RNA–Protein interactions for RNA: ENST00000516259.1

RNU6-390P-201, Transcript of RNA, U6 small nuclear 390, pseudogene, humanhuman

BASIC

Gene RNU6-390P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-390P-201ENST00000516259 IL1RAPL2Q9NP60 686 aa3.12□□□□□ -1.91
RNU6-390P-201ENST00000516259 TBC1D7Q9P0N9 293 aa3.12□□□□□ -1.91
RNU6-390P-201ENST00000516259 POLLQ9UGP5 575 aa3.12□□□□□ -1.91
RNU6-390P-201ENST00000516259 TAF1P21675 1872 aa3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 TTC3P53804 2025 aa3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 TRAV24A0A0B4J272 114 aa3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 SDR42E2A6NKP2 422 aa3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 HNRNPCL2B2RXH8 293 aa3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 INSIG1O15503 277 aa3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 SMAD6O43541 496 aaKnown RBP3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 FMO6PO60774 539 aa3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 MOCS3O95396 460 aa3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 PPP1R3DO95685 299 aa3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 BMP15O95972 392 aa3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 IGHV4-39P01824 125 aa3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 IGKV2-30P06310 120 aa3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 FAM58BPP0C7Q3 252 aa3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 GP1BBP13224 206 aa3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 EEF2P13639 858 aaKnown RBP3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 ITGA2P17301 1181 aa3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 GNAZP19086 355 aa3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 CD22P20273 847 aa3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 MPZP25189 248 aa3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 OAS2P29728 719 aaKnown RBP3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 SOAT1P35610 550 aa3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 IL15P40933 162 aaPredicted RBP3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 CDX1P47902 265 aaPredicted RBP3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 AMPHP49418 695 aa3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 GMPSP49915 693 aaPredicted RBP3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 ART1P52961 327 aa3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 MFAP3P55082 362 aa3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 DSCR9P59020 149 aa3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 LINC00205P59089 165 aa3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 ZBTB17Q13105 803 aa3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 KEAP1Q14145 624 aa3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 SLMAPQ14BN4 828 aa3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 PDLIM3Q53GG5 364 aaPredicted RBP3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 TXNRD3NBQ6F5E7 133 aa3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 C11orf63Q6NUN7 778 aa3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 ZNF449Q6P9G9 518 aa3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 IYDQ6PHW0 289 aa3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 UNQ6126/PRO20091Q6UXV3 157 aa3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 PIWIL3Q7Z3Z3 882 aaKnown RBP3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 SPATA21Q7Z572 469 aa3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 RBM23Q86U06 439 aaKnown RBP3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 LONP2Q86WA8 852 aa3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 IQCA1Q86XH1 822 aa3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 TMCO5AQ8N6Q1 288 aa3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 TRIML1Q8N9V2 468 aa3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 OR5M8Q8NGP6 311 aa3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 SCARB1Q8WTV0 552 aa3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 SEMA4DQ92854 862 aa3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 PTP4A1Q93096 173 aa3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 SNRNP40Q96DI7 357 aaKnown RBP3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 C17orf77Q96MU5 243 aa3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 PANK2Q9BZ23 570 aa3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 FAM129AQ9BZQ8 928 aa3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 MTMR12Q9C0I1 747 aa3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 LMAN1LQ9HAT1 526 aa3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 ZBTB20Q9HC78 741 aaPredicted RBP3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 Q9N2K0 584 aa3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 OCIAD1Q9NX40 245 aa3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 CHCHD3Q9NX63 227 aaKnown RBP3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 B3GAT1Q9P2W7 334 aa3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 SPIN1Q9Y657 262 aaPredicted RBP3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 IGSF1Q8N6C5 1336 aa3.11□□□□□ -1.91
RNU6-390P-201ENST00000516259 A0A0U1RQK1 487 aa3.1□□□□□ -1.91
RNU6-390P-201ENST00000516259 ZNF320A2RRD8 509 aa3.1□□□□□ -1.91
RNU6-390P-201ENST00000516259 HYKKA2RU49 373 aa3.1□□□□□ -1.91
RNU6-390P-201ENST00000516259 MEIS2O14770 477 aa3.1□□□□□ -1.91
RNU6-390P-201ENST00000516259 AP5Z1O43299 807 aa3.1□□□□□ -1.91
RNU6-390P-201ENST00000516259 BAG4O95429 457 aaKnown RBP3.1□□□□□ -1.91
RNU6-390P-201ENST00000516259 LIPFP07098 398 aa3.1□□□□□ -1.91
RNU6-390P-201ENST00000516259 ACAA1P09110 424 aaPredicted RBP3.1□□□□□ -1.91
RNU6-390P-201ENST00000516259 SUPT20HL2P0C7V6 817 aa3.1□□□□□ -1.91
RNU6-390P-201ENST00000516259 SPP1P10451 314 aa3.1□□□□□ -1.91
RNU6-390P-201ENST00000516259 FGF5P12034 268 aa3.1□□□□□ -1.91
RNU6-390P-201ENST00000516259 CDH1P12830 882 aa3.1□□□□□ -1.91
RNU6-390P-201ENST00000516259 MYL6BP14649 208 aa3.1□□□□□ -1.91
RNU6-390P-201ENST00000516259 CYP11B2P19099 503 aa3.1□□□□□ -1.91
RNU6-390P-201ENST00000516259 RGS7P49802 495 aa3.1□□□□□ -1.91
RNU6-390P-201ENST00000516259 KHKP50053 298 aa3.1□□□□□ -1.91
RNU6-390P-201ENST00000516259 FOXG1P55316 489 aaPredicted RBP3.1□□□□□ -1.91
RNU6-390P-201ENST00000516259 SNU13P55769 128 aaKnown RBP3.1□□□□□ -1.91
RNU6-390P-201ENST00000516259 STX1BP61266 288 aa3.1□□□□□ -1.91
RNU6-390P-201ENST00000516259 ISL1P61371 349 aa3.1□□□□□ -1.91
RNU6-390P-201ENST00000516259 RPS18P62269 152 aaKnown RBP3.1□□□□□ -1.91
RNU6-390P-201ENST00000516259 ASIC1P78348 528 aa3.1□□□□□ -1.91
RNU6-390P-201ENST00000516259 YWHAHQ04917 246 aaPredicted RBP3.1□□□□□ -1.91
RNU6-390P-201ENST00000516259 KLC1Q07866 573 aa3.1□□□□□ -1.91
RNU6-390P-201ENST00000516259 MZT1Q08AG7 82 aa3.1□□□□□ -1.91
RNU6-390P-201ENST00000516259 ILF3Q12906 894 aaKnown RBP eCLIP3.1□□□□□ -1.91
RNU6-390P-201ENST00000516259 TNK1Q13470 666 aa3.1□□□□□ -1.91
RNU6-390P-201ENST00000516259 SF3B4Q15427 424 aaKnown RBP eCLIP3.1□□□□□ -1.91
RNU6-390P-201ENST00000516259 NHSL2Q5HYW2 709 aa3.1□□□□□ -1.91
RNU6-390P-201ENST00000516259 GLRA4Q5JXX5 417 aa3.1□□□□□ -1.91
RNU6-390P-201ENST00000516259 ELFN2Q5R3F8 820 aa3.1□□□□□ -1.91
RNU6-390P-201ENST00000516259 CYP4A22Q5TCH4 519 aa3.1□□□□□ -1.91
RNU6-390P-201ENST00000516259 PLBD1Q6P4A8 553 aa3.1□□□□□ -1.91
RNU6-390P-201ENST00000516259 SLC27A1Q6PCB7 646 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms