RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 ATP1A4Q13733 1029 aa8.36□□□□□ -1.07
PABPC1-202ENST00000517403 TUBB2AQ13885 445 aa8.36□□□□□ -1.07
PABPC1-202ENST00000517403 SLC9A5Q14940 896 aa8.36□□□□□ -1.07
PABPC1-202ENST00000517403 UGT8Q16880 541 aa8.36□□□□□ -1.07
PABPC1-202ENST00000517403 ZRANB3Q5FWF4 1079 aa8.36□□□□□ -1.07
PABPC1-202ENST00000517403 ITPRIPL1Q6GPH6 555 aa8.36□□□□□ -1.07
PABPC1-202ENST00000517403 CCDC70Q6NSX1 233 aa8.36□□□□□ -1.07
PABPC1-202ENST00000517403 OOSP2Q86WS3 158 aa8.36□□□□□ -1.07
PABPC1-202ENST00000517403 APLFQ8IW19 511 aaPredicted RBP8.36□□□□□ -1.07
PABPC1-202ENST00000517403 RBM12BQ8IXT5 1001 aaKnown RBP8.36□□□□□ -1.07
PABPC1-202ENST00000517403 DSELQ8IZU8 1212 aa8.36□□□□□ -1.07
PABPC1-202ENST00000517403 KRT222Q8N1A0 295 aa8.36□□□□□ -1.07
PABPC1-202ENST00000517403 ACVR1CQ8NER5 493 aa8.36□□□□□ -1.07
PABPC1-202ENST00000517403 TTC25Q96NG3 672 aa8.36□□□□□ -1.07
PABPC1-202ENST00000517403 CATSPER2Q96P56 530 aa8.36□□□□□ -1.07
PABPC1-202ENST00000517403 COPS8Q99627 209 aa8.36□□□□□ -1.07
PABPC1-202ENST00000517403 TUBB2BQ9BVA1 445 aa8.36□□□□□ -1.07
PABPC1-202ENST00000517403 RBCK1Q9BYM8 510 aa8.36□□□□□ -1.07
PABPC1-202ENST00000517403 ZCCHC2Q9C0B9 1178 aaKnown RBP8.36□□□□□ -1.07
PABPC1-202ENST00000517403 SLC6A16Q9GZN6 736 aa8.36□□□□□ -1.07
PABPC1-202ENST00000517403 SPRTNQ9H040 489 aaPredicted RBP8.36□□□□□ -1.07
PABPC1-202ENST00000517403 TSPAN10Q9H1Z9 355 aaPredicted RBP8.36□□□□□ -1.07
PABPC1-202ENST00000517403 ETNK1Q9HBU6 452 aa8.36□□□□□ -1.07
PABPC1-202ENST00000517403 ZBTB20Q9HC78 741 aaPredicted RBP8.36□□□□□ -1.07
PABPC1-202ENST00000517403 ACTR10Q9NZ32 417 aa8.36□□□□□ -1.07
PABPC1-202ENST00000517403 ANKMY1Q9P2S6 941 aa8.36□□□□□ -1.07
PABPC1-202ENST00000517403 IMPACTQ9P2X3 320 aa8.36□□□□□ -1.07
PABPC1-202ENST00000517403 VTI1BQ9UEU0 232 aa8.36□□□□□ -1.07
PABPC1-202ENST00000517403 POLHQ9Y253 713 aa8.36□□□□□ -1.07
PABPC1-202ENST00000517403 MAN2B2Q9Y2E5 1009 aa8.36□□□□□ -1.07
PABPC1-202ENST00000517403 CROCCQ5TZA2 2017 aa8.36□□□□□ -1.07
PABPC1-202ENST00000517403 TCRBV7S3A2A0A539 114 aa8.35□□□□□ -1.07
PABPC1-202ENST00000517403 PIPSLA2A3N6 862 aa8.35□□□□□ -1.07
PABPC1-202ENST00000517403 GSAPA4D1B5 854 aa8.35□□□□□ -1.07
PABPC1-202ENST00000517403 C2orf81A6NN90 581 aa8.35□□□□□ -1.07
PABPC1-202ENST00000517403 ESPNB1AK53 854 aa8.35□□□□□ -1.07
PABPC1-202ENST00000517403 MEN1O00255 615 aa8.35□□□□□ -1.07
PABPC1-202ENST00000517403 CPNE3O75131 537 aaKnown RBP8.35□□□□□ -1.07
PABPC1-202ENST00000517403 SEMA7AO75326 666 aa8.35□□□□□ -1.07
PABPC1-202ENST00000517403 RFPL1O75677 317 aa8.35□□□□□ -1.07
PABPC1-202ENST00000517403 KLF7O75840 302 aaPredicted RBP8.35□□□□□ -1.07
PABPC1-202ENST00000517403 ZBTB11O95625 1053 aaPredicted RBP8.35□□□□□ -1.07
PABPC1-202ENST00000517403 GOT2P00505 430 aaKnown RBP8.35□□□□□ -1.07
PABPC1-202ENST00000517403 UMODP07911 640 aa8.35□□□□□ -1.07
PABPC1-202ENST00000517403 VCLP18206 1134 aa8.35□□□□□ -1.07
PABPC1-202ENST00000517403 ITGALP20701 1170 aa8.35□□□□□ -1.07
PABPC1-202ENST00000517403 GNLYP22749 145 aa8.35□□□□□ -1.07
PABPC1-202ENST00000517403 MCM3P25205 808 aa8.35□□□□□ -1.07
PABPC1-202ENST00000517403 PSMB5P28074 263 aa8.35□□□□□ -1.07
PABPC1-202ENST00000517403 CCR7P32248 378 aa8.35□□□□□ -1.07
PABPC1-202ENST00000517403 CYLC1P35663 651 aaPredicted RBP8.35□□□□□ -1.07
PABPC1-202ENST00000517403 EFNA3P52797 238 aa8.35□□□□□ -1.07
PABPC1-202ENST00000517403 CSE1LP55060 971 aaKnown RBP8.35□□□□□ -1.07
PABPC1-202ENST00000517403 ACVR1Q04771 509 aa8.35□□□□□ -1.07
PABPC1-202ENST00000517403 SKOR2Q2VWA4 1001 aaPredicted RBP8.35□□□□□ -1.07
PABPC1-202ENST00000517403 ODF2Q5BJF6 829 aa8.35□□□□□ -1.07
PABPC1-202ENST00000517403 C1orf189Q5VU69 101 aa8.35□□□□□ -1.07
PABPC1-202ENST00000517403 TCTN3Q6NUS6 607 aa8.35□□□□□ -1.07
PABPC1-202ENST00000517403 UNC5AQ6ZN44 842 aa8.35□□□□□ -1.07
PABPC1-202ENST00000517403 ASB18Q6ZVZ8 466 aa8.35□□□□□ -1.07
PABPC1-202ENST00000517403 COX15Q7KZN9 410 aa8.35□□□□□ -1.07
PABPC1-202ENST00000517403 BZW1Q7L1Q6 419 aaKnown RBP8.35□□□□□ -1.07
PABPC1-202ENST00000517403 TAX1BP1Q86VP1 789 aa8.35□□□□□ -1.07
PABPC1-202ENST00000517403 KMT5CQ86Y97 462 aa8.35□□□□□ -1.07
PABPC1-202ENST00000517403 TMEM126BQ8IUX1 230 aa8.35□□□□□ -1.07
PABPC1-202ENST00000517403 SYTL1Q8IYJ3 562 aa8.35□□□□□ -1.07
PABPC1-202ENST00000517403 AGGF1Q8N302 714 aaeCLIP8.35□□□□□ -1.07
PABPC1-202ENST00000517403 C2orf73Q8N5S3 287 aaPredicted RBP8.35□□□□□ -1.07
PABPC1-202ENST00000517403 RBMXL3Q8N7X1 1067 aaKnown RBP8.35□□□□□ -1.07
PABPC1-202ENST00000517403 SPC24Q8NBT2 197 aa8.35□□□□□ -1.07
PABPC1-202ENST00000517403 FDCSPQ8NFU4 85 aa8.35□□□□□ -1.07
PABPC1-202ENST00000517403 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.35□□□□□ -1.07
PABPC1-202ENST00000517403 C1orf54Q8WWF1 131 aa8.35□□□□□ -1.07
PABPC1-202ENST00000517403 MR1Q95460 341 aa8.35□□□□□ -1.07
PABPC1-202ENST00000517403 FCRL4Q96PJ5 515 aa8.35□□□□□ -1.07
PABPC1-202ENST00000517403 FERD3LQ96RJ6 166 aa8.35□□□□□ -1.07
PABPC1-202ENST00000517403 SRPK1Q96SB4 655 aaKnown RBP8.35□□□□□ -1.07
PABPC1-202ENST00000517403 CD180Q99467 661 aa8.35□□□□□ -1.07
PABPC1-202ENST00000517403 CCM2Q9BSQ5 444 aa8.35□□□□□ -1.07
PABPC1-202ENST00000517403 TRIT1Q9H3H1 467 aaKnown RBP8.35□□□□□ -1.07
PABPC1-202ENST00000517403 LATS2Q9NRM7 1088 aa8.35□□□□□ -1.07
PABPC1-202ENST00000517403 SOHLH2Q9NX45 425 aa8.35□□□□□ -1.07
PABPC1-202ENST00000517403 GALPQ9UBC7 116 aa8.35□□□□□ -1.07
PABPC1-202ENST00000517403 DHCR7Q9UBM7 475 aaKnown RBP8.35□□□□□ -1.07
PABPC1-202ENST00000517403 PADI1Q9ULC6 663 aa8.35□□□□□ -1.07
PABPC1-202ENST00000517403 NTNG1Q9Y2I2 539 aa8.35□□□□□ -1.07
PABPC1-202ENST00000517403 NFS1Q9Y697 457 aa8.35□□□□□ -1.07
PABPC1-202ENST00000517403 UBA6A0AVT1 1052 aaPredicted RBP8.34□□□□□ -1.07
PABPC1-202ENST00000517403 C21orf140B9A014 251 aa8.34□□□□□ -1.07
PABPC1-202ENST00000517403 ZNF749O43361 778 aa8.34□□□□□ -1.07
PABPC1-202ENST00000517403 KRT86O43790 486 aa8.34□□□□□ -1.07
PABPC1-202ENST00000517403 KCNJ13O60928 360 aa8.34□□□□□ -1.07
PABPC1-202ENST00000517403 CHRM5P08912 532 aaPredicted RBP8.34□□□□□ -1.07
PABPC1-202ENST00000517403 CDH3P22223 829 aa8.34□□□□□ -1.07
PABPC1-202ENST00000517403 MSNP26038 577 aaKnown RBP8.34□□□□□ -1.07
PABPC1-202ENST00000517403 PKLRP30613 574 aa8.34□□□□□ -1.07
PABPC1-202ENST00000517403 BDKRB1P46663 353 aa8.34□□□□□ -1.07
PABPC1-202ENST00000517403 EIF1AXP47813 144 aaKnown RBP8.34□□□□□ -1.07
PABPC1-202ENST00000517403 ACY1Q03154 408 aa8.34□□□□□ -1.07
PABPC1-202ENST00000517403 MRPL49Q13405 166 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms