-221ENST00000520265 ITPR1Q14643 2758 aa13.71□□□□□ -0.21
VEGFA-221ENST00000520265 NBEAQ8NFP9 2946 aa13.71□□□□□ -0.21
VEGFA-221ENST00000520265 ZCWPW2A0A1B0GU75 182 aa13.71□□□□□ -0.21
VEGFA-221ENST00000520265 ZNF891A8MT65 544 aaPredicted RBP13.71□□□□□ -0.21
VEGFA-221ENST00000520265 ERVH48-1M5A8F1 160 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms